mRNA_E-fasciculatus_F_contig1211.1646.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1211.1646.1
Unique NamemRNA_E-fasciculatus_F_contig1211.1646.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: D7G8K0_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8K0_ECTSI)

HSP 1 Score: 650 bits (1677), Expect = 4.750e-229
Identity = 382/592 (64.53%), Postives = 388/592 (65.54%), Query Frame = 1
Query:    1 MLMDACGCDLPDEGRRADVSGRGLVSVVGEDMSFFVRLQAVDAGDNSLPFDSFLDLPRLDELRLPCNNIRDIDGRKILAQLQFGGGDGKSGTGYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLADLPVAMARFPALQKLSLERNQLESDAAFDVLSRLPGLRELNLAFNYFTGINLDPGIAEQAFPLLEALDLGFNFIGSERDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLIAESDRIRGDYANYPIEVITELPRIRQTRGXXXXXXXXXXRPYGDTGVTMVDEGCLPPASAFRDAGNRSLFRFERKPSGDGSGDGDAPDDNIVEATLRLARESKNRATLAASR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDEVLTSMGAGMDRMVLENRARENNNGAQA-KPELSTIIRTVNAVLDETEY 1230
            MLMDACGCDLPDEGRRADVSGRGLVSVV EDMSFFVRLQAVDAGDNSLPFDSFLDLPRL+ELRLPCN+IRDIDGRKIL QLQ GGGDG SG GYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGL DLPVAMARFP LQKLSLERNQLESDA FDVLSRLPGLRELNLAFNYFTGINLD  IAEQAFPLLEALDLGFNFIGSE DVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKL+AESDRIRGDYA+ PIEVITELPRIRQTRGXXXXXXXXXXRPY DTGVTMVDEGCLPPAS FRD+GNR+LFRFERKPSG  SGDGDAPDDNIVEATLRLARESKNR  LAASR                                                                                                                                                                                     VDEVLTSMGAGMDRMVLE RARENNNG QA KPELS IIRTVN VLDETEY
Sbjct:    1 MLMDACGCDLPDEGRRADVSGRGLVSVVREDMSFFVRLQAVDAGDNSLPFDSFLDLPRLEELRLPCNSIRDIDGRKILTQLQLGGGDGNSGNGYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLVDLPVAMARFPVLQKLSLERNQLESDAVFDVLSRLPGLRELNLAFNYFTGINLDLDIAEQAFPLLEALDLGFNFIGSESDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLVAESDRIRGDYASCPIEVITELPRIRQTRGXXXXXXXXXXRPYCDTGVTMVDEGCLPPASTFRDSGNRTLFRFERKPSGS-SGDGDAPDDNIVEATLRLARESKNRVALAASRSAAKAAAIGVQDCTFLTSVERQQEDNHDAGPAANGGATDERENEAGADVGRLLGQEAGAVNGMSTRLLRGPIDPMVRGDPVKLRMALTTLRYTLKHPVTSSLDVQWQKQXXXXXXXXXXXLTRGKDCGAGRKTAAARARQLPRRPYQLLKPSHQVGFCARLLDEPTKDGRGGGGGDGVLGRVDEVLTSMGAGMDRMVLEKRARENNNGTQAAKPELSAIIRTVNEVLDETEY 591          
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: A0A836C9W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W6_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.150e-67
Identity = 147/374 (39.30%), Postives = 199/374 (53.21%), Query Frame = 1
Query:    4 LMDACGCDLPDEGRRADVSGRGLVSVVGEDMSFFVRLQAVDAGDNSLPFDSFLDLPRLDELRLPCNNIRDIDGRKILAQLQFGGGDGKSGTGYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLADLPVAMARFPALQKLSLERNQLESDAAFDVLSRLPGLRELNLAFNYFTGINLDPGIAEQAFPLLEALDLGFNFIGSERDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLIAESDRIRGDYANYPIEVITELPRIRQTRGXXXXXXXXXXRPYGDTGVTMVDEGCLPPASAFRDAGNRSLFRFERKPSGDGSGDGDAPDDNIVEATLRLARESKNRATLAASRVDEV--LTSMGAGMD 1119
            +++  G DLPD  RR+D+SG     VV +D+ +F +LQ +DAGDNSL    F  L +L ELRL CN I       +                Y  L RLDLSYN+LSG A++ L  LP L  LDL+CNGL  LP  +A  P L+ L LERNQLE       L+ LP LREL+LAFNYF  I              EALDL FN+IG++ D + +VL  +L R+ILYGNPL GP+GED  G+ +E L   +DR R  ++   +E ITE+PR +  R                  +T+V E  +P +   +  GN+++F+FE   S +      A   +I  ATLR     K R+  A  R  ++  LT++  G D
Sbjct:  162 ILEGSGVDLPDGARRSDISGGNFTEVVQDDLGYFNKLQELDAGDNSLSLSCFACLQQLHELRLQCNGITAPPAPPLPP------------ASYPALTRLDLSYNALSGAAIAQLAQLPVLKYLDLSCNGLTSLPAELAALPCLECLVLERNQLEGGEVMATLATLPVLRELSLAFNYFAAI--------------EALDLAFNYIGAQADAMPLVLLPKLARVILYGNPLCGPSGEDLSGITIEGLEDAADRARDGWSVPLLEFITEMPRPKHERAGLKNSRRRMYCEMTRAPITLVSEAPVPASRDLKATGNKAVFKFEEARSDN------AAAMDIATATLRAME--KQRSVEAQRRAQDLTFLTAIDMGGD 501          
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: A0A7S3XTX8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTX8_HETAK)

HSP 1 Score: 232 bits (592), Expect = 9.000e-66
Identity = 136/324 (41.98%), Postives = 181/324 (55.86%), Query Frame = 1
Query:    4 LMDACGCDLPDEGRRADVSGRGLVSVVGEDMSFFVRLQAVDAGDNSLPFDSFLDLPRLDELRLPCNNIRDIDGRKILAQLQFGGGDGKSGTGYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLADLPVAMARFPALQKLSLERNQLESDAAFDVLSRLPGLRELNLAFNYFTGINLDPG--IAEQAFPLLEALDLGFNFIGSERDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLIAESDRIRGDYANYPIEVITELPRIRQTRGXXXXXXXXXXRPYGDTGVTMVDEGCLPPASAFRDAGNRSLFRFERK 969
            L+ A G   PDE RRAD SG+G   V   D+ +FVRL  +D  +N L  + F  LPRL +LRL  N +  +  ++                GY  L RLDLSYN++   AL  L  LP L  LDLT NGLA+LP A+A F  L+ L+LE NQ + +    VL+ +P LREL LAFN+   I+  P    AE  FP L+ LDL FN++ +ERDV+ +     L R+ILYGNPLAGPTGED  G CV + +  ++R R  ++  P+EV+ E PR R              RPY D    +VDE  LP    FR+AGNR +   +++
Sbjct:  105 LLQAAGVQFPDEARRADASGKGYEEVNTADLGYFVRLATLDVSENHLALEWFCRLPRLKDLRLAYNGLTALGPQE----------------GYPALMRLDLSYNAVEPAALGCLAALPRLRALDLTSNGLAELPDALAGFHTLEILTLEHNQFDGEIPL-VLAEIPKLRELYLAFNF---IDTAPAECAAEGQFPALDLLDLAFNYVAAERDVLPLAALPVLTRVILYGNPLAGPTGEDPAGACVRRFLHLAERARQGWSARPLEVVLEQPRRRAAE-------RVNRRPYRDVETVVVDEAPLPTGGEFREAGNRLMLGRQKR 401          
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: A0A7S4E570_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E570_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.780e-44
Identity = 117/335 (34.93%), Postives = 167/335 (49.85%), Query Frame = 1
Query:    1 MLMDACGCDLPDEGRRADVSGRGLVSVVGEDMSFFVRLQAVDAGDNS-LPFDSFLDLPRLDELRLPCNNIRDIDGRKILAQLQFGGGDGKSGTGYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLADLPVAMARFPALQKLSLERNQLESDAAFDVLSRLPGLRELNLAFNYFTGINLDPGIAE-------QAFPLLEALDLGFNFIGSERDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLIAESDRIRGDYANYPIEVITELPRIRQTRGXXXXXXXXXX-RPYGDTGVTMVDEGCLPPASAFRDAGNRSLFRFERKPSG 978
            +L+DACG + PDEG RADVSGR    V   D+ +F  L  VDA DN  LP + F  LPRL +LR   N+        + + +        S   + +L  LDLSYN+ +   +S L  +P L DLDLT NGL +LP   + F +L+KL LERN+L+ D                      +   +D  +AE       +    L ALDL  N I SE+D+  + +  +L++L LYGNPL G TGED  G  V  L+  + + R  +    ++V TE+PR R  RG           R +   GV  + E  +P A+ FR+ G+++L     K +G
Sbjct:  127 LLLDACGVEFPDEGHRADVSGRHATEVSSTDLEYFPNLSWVDASDNPRLPLEDFGSLPRLKDLRFAANSW------SVCSSV--------SEDWFPRLLVLDLSYNTATLDGISQLVTMPRLRDLDLTGNGLVELPDVFSDFQSLEKLFLERNRLQGDXXXXXXXXXXXXXXXXXXXXVTSTPTID-AMAEATSLDHTEILAELVALDLAHNHIRSEKDIDDLTVLPKLEQLSLYGNPLLGATGEDPTGETVRTLVQTATQQRDGWTARHLDVTTEVPRKRPNRGTAGAAAGAKCDRRFERIGVQRIAEAPIPTAAQFREKGHQALVDALEKEAG 446          
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: F0YEQ3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEQ3_AURAN)

HSP 1 Score: 142 bits (357), Expect = 6.620e-33
Identity = 110/333 (33.03%), Postives = 147/333 (44.14%), Query Frame = 1
Query:    1 MLMDACGCDLPDEGRRADVSGRGLVSVVGEDMSFFVRLQAVDAGDNSLPFDSFLDLPRLDELRLPCNNIRDIDGRKILAQLQFGGGDGKSGTGYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLADLPVAMARFPALQKLSLERNQLE--SDAAFD-----VLSRLPGLRELNLAFNYFTGINLDPGIAEQA-------FPLLEALDLGFNFIGSERDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLIAESDRIRGDYANYPIEVITELPRIRQTRGXXXXXXXXXX-RPYGDTGVTMVDEGCLPPASAFRDAGNRSLF 954
            +L++ACG + PDEG RADVSG    SV   D+ +F RL  +D  DN LP   F  LPRL ELR   N +   D  +  +  Q             +L+ LDLSYN+L   A++ L  +                                        DA  D      LS L  LREL+LA N  TG      +AE         F  L AL+L +N I +E DV+ + L  +L+ L LYGNPL GP  ED+ G  V      +   R  + +  +EV TE+PR R  RG           R + +  +T V E  +P A+ FR  GNR+L 
Sbjct:   74 LLLEACGVEFPDEGHRADVSGYAASSVSETDLEYFPRLATLDCSDNCLPLAPFGKLPRLKELRFAANGLERFDWPQGSSAWQ-------------RLQVLDLSYNALGVQAVTNLAGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDAQDDCGNVCALSGLTRLRELSLAHNKLTGFPTLDAVAEATKVSETAIFVELVALNLAWNKIHTEGDVMGLTLLPKLEHLALYGNPLLGPAKEDASGGSVRNFAECAADARDGWTDRLLEVSTEVPRRRAPRGSMAAATNARGDRRFRNVSLTRVPEPPIPTAAEFRARGNRALL 393          
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: A0A7S0N1X0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1X0_9CHLO)

HSP 1 Score: 103 bits (258), Expect = 1.330e-20
Identity = 79/237 (33.33%), Postives = 113/237 (47.68%), Query Frame = 1
Query:    4 LMDACGCDLPDEGRRADVSGRGLVSVVGEDMSFFVRLQAVDAGDNSLP-FDSFLDLPRLDELRLPCNNIRDIDGRKILAQLQFGGGDGKSGTGYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLADLPVAM---ARFPALQKLSL--ERNQLESDAAFDVLSRLPGLRELNLAFNYFTGINLDPGIAEQAFPLLEALDLGFNFIGSERDVVVVVLFERLQRLILYGNPLA 696
            L+ ACG +LP+  +   + G+  V V  ED+  FV LQ +D GDN LP      +LP L  L++ CN+         L+ LQ   G       +  L  L+L YN L   AL  L  LP+L +LD++ N +   P        FPAL+ L L  +  ++     +  L  LP LR L +  N     N D  +    FP L  LDL  N +  E D+V  V    L++++L+G PLA
Sbjct:   85 LVGACGVELPEAVQTVSLMGKNYVDVEVEDLHHFVCLQDLDVGDNQLPGMHCLAELPVLRTLKMQCNS---------LSTLQIEPGS------FHTLETLELCYNCLGADALLQLATLPNLRELDVSFNCINRPPSEQFPSEAFPALETLHLGGQTPKMAPSVVYR-LGHLPRLRALRVPNNNIQSFNPDK-VRPDMFPALGLLDLADNRVEVEDDIVAFVQCPELEKVVLWGTPLA 304          
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: A0A7S2S8V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8V5_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.460e-16
Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 1
Query:  499 PGLRELNLAFNYFTGINLDPGIAEQAFPLLEALDLGFNFIGSERDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLIAESDRIRGDYANYPIEVITELPR 813
            P L+EL+L FNY T +          FP L  L+L FN+I SE D+V VV   +L+ L++YGNPL GPTGED  G  +E L      +R  Y+   ++++TE P+
Sbjct:    1 PQLQELHLGFNYLT-VFPRAATGVDRFPCLHTLNLAFNYIASEDDLVPVVHLHKLEMLVIYGNPLLGPTGEDPSGTSIEYLAQCLLDVRTGYSTRALDILTEKPK 104          
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: W6KNS6_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KNS6_9TRYP)

HSP 1 Score: 91.7 bits (226), Expect = 6.680e-16
Identity = 74/262 (28.24%), Postives = 115/262 (43.89%), Query Frame = 1
Query:    4 LMDACGCDLPDEGRRADVSGRGLVSVVGEDMSFFVRLQAVDAGDNSLPFDSFLDLPRLDELRLPCNNIRDIDGRKILAQLQFGGGDGKSGTGYG---------------------QLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLADLPVAMARFPALQKLSLERNQLESDA-------AFDVLSRLPGLRELNLAFN---YFTGINLDPGIAEQAFPLLEALDLGFN-FIGSERDVVVVVLFERLQRLILYGNPL 693
            +++A G D P+      +    L + V ED+SFF +L  +D  +NSL  +  + L  L+ L + CN I  + G   + Q Q        GT  G                      L  L+LSYN +  G LS+L H P L  LDL+ N +  LP  ++    +   +LE NQ  S          F  LS +P L E+NL  N   +   +++  G     FP +E + +  N F  +E  V +  L   L++++L  NP+
Sbjct:  168 ILNAAGTDNPEAVEAVTLQCSYLTNSVPEDLSFFTKLVFLDVSENSLNVEDLVALTSLETLHIACNKISSLAGINWVLQQQRQDSGAPDGTECGPSASATLGTSKSLSLHDVLLPNLTALNLSYNRIPAGHLSLLVHFPCLEKLDLSGNDIKVLPRDLSFLTGVTHFALENNQFRSSLDKGDKSDVFQSLSTMPSLVEVNLNHNQLFHVPPLSMHSGRG-LCFPSIEIIGVADNQFQLTEGLVELGHLHRTLRQIVLTNNPI 428          
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: A0A7S2Y223_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y223_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.320e-15
Identity = 39/104 (37.50%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  658 RLQRLILYGNPLAGPTGEDSLGLCVEKLIAESDRIRGDYANYPIEVITELPRIRQTRGXXXXXXXXXXRPYGDTGVTMVDEGCLPPASAFRDAGNRSLFRFERK 969
            ++ R+ILYGNP+AGP+GED  G CV+  +A +++ R  +   P+EV+ E PR + +            RPY D    +V+E  +P A+ F++AGN+ L+   RK
Sbjct:    7 QVTRIILYGNPIAGPSGEDPSGACVQGFLATAEQFRHGWIERPLEVVLEEPRQKVSE-------RVNRRPYRDVETVVVNEKPIPSAAQFKEAGNKRLYEGRRK 103          
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Match: A0A078A4A4_STYLE (Leucine rich repeat family protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A4A4_STYLE)

HSP 1 Score: 89.4 bits (220), Expect = 4.160e-15
Identity = 73/256 (28.52%), Postives = 125/256 (48.83%), Query Frame = 1
Query:    4 LMDACGCDLPDEGRRADVSGRGLVSVVGEDMSFFVRLQAVDAGDNSLPFDSFLDLPRLDELR------LPCNNIRDIDGRKILAQLQFGGGDGKSGTGYG--QLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLADLPVAMARFPALQKLSLERNQLESDAA-------FDVLSRLPGLRELNLAFNYFTGINLDP-GIAEQAFPLLEALDLGFNFIGSERDVVVVVLFERLQRLILYGNPL----AGPTGE 711
            ++ +C   LP E  +A++    +  +   D+SFF  L  +DA DN L  +S ++L +L  L+      L  N+I  +   +    +     D    T +G   L  + L+YN++   ++  L  LP L  LDL+ N L+ +P  ++    L++L+L  N   S  +       F  L+ +P +++LNL++N   GI+ +   I +  F  L  LDL +N I S+ D++    F+ L  L L GNP+     G TG+
Sbjct:  241 ILYSCRVKLPHEAIKANLQSLCINIINQNDLSFFNNLSYLDASDNQL--NSQIELIKLGMLKNLTHINLAYNHINSLQFLQECHLMLQNQKDVSVKTYFGLISLETIGLAYNNIPINSIHFLKFLPKLKVLDLSSNYLSQVPDDLSYLLNLEELNLSHNLFSSHTSIYNPNKFFMALASIPRIKKLNLSYNKLEGIHYEEMQIKKVNFHKLTELDLSYNIITSQEDLLYCQNFQNLILLTLAGNPIFETQEGKTGD 494          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1211.1646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8K0_ECTSI4.750e-22964.53Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A836C9W6_9STRA2.150e-6739.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XTX8_HETAK9.000e-6641.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4E570_9STRA4.780e-4434.93Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
F0YEQ3_AURAN6.620e-3333.03Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S0N1X0_9CHLO1.330e-2033.33Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S2S8V5_9STRA2.460e-1641.90Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W6KNS6_9TRYP6.680e-1628.24Uncharacterized protein n=1 Tax=Phytomonas sp. iso... [more]
A0A7S2Y223_9STRA2.320e-1537.50Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A078A4A4_STYLE4.160e-1528.52Leucine rich repeat family protein n=1 Tax=Stylony... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1211contigE-fasciculatus_F_contig1211:15394..17993 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score650.6
Seed ortholog evalue4.9e-184
Seed eggNOG ortholog2880.D7G8K0
KEGG koko:K08460
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04030
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-14_003290.1
Exons5
Model size1430
Cds size1233
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1211.1646.1prot_E-fasciculatus_F_contig1211.1646.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1211 15591..17993 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927721.3905213-UTR-E-fasciculatus_F_contig1211:15393..155901622927721.3905213-UTR-E-fasciculatus_F_contig1211:15393..15590Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1211 15394..15590 -
1695995665.3859591-UTR-E-fasciculatus_F_contig1211:15393..155901695995665.3859591-UTR-E-fasciculatus_F_contig1211:15393..15590Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1211 15394..15590 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927721.4584656-CDS-E-fasciculatus_F_contig1211:15590..157341622927721.4584656-CDS-E-fasciculatus_F_contig1211:15590..15734Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 15591..15734 -
1695995665.3958185-CDS-E-fasciculatus_F_contig1211:15590..157341695995665.3958185-CDS-E-fasciculatus_F_contig1211:15590..15734Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 15591..15734 -
1622927721.468997-CDS-E-fasciculatus_F_contig1211:16008..160181622927721.468997-CDS-E-fasciculatus_F_contig1211:16008..16018Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 16009..16018 -
1695995665.4037752-CDS-E-fasciculatus_F_contig1211:16008..160181695995665.4037752-CDS-E-fasciculatus_F_contig1211:16008..16018Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 16009..16018 -
1622927721.4832954-CDS-E-fasciculatus_F_contig1211:16573..168941622927721.4832954-CDS-E-fasciculatus_F_contig1211:16573..16894Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 16574..16894 -
1695995665.4118483-CDS-E-fasciculatus_F_contig1211:16573..168941695995665.4118483-CDS-E-fasciculatus_F_contig1211:16573..16894Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 16574..16894 -
1622927721.5005727-CDS-E-fasciculatus_F_contig1211:17087..173621622927721.5005727-CDS-E-fasciculatus_F_contig1211:17087..17362Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 17088..17362 -
1695995665.4197361-CDS-E-fasciculatus_F_contig1211:17087..173621695995665.4197361-CDS-E-fasciculatus_F_contig1211:17087..17362Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 17088..17362 -
1622927721.5145304-CDS-E-fasciculatus_F_contig1211:17510..179931622927721.5145304-CDS-E-fasciculatus_F_contig1211:17510..17993Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 17511..17993 -
1695995665.427621-CDS-E-fasciculatus_F_contig1211:17510..179931695995665.427621-CDS-E-fasciculatus_F_contig1211:17510..17993Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1211 17511..17993 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1211.1646.1

>prot_E-fasciculatus_F_contig1211.1646.1 ID=prot_E-fasciculatus_F_contig1211.1646.1|Name=mRNA_E-fasciculatus_F_contig1211.1646.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=411bp
MLMDACGCDLPDEGRRADVSGRGLVSVVGEDMSFFVRLQAVDAGDNSLPF
DSFLDLPRLDELRLPCNNIRDIDGRKILAQLQFGGGDGKSGTGYGQLRRL
DLSYNSLSGGALSVLTHLPSLTDLDLTCNGLADLPVAMARFPALQKLSLE
RNQLESDAAFDVLSRLPGLRELNLAFNYFTGINLDPGIAEQAFPLLEALD
LGFNFIGSERDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLIAE
SDRIRGDYANYPIEVITELPRIRQTRGGGGGGGGRRRRPYGDTGVTMVDE
GCLPPASAFRDAGNRSLFRFERKPSGDGSGDGDAPDDNIVEATLRLARES
KNRATLAASRVDEVLTSMGAGMDRMVLENRARENNNGAQAKPELSTIIRT
VNAVLDETEY*
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mRNA from alignment at E-fasciculatus_F_contig1211:15394..17993-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1211.1646.1 ID=mRNA_E-fasciculatus_F_contig1211.1646.1|Name=mRNA_E-fasciculatus_F_contig1211.1646.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2600bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1211:15394..17993- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTGATGGACGCATGCGGGTGCGACCTCCCTGACGAGGGCCGCAGGGC AGACGTGAGCGGCAGGGGGCTCGTGAGCGTGGTCGGGGAGGACATGTCCT TCTTCGTCCGCTTGCAGGCCGTTGACGCTGGAGACAACAGCCTTCCCTTT GACAGCTTCCTGGACCTGCCACGGCTGGACGAGCTTCGCCTCCCCTGCAA CAACATCCGCGACATCGACGGACGGAAGATCCTGGCGCAGCTGCAGTTCG GCGGCGGCGACGGCAAAAGCGGCACCGGCTACGGCCAGCTGCGACGTCTA GATCTCTCTTACAATAGTTTGTCGGGTGGTGCCCTGTCGGTGCTGACGCA CCTCCCGAGTCTAACCGACCTGGATCTCACGTGCAACGGCCTCGCCGACC TTCCCGTGGCCATGGCTCGCTTTCCGGCTCTCCAGAAGCTATCGCTGGAA CGAAATCAGCTCGAGAGCGACGCAGCGTTTGATGTAAGCTGAGCGCGGCT GTGGGCGACAACCTCGTTGCGTAACTACTTTTTCACGCAGTCCGTTTGTC GAGGTGTGGGCAATAGGCAGACCAGTGACGTCTTCCGTACTGTGCCAAAC CAATTCCGCCCTCGTCGCGTCCCGATCATAGGTGCTTTCTAGGCTCCCAG GCTTGCGAGAGCTCAATCTCGCCTTCAACTACTTCACGGGCATCAACCTC GACCCAGGGATAGCAGAACAAGCGTTCCCTCTGTTGGAGGCGCTTGACCT GGGGTTTAACTTTATCGGCAGCGAGAGGGACGTGGTCGTGGTAGTGCTTT TCGAACGGTTGCAGAGGCTGATTCTGTACGGGAACCCACTGGCAGGGCCG ACGGGGGAAGACTCGCTCGGTCTCTGCGTCGAAAAGCTTATTGCCGAGTC AGACAGGTATGTAGGCGTGGCCGTTCAGCGTCCTGCCGAGGATAGGTTGT GATTAAAGCGGCTATTGCCGTCGACGCCGTCGTTCGTTGCTGTTGCTGCT GCTGTTTGGTTATACACTCGTTCGATACCGACCCTCCTGTCTGGCGACCG CCCGTCTGTGTGTCGCGTCTGCCGCGTCCGTGCGTTACACAATTGACAGA ATCCGCGGAGACTACGCGAACTATCCTATAGAGGTTATCACAGAGCTTCC CAGAATAAGGCAGACGCGAGGCGGGGGGGGAGGGGGCGGGGGTCGGCGGC GGCGCCCGTACGGTGACACAGGTGTCACGATGGTCGACGAGGGCTGCTTG CCGCCGGCAAGCGCGTTCCGCGACGCCGGGAACAGGTCGCTCTTTAGATT CGAACGAAAGCCAAGCGGGGACGGCAGCGGTGATGGTGACGCCCCCGACG ACAACATCGTGGAGGCGACGCTGCGCTTAGCCAGGGAGAGCAAGAACCGG GCGACCTTGGCCGCCAGCAGGTCTGCGGCAACGGCGGCGGCCATAGGAGT GCAGGATTGTACGTTCTTGACCAGCGTGGAGCGGCAACAAGACGACGTTG GAACTGCTGCCAATGGCAACGCCACGGGCGAAAGAGAAAATGCAGCTGGC GAGGACGTTGGAAGGTTGCTAGGCCAAGAGGCAGGCGCCGGGGGTGGAAT GTCTACTCGCTTGTTGCGGGGACCGATCGATCCGATGGTTCGCGGAGACC CGGTAAAGCTGCGGATGGCATTGACGGCTCTGCGGTACACGCTGAAGCAC CCGGTAACATCTTCGTTGGATGTTCAATGGCAGAAACAGCAACAACTGCA ACAACAACAACAACAACAACAACAACAACAACAACAGCAGCAGCTCACGC GCGGCAAGGATTGTGGGGCAGGCCGAAAAACGGCCGCCGCTCGCGCGAGA CAGCTCCCCCGCCGTCCGTATCGGCTCCTCAAGTCATCGCACCAAGTGGG CTTCTGCGCCAGACTGTTGGACGATCCGACGAAGGACGGTCGTGGAGGCG GCGGGGTTGACGGCGGTCTAGGCAGGGTGGATGAGGTGAGCCGTGGTGTC GTTCTACGACGGGGTGCCATCAAGCTTTCGTCGGGTTCTCTGCCACGACG AGCATCATCATACCTCATACTGCCAAGCGGCCGCTACATCTCGCCTGCAA CTGATGTTTTCCGTTGATGTATTGGCGTGTTGTTACCTAGAACCAATTTG AAATCGCGAGGTATTCCTAGCTCAGTTGAGTATCCCCACGTCCCAGAACC AGCATGCTTACGAAATGTACACCCCCTCTGATCCCTCTGCCGCGGACGTG TGACATCAGGTTTTGACGTCCATGGGCGCGGGTATGGACAGGATGGTGCT CGAGAACCGAGCGAGGGAGAACAACAACGGTGCCCAGGCGAAGCCCGAAC TGTCGACGATCATCCGGACGGTTAACGCAGTTTTGGACGAGACCGAGTAT TGACGTGGGCGTTGATTACATGCCTTGCCGAGTGAGGGGAGGGAGGGCAT CGCCAACCAATAAATTGTCGAACACCGGCAGCCACGGATTGGTTGCGGAG GCTCTGACCTCTTGGTCCTGAAGTTTTGGATGGGAGGAATGTTGGGCGAG GGCACGTGTGATAGAGTCTCGTGGTATATGTTCGATTTTGTCTATTGGGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1211:15394..17993-

>mRNA_E-fasciculatus_F_contig1211.1646.1 ID=mRNA_E-fasciculatus_F_contig1211.1646.1|Name=mRNA_E-fasciculatus_F_contig1211.1646.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2466bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1211:15394..17993- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTGATGGACGCATGCGGGTGCGACCTCCCTGACGAGGGCCGCAGGGC
AGACGTGAGCGGCAGGGGGCTCGTGAGCGTGGTCGGGGAGGACATGTCCT
TCTTCGTCCGCTTGCAGGCCGTTGACGCTGGAGACAACAGCCTTCCCTTT
GACAGCTTCCTGGACCTGCCACGGCTGGACGAGCTTCGCCTCCCCTGCAA
CAACATCCGCGACATCGACGGACGGAAGATCCTGGCGCAGCTGCAGTTCG
GCGGCGGCGACGGCAAAAGCGGCACCGGCTACGGCCAGCTGCGACGTCTA
GATCTCTCTTACAATAGTTTGTCGGGTGGTGCCCTGTCGGTGCTGACGCA
CCTCCCGAGTCTAACCGACCTGGATCTCACGTGCAACGGCCTCGCCGACC
TTCCCGTGGCCATGGCTCGCTTTCCGGCTCTCCAGAAGCTATCGCTGGAA
CGAAATCAGCTCGAGAGCGACGCAGCGTTTGATATGCTGATGGACGCATG
CGGGTGCGACCTCCCTGACGAGGGCCGCAGGGCAGACGTGAGCGGCAGGG
GGCTCGTGAGCGTGGTCGGGGAGGACATGTCCTTCTTCGTCCGCTTGCAG
GCCGTTGACGCTGGAGACAACAGCCTTCCCTTTGACAGCTTCCTGGACCT
GCCACGGCTGGACGAGCTTCGCCTCCCCTGCAACAACATCCGCGACATCG
ACGGACGGAAGATCCTGGCGCAGCTGCAGTTCGGCGGCGGCGACGGCAAA
AGCGGCACCGGCTACGGCCAGCTGCGACGTCTAGATCTCTCTTACAATAG
TTTGTCGGGTGGTGCCCTGTCGGTGCTGACGCACCTCCCGAGTCTAACCG
ACCTGGATCTCACGTGCAACGGCCTCGCCGACCTTCCCGTGGCCATGGCT
CGCTTTCCGGCTCTCCAGAAGCTATCGCTGGAACGAAATCAGCTCGAGAG
CGACGCAGCGTTTGATGTGCTTTCTAGGCTCCCAGGCTTGCGAGAGCTCA
ATCTCGCCTTCAACTACTTCACGGGCATCAACCTCGACCCAGGGATAGCA
GAACAAGCGTTCCCTCTGTTGGAGGCGCTTGACCTGGGGTTTAACTTTAT
CGGCAGCGAGAGGGACGTGGTCGTGGTAGTGCTTTTCGAACGGTTGCAGA
GGCTGATTCTGTACGGGAACCCACTGGCAGGGCCGACGGGGGAAGACTCG
CTCGGTCTCTGCGTCGAAAAGCTTATTGCCGAGTCAGACAGGTGCTTTCT
AGGCTCCCAGGCTTGCGAGAGCTCAATCTCGCCTTCAACTACTTCACGGG
CATCAACCTCGACCCAGGGATAGCAGAACAAGCGTTCCCTCTGTTGGAGG
CGCTTGACCTGGGGTTTAACTTTATCGGCAGCGAGAGGGACGTGGTCGTG
GTAGTGCTTTTCGAACGGTTGCAGAGGCTGATTCTGTACGGGAACCCACT
GGCAGGGCCGACGGGGGAAGACTCGCTCGGTCTCTGCGTCGAAAAGCTTA
TTGCCGAGTCAGACAGAATCCGCGGAGACTACGCGAACTATCCTATAGAG
GTTATCACAGAGCTTCCCAGAATAAGGCAGACGCGAGGCGGGGGGGGAGG
GGGCGGGGGTCGGCGGCGGCGCCCGTACGGTGACACAGGTGTCACGATGG
TCGACGAGGGCTGCTTGCCGCCGGCAAGCGCGTTCCGCGACGCCGGGAAC
AGGTCGCTCTTTAGATTCGAACGAAAGCCAAGCGGGGACGGCAGCGGTGA
TGGTGACGCCCCCGACGACAACATCGTGGAGGCGACGCTGCGCTTAGCCA
GGGAGAGCAAGAACCGGGCGACCTTGGCCGCCAGCAGAATCCGCGGAGAC
TACGCGAACTATCCTATAGAGGTTATCACAGAGCTTCCCAGAATAAGGCA
GACGCGAGGCGGGGGGGGAGGGGGCGGGGGTCGGCGGCGGCGCCCGTACG
GTGACACAGGTGTCACGATGGTCGACGAGGGCTGCTTGCCGCCGGCAAGC
GCGTTCCGCGACGCCGGGAACAGGTCGCTCTTTAGATTCGAACGAAAGCC
AAGCGGGGACGGCAGCGGTGATGGTGACGCCCCCGACGACAACATCGTGG
AGGCGACGCTGCGCTTAGCCAGGGAGAGCAAGAACCGGGCGACCTTGGCC
GCCAGCAGGGTGGATGAGGGTGGATGAGGTTTTGACGTCCATGGGCGCGG
GTATGGACAGGATGGTGCTCGAGAACCGAGCGAGGGAGAACAACAACGGT
GCCCAGGCGAAGCCCGAACTGTCGACGATCATCCGGACGGTTAACGCAGT
TTTGGACGAGACCGAGTATTGAGTTTTGACGTCCATGGGCGCGGGTATGG
ACAGGATGGTGCTCGAGAACCGAGCGAGGGAGAACAACAACGGTGCCCAG
GCGAAGCCCGAACTGTCGACGATCATCCGGACGGTTAACGCAGTTTTGGA
CGAGACCGAGTATTGA
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