mRNA_E-fasciculatus_F_contig12034.1585.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12034.1585.1
Unique NamemRNA_E-fasciculatus_F_contig12034.1585.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: D8LER8_ECTSI (Peptidase_M24 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER8_ECTSI)

HSP 1 Score: 424 bits (1090), Expect = 7.530e-149
Identity = 206/214 (96.26%), Postives = 209/214 (97.66%), Query Frame = 1 
Query:    4 ENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            +NDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLK AGLLTGSVDDMMAANVGA+FMPHGLGHLIGLDTHDVGGYPEGGRARD RPGHSSLRCGRDLADGMAITVEPGIYFIDHLL+KALADPEV PFLV  ELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG
Sbjct:   63 DNDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDSRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLNKALADPEVAPFLVTSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 276
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BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: A0A6H5KDB9_9PHAE (AMP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB9_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 1.160e-144
Identity = 208/216 (96.30%), Postives = 209/216 (96.76%), Query Frame = 1 
Query:    4 ENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPE--VVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            ENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLK AGLLTGSVDDMMAANVGA+FMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKAL DPE  V PFLV  ELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG
Sbjct:  315 ENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKDAGLLTGSVDDMMAANVGAVFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALKDPEASVAPFLVKSELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 530
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BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: A0A835YHY5_9STRA (Peptidase M24, structural domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHY5_9STRA)

HSP 1 Score: 330 bits (847), Expect = 6.160e-112
Identity = 160/213 (75.12%), Postives = 179/213 (84.04%), Query Frame = 1 
Query:    7 NDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            NDMLLLDMG EYHCYASDITCSFPA+GKFT +QK++FEAV DM  AVM AMKPGV W  +H+LSYRV CERLKAAG+LTG VD MMAANVGA+FMPHGLGHL+GLDTHD GGYP G   RD RPG+ SLRCGR L  GM ITVEPGIYFI+HLLD+ALADP +  FLV   + R+RG GGVRLEDDV+VT +G+RNLTNC RTVEDVE VM+G
Sbjct:   61 NDMLLLDMGAEYHCYASDITCSFPASGKFTPEQKVVFEAVADMQVAVMAAMKPGVPWKDMHDLSYRVGCERLKAAGVLTGDVDAMMAANVGAVFMPHGLGHLMGLDTHDCGGYPPGVE-RDARPGYKSLRCGRSLEAGMVITVEPGIYFINHLLDQALADPALSCFLVADAVERYRGTGGVRLEDDVLVTDNGIRNLTNCPRTVEDVEGVMSG 272
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BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: A0A482RJ57_9ARCH (Xaa-Pro dipeptidase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RJ57_9ARCH)

HSP 1 Score: 274 bits (700), Expect = 8.660e-90
Identity = 137/215 (63.72%), Postives = 157/215 (73.02%), Query Frame = 1 
Query:    1 RENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            +E+ M L DMG EY CY SDIT SFPA+GKFTADQK I+ AV     AVMD MKPGV W  +H+L+YRV   +L   GLL G V+DMMAAN+GA+FMPHGLGH +G+DTHDVGGYPEG   RD R G+ SLR  R L  GM ITVEPG YFIDHLL+ ALAD     F  L  LARFR FGGVR+EDDV+VT  G+ N T+  RTVED+EAV AG
Sbjct:   49 KEDAMCLFDMGAEYKCYGSDITTSFPASGKFTADQKFIYNAVLAAQHAVMDTMKPGVQWLDMHDLTYRVLLTKLTEGGLLMGEVEDMMAANLGAVFMPHGLGHFLGIDTHDVGGYPEGSE-RDARDGYRSLRANRALVAGMYITVEPGCYFIDHLLNAALADATKARFFNLDVLARFRTFGGVRIEDDVLVTEAGIDNFTHAPRTVEDIEAVWAG 262
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BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: S9XM68_CAMFR (Xaa-Pro dipeptidase isoform 3 n=1 Tax=Camelus ferus TaxID=419612 RepID=S9XM68_CAMFR)

HSP 1 Score: 270 bits (690), Expect = 4.970e-88
Identity = 136/215 (63.26%), Postives = 158/215 (73.49%), Query Frame = 1 
Query:    1 RENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            ++ DM L DMGGEY+C+ASDITCSFPANGKFT DQK I+EAV     AVM AMKPGV WP +H L+ R+  E L   G+LTGSVD M+ A++GA+FMPHGLGH +G+D HDVGGYPEG    D  PG  SLR  R L  GM +TVEPGIYFIDHLLD+ALADP    F     L RFRGFGGVR+E+DVVVT  G+  LT   RTVE++EA MAG
Sbjct:   66 QDGDMCLFDMGGEYYCFASDITCSFPANGKFTEDQKAIYEAVLRSCRAVMRAMKPGVWWPDMHRLADRIHLEELTRIGVLTGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERID-EPGLRSLRTARQLEPGMVLTVEPGIYFIDHLLDEALADPARACFFNREVLQRFRGFGGVRIEEDVVVTDSGMELLTCVPRTVEEIEACMAG 279
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BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: H3A0R6_LATCH (Peptidase D n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3A0R6_LATCH)

HSP 1 Score: 267 bits (683), Expect = 2.150e-87
Identity = 132/212 (62.26%), Postives = 157/212 (74.06%), Query Frame = 1 
Query:   10 DMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            D+ L DMGGEY+CYASDITC+FPANGKFT DQK I+EAV   + AVM A+KPG  WP +H L+ R+  E L   G+L GSVDDM+  ++GAIFMPHGLGHL+G+D HDVGGYPEG    D  PG  SLR  R L + M +TVEPGIYFIDHLLDKALA+P    F+    L RFRGFGGVR+EDD+ VT +G+  LT   RTVE++EA MAG
Sbjct:   48 DLCLFDMGGEYYCYASDITCTFPANGKFTPDQKAIYEAVLKSSRAVMSAIKPGAPWPDMHRLADRIHLEELTKIGILKGSVDDMLKVHLGAIFMPHGLGHLLGVDVHDVGGYPEGVERID-LPGLKSLRTARVLQERMVLTVEPGIYFIDHLLDKALAEPTQSCFINSEVLQRFRGFGGVRIEDDIAVTTNGIELLTCVPRTVEEIEAFMAG 258
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BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: P12955-3 (Isoform 3 of Xaa-Pro dipeptidase n=45 Tax=Boreoeutheria TaxID=1437010 RepID=P12955-3)

HSP 1 Score: 273 bits (697), Expect = 3.020e-87
Identity = 136/215 (63.26%), Postives = 160/215 (74.42%), Query Frame = 1 
Query:    1 RENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            +  DM L DMGGEY+C+ASDITCSFPANGKFTADQK ++EAV   + AVM AMKPGV WP +H L+ R+  E L   G+L+GSVD M+ A++GA+FMPHGLGH +G+D HDVGGYPEG    D  PG  SLR  R L  GM +TVEPGIYFIDHLLD+ALADP    FL    L RFRGFGGVR+E+DVVVT  G+  LT   RTVE++EA MAG
Sbjct:  204 QNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERID-EPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMAG 417
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BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: P12955-2 (Isoform 2 of Xaa-Pro dipeptidase n=90 Tax=Boreoeutheria TaxID=1437010 RepID=P12955-2)

HSP 1 Score: 273 bits (697), Expect = 5.820e-87
Identity = 136/215 (63.26%), Postives = 160/215 (74.42%), Query Frame = 1 
Query:    1 RENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            +  DM L DMGGEY+C+ASDITCSFPANGKFTADQK ++EAV   + AVM AMKPGV WP +H L+ R+  E L   G+L+GSVD M+ A++GA+FMPHGLGH +G+D HDVGGYPEG    D  PG  SLR  R L  GM +TVEPGIYFIDHLLD+ALADP    FL    L RFRGFGGVR+E+DVVVT  G+  LT   RTVE++EA MAG
Sbjct:  227 QNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERID-EPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMAG 440
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BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: A0A5N4DS23_CAMDR (Xaa-Pro dipeptidase n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4DS23_CAMDR)

HSP 1 Score: 265 bits (677), Expect = 6.480e-87
Identity = 134/209 (64.11%), Postives = 154/209 (73.68%), Query Frame = 1 
Query:   19 LLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            L DMGGEY+C+ASDITCSFPANGKFT DQK I+EAV     AVM AMKPGV WP +H L+ R+  E L   G+LTGSVD M+ A++GA+FMPHGLGH +G+D HDVGGYPEG    D  PG  SLR  R L  GM +TVEPGIYFIDHLLD+ALADP    F     L RFRGFGGVR+E+DVVVT  G+  LT   RTVE++EA MAG
Sbjct:   12 LFDMGGEYYCFASDITCSFPANGKFTEDQKAIYEAVLQSCRAVMRAMKPGVWWPDMHRLADRIHLEELTRIGVLTGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERID-EPGLRSLRTTRQLEPGMVLTVEPGIYFIDHLLDEALADPARACFFNREVLQRFRGFGGVRIEEDVVVTDSGMELLTCVPRTVEEIEACMAG 219
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Match: UPI0004D09BD8 (xaa-Pro dipeptidase n=1 Tax=Galeopterus variegatus TaxID=482537 RepID=UPI0004D09BD8)

HSP 1 Score: 266 bits (681), Expect = 7.080e-87
Identity = 135/215 (62.79%), Postives = 158/215 (73.49%), Query Frame = 1 
Query:    1 RENDMLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMKPGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHLIGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDHLLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCARTVEDVEAVMAG 645
            ++ DM L DMGGEY+ YASDITCSFPANGKFTADQK I+EAV     AVM AMKPGV WP +H L+ R+  E L   G+L+GSVD M+ A +GA+FMPHGLGH +G+D HDVGGYPEG +  D  PG  SLR  R L  GM +TVEPGIYFIDH+LD+ALADP    F     L RFRGFGGVR+E+DVVVT  G+  LT   RTVE++EA MAG
Sbjct:   54 QDGDMCLFDMGGEYYRYASDITCSFPANGKFTADQKAIYEAVLRSCRAVMSAMKPGVWWPDMHRLADRIHLEELARIGILSGSVDAMVQARMGAVFMPHGLGHFLGIDVHDVGGYPEGIQRID-EPGLRSLRTARHLEPGMVLTVEPGIYFIDHVLDEALADPTRACFFNREVLQRFRGFGGVRIEEDVVVTDSGMELLTCVPRTVEEIEACMAG 267
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12034.1585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LER8_ECTSI7.530e-14996.26Peptidase_M24 domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KDB9_9PHAE1.160e-14496.30AMP_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YHY5_9STRA6.160e-11275.12Peptidase M24, structural domain-containing protei... [more]
A0A482RJ57_9ARCH8.660e-9063.72Xaa-Pro dipeptidase n=1 Tax=archaeon TaxID=1906665... [more]
S9XM68_CAMFR4.970e-8863.26Xaa-Pro dipeptidase isoform 3 n=1 Tax=Camelus feru... [more]
H3A0R6_LATCH2.150e-8762.26Peptidase D n=2 Tax=Latimeria chalumnae TaxID=7897... [more]
P12955-33.020e-8763.26Isoform 3 of Xaa-Pro dipeptidase n=45 Tax=Boreoeut... [more]
P12955-25.820e-8763.26Isoform 2 of Xaa-Pro dipeptidase n=90 Tax=Boreoeut... [more]
A0A5N4DS23_CAMDR6.480e-8764.11Xaa-Pro dipeptidase n=1 Tax=Camelus dromedarius Ta... [more]
UPI0004D09BD87.080e-8762.79xaa-Pro dipeptidase n=1 Tax=Galeopterus variegatus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12034contigE-fasciculatus_F_contig12034:1348..3487 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score421.0
Seed ortholog evalue3.3e-115
Seed eggNOG ortholog2880.D8LER8
KEGG koko:K14213
EggNOG free text desc.manganese ion binding
EggNOG OGsCOG0006@1,KOG2737@2759
EC3.4.13.9
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase M24, structural domain
Ec32 orthologEc-26_000890.1
Exons3
Model size645
Cds size633
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12034.1585.1prot_E-fasciculatus_F_contig12034.1585.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12034 1348..3475 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927712.089327-CDS-E-fasciculatus_F_contig12034:1347..15001622927712.089327-CDS-E-fasciculatus_F_contig12034:1347..1500Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12034 1348..1500 -
1695995661.877491-CDS-E-fasciculatus_F_contig12034:1347..15001695995661.877491-CDS-E-fasciculatus_F_contig12034:1347..1500Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12034 1348..1500 -
1622927712.103489-CDS-E-fasciculatus_F_contig12034:2320..26461622927712.103489-CDS-E-fasciculatus_F_contig12034:2320..2646Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12034 2321..2646 -
1695995661.8926094-CDS-E-fasciculatus_F_contig12034:2320..26461695995661.8926094-CDS-E-fasciculatus_F_contig12034:2320..2646Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12034 2321..2646 -
1622927712.1150093-CDS-E-fasciculatus_F_contig12034:3321..34751622927712.1150093-CDS-E-fasciculatus_F_contig12034:3321..3475Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12034 3322..3475 -
1695995661.9037626-CDS-E-fasciculatus_F_contig12034:3321..34751695995661.9037626-CDS-E-fasciculatus_F_contig12034:3321..3475Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12034 3322..3475 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927712.1262283-UTR-E-fasciculatus_F_contig12034:3475..34871622927712.1262283-UTR-E-fasciculatus_F_contig12034:3475..3487Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12034 3476..3487 -
1695995661.9129744-UTR-E-fasciculatus_F_contig12034:3475..34871695995661.9129744-UTR-E-fasciculatus_F_contig12034:3475..3487Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12034 3476..3487 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12034.1585.1

>prot_E-fasciculatus_F_contig12034.1585.1 ID=prot_E-fasciculatus_F_contig12034.1585.1|Name=mRNA_E-fasciculatus_F_contig12034.1585.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=211bp
MLLLDMGGEYHCYASDITCSFPANGKFTADQKMIFEAVRDMAFAVMDAMK
PGVSWPSLHELSYRVACERLKAAGLLTGSVDDMMAANVGAIFMPHGLGHL
IGLDTHDVGGYPEGGRARDPRPGHSSLRCGRDLADGMAITVEPGIYFIDH
LLDKALADPEVVPFLVLGELARFRGFGGVRLEDDVVVTADGVRNLTNCAR
TVEDVEAVMAG
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mRNA from alignment at E-fasciculatus_F_contig12034:1348..3487-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12034.1585.1 ID=mRNA_E-fasciculatus_F_contig12034.1585.1|Name=mRNA_E-fasciculatus_F_contig12034.1585.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2140bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12034:1348..3487- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGAGAAAACGACATGCTTCTCCTAGACATGGGCGGCGAGTACCACTGCTA
CGCCAGCGACATCACGTGCTCGTTCCCCGCTAACGGGAAGTTCACGGCCG
ACCAGAAGATGATCTTCGAGGCCGTTCGAGACATGGCCTTCGCGGTTATG
GACGCAATGAAGCCCGGTGAGACTTCGGTTCGGAGGAGATGTTGCTGTGG
GGGGTGTCCTTTTATTTCTTTTCATGCCTTGGTCGTTAGACCATTGACCA
CGCATCCTCGATAGGACGAAGCATTGTTCCCACAGAACCGATCACCGATT
GCCAATCGTTCCTTCCTACTTTGCCAAAGGTGGCGAGGGGGGGGGGTTAC
TCACCTGTCGCTCTTGTGTTGCGTGTTGACGCCTCGCCTGGTAATTCATG
CATACCTTTTCGTGACGGAGACCGGGCGACAGAAACGTTCACTACGGCAT
CCACCCATATGTGCCGACGCGACTAGATAGTTTGGCCTGAAACGTGAGGA
TTTTTTTCCTGCATGTGTTCTCACCCATGGTTTCCGTACGGTGGAGATGT
CTGTTGCGTACCTGGCCGTCCGCTTCTTGCCCCACCCACCCTGTTCGCGA
CACACACGCCTTCCACAAAGTCCCGCTTGTCGTTGAGTCACCACCGAAAA
CGCCTCCCTGCTACTATACCCCTTTCTGTCTTGCCTACAATATACTCTTT
AATTATTATACGGCTACGCGCCGAAATTACTACCCCCCGCCCCCCCCCAG
GTGTCCTCTCGAGGACGCGTGGTCAATGGTCTAAGGACTAGGGCATGCAA
AACATAAACGTACGCCCCACCCCCCCCCCCACCCCCCCCAGGCGTGTCGT
GGCCCTCGCTGCACGAGCTCTCCTACCGAGTCGCTTGCGAGCGGCTCAAG
GCCGCCGGCCTGCTCACCGGCTCCGTGGACGACATGATGGCGGCGAACGT
CGGGGCCATCTTCATGCCCCACGGCCTGGGCCACCTGATCGGCCTCGACA
CGCACGACGTGGGGGGGTACCCCGAGGGTGGGCGGGCGCGGGACCCCCGG
CCGGGGCACTCGAGCCTCCGCTGCGGGAGGGACCTCGCCGACGGGATGGC
GATCACGGTGGAGCCGGGGATTTACTTCATCGACCACCTGCTGGACAAGG
CCCTCGCGGACCCCGAGGTAAGCGTGTGCTGAGTTCGTTGAGCGCCCGCT
TGGGTGTATTTGTGAAAGTATACATGCGTTGTGGGAGAATCCTGTTTTTT
TCTGGGCCCGTTTTGTTTCCCGTTTCTTTGACGTCTAGTCTAGAAAGGTG
TACCCTTTTCTGGGTGGTTGGCGTGTGCCCACGGGAGGCGTCCGATTCAG
TTGGACCAGTACGGATATTAGAAGGTACCGAGAGGAGGCCGGACCGGTTT
TAATGTGGTGAAGATAATAACAACAACAACCAACAACAACAACAACAACA
ACAACAACAAACCAAATACAATCACAGACAGAGAGACTACCCGTTTGAGA
TACAACACAGTCGAAAGGGGTGTGTGTTGAGTATTTTCAGTGAGTGGGAC
TGAGCTAACCGGCTGACCAATGAAAAGACGCCAGTGCCGGCGGGTAACAA
TCGAGGTCCCTGGTACTAGGGGGGCAAACATTCGACATCCCCGTTGGTGT
CCGTGTGACAGGGGTGAAGATGCACCGTTGTGGTCGTACGTCCATACTCG
AGCATTGCCTGGTTGTTGTGGTGGGTTAGCCGACTGGCAAGAGTCTCAGG
CCAACGGCTTGAACACGGACCATGACCTAAGAGATACGGCTGTCAGCTTC
ACTGCGGTCGGGTAGTTCTTGTTGCCGCTTTTTTTCTATCAAGCACAGCA
TTGCCCCCTTGATGCCAATGGCGTTCGTTTTCGGGCGGCACAATTGCTGC
ATTTCTCGATGGACAGCTTCCGGAATAAATTAAGATCTCCCGCTACAAAT
ACCCTGAATCACCTCTCCTGTACCCTGTTCCAATAAGGTGGTGCCGTTCC
TAGTGCTCGGCGAGCTCGCGCGATTCCGCGGCTTCGGGGGGGTGAGGTTA
GAGGACGACGTGGTCGTGACGGCGGACGGTGTCAGGAATCTCACCAATTG
CGCTCGGACCGTCGAAGACGTGGAGGCTGTCATGGCCGGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12034:1348..3487-

>mRNA_E-fasciculatus_F_contig12034.1585.1 ID=mRNA_E-fasciculatus_F_contig12034.1585.1|Name=mRNA_E-fasciculatus_F_contig12034.1585.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1266bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12034:1348..3487- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTTCTCCTAGACATGGGCGGCGAGTACCACTGCTACGCCAGCGACAT
CACGTGCTCGTTCCCCGCTAACGGGAAGTTCACGGCCGACCAGAAGATGA
TCTTCGAGGCCGTTCGAGACATGGCCTTCGCGGTTATGGACGCAATGAAG
CCCGATGCTTCTCCTAGACATGGGCGGCGAGTACCACTGCTACGCCAGCG
ACATCACGTGCTCGTTCCCCGCTAACGGGAAGTTCACGGCCGACCAGAAG
ATGATCTTCGAGGCCGTTCGAGACATGGCCTTCGCGGTTATGGACGCAAT
GAAGCCCGGCGTGTCGTGGCCCTCGCTGCACGAGCTCTCCTACCGAGTCG
CTTGCGAGCGGCTCAAGGCCGCCGGCCTGCTCACCGGCTCCGTGGACGAC
ATGATGGCGGCGAACGTCGGGGCCATCTTCATGCCCCACGGCCTGGGCCA
CCTGATCGGCCTCGACACGCACGACGTGGGGGGGTACCCCGAGGGTGGGC
GGGCGCGGGACCCCCGGCCGGGGCACTCGAGCCTCCGCTGCGGGAGGGAC
CTCGCCGACGGGATGGCGATCACGGTGGAGCCGGGGATTTACTTCATCGA
CCACCTGCTGGACAAGGCCCTCGCGGACCCCGAGGCGTGTCGTGGCCCTC
GCTGCACGAGCTCTCCTACCGAGTCGCTTGCGAGCGGCTCAAGGCCGCCG
GCCTGCTCACCGGCTCCGTGGACGACATGATGGCGGCGAACGTCGGGGCC
ATCTTCATGCCCCACGGCCTGGGCCACCTGATCGGCCTCGACACGCACGA
CGTGGGGGGGTACCCCGAGGGTGGGCGGGCGCGGGACCCCCGGCCGGGGC
ACTCGAGCCTCCGCTGCGGGAGGGACCTCGCCGACGGGATGGCGATCACG
GTGGAGCCGGGGATTTACTTCATCGACCACCTGCTGGACAAGGCCCTCGC
GGACCCCGAGGTGGTGCCGTTCCTAGTGCTCGGCGAGCTCGCGCGATTCC
GCGGCTTCGGGGGGGTGAGGTTAGAGGACGACGTGGTCGTGACGGCGGAC
GGTGTCAGGAATCTCACCAATTGCGCTCGGACCGTCGAAGACGTGGAGGC
TGTCATGGCCGGCGTGGTGCCGTTCCTAGTGCTCGGCGAGCTCGCGCGAT
TCCGCGGCTTCGGGGGGGTGAGGTTAGAGGACGACGTGGTCGTGACGGCG
GACGGTGTCAGGAATCTCACCAATTGCGCTCGGACCGTCGAAGACGTGGA
GGCTGTCATGGCCGGC
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