mRNA_E-fasciculatus_F_contig11967.1534.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: A0A6H5JKU1_9PHAE (ERD protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKU1_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 8.690e-155 Identity = 233/247 (94.33%), Postives = 244/247 (98.79%), Query Frame = 1
Query: 1 LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLG+LYVFYVVPVTLLYLLLSEDSVTSYADWVA+LYD++ IFAA VQLLQP+ALLVLMNTLPPLIRLLGMAEGFPAESRNQQA LSRYFYFQI+NVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISL+QEYLLR+IWPRKTPRDRATVV+G+RPYFDAGWFNYPKYIAQDLLVVV+
Sbjct: 545 LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGVLYVFYVVPVTLLYLLLSEDSVTSYADWVAELYDNNTIFAALVQLLQPVALLVLMNTLPPLIRLLGMAEGFPAESRNQQAVLSRYFYFQIVNVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLMQEYLLRIIWPRKTPRDRATVVMGIRPYFDAGWFNYPKYIAQDLLVVVI 791
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: A0A835Z3W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W6_9STRA) HSP 1 Score: 271 bits (692), Expect = 2.280e-82 Identity = 138/246 (56.10%), Postives = 178/246 (72.36%), Query Frame = 1
Query: 4 HGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
H GR+ A E+PE RD+YW N + + R RRR+LV+ FL +LYVF+VVPVT LYL+ S +++++++ + D + +QP+ LL LMN LPPLIR LG+AEG AES NQ+ LSRYFYFQ+INVFLVTT+A ++ DT+S IV+ P+K TLLGE+LPK+ GFFCEY+++KM +GLWIEL+R SLLQ L +WP T RDR VV G+R Y D GWFNYPKY+AQDLLVVVV
Sbjct: 387 HTNKVGRLRAYEAPEPRDVYWQNAHIRRATRLRRRVLVDAFLAVLYVFWVVPVTGLYLVFSTEALSAHSALLRDSCARDGWLCTALDSVQPVMLLALMNALPPLIRALGVAEGSAAESWNQKVALSRYFYFQVINVFLVTTIAGTVFDTLSLIVDSPSKALTLLGESLPKMCGFFCEYVLIKMLSGLWIELSRLFSLLQHCALVCVWPMATRRDRRAVVAGMRRYDDPGWFNYPKYLAQDLLVVVV 632
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: F0Y5Y8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5Y8_AURAN) HSP 1 Score: 214 bits (546), Expect = 3.400e-60 Identity = 111/247 (44.94%), Postives = 166/247 (67.21%), Query Frame = 1
Query: 1 LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
H A PG M A +PE RD++W N ++ QR RR++ + + LL +FY++PVTL+ L+ SE ++ ++ + +L DS+ F A V+++QP+AL+ LM LPP LG EG + S N LSRY+ FQI NV LVTT+A S++ + +I+++P T +LLGE+LP+V FF YI +K+F+GL IEL R+++ +Q+ L R ++P TPRD+ VLG+R + + GWF+Y KY AQDLLVVV+
Sbjct: 764 FHAATPGGMVASMAPEPRDVFWKNAELSGKQRTTRRVVADCLVVLLLIFYIIPVTLISLVFSEQALKAHWPALKELASDSLAFDACVKMVQPMALIALMLLLPPAFLGLGFWEGTLSWSENTLTQLSRYYSFQITNVLLVTTIAGSLVKCLQKIIDDPQATLSLLGESLPQVCAFFSCYIFIKVFSGLCIELCRAVAAVQQALKRCLYPSSTPRDQRAEVLGLRDFENPGWFSYGKYGAQDLLVVVL 1010
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: A0A7S3ZXG7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXG7_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.140e-55 Identity = 111/247 (44.94%), Postives = 157/247 (63.56%), Query Frame = 1
Query: 1 LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
H APG + A +PE RD+ W N N R R + + + LL VFYVVPVTL+ + LSE ++ + +L S I AFV+ +QP+AL+ +M LPPL LG+ +G + + N +SRY+ FQIINV LVTT++ S++++I EI++EP TF+LLG +LP+V FFC Y+ +K FAGL +EL R ++ Q+ L R+I+P T +DR LG+R GWF++ KY AQDLLVVVV
Sbjct: 416 FHAEAPGGLVATPAPEPRDVIWRNIGFDTNTRATRGAIADCLVVLLLVFYVVPVTLVAMALSETALCDRYSSINNLVKSSFIADAFVKTIQPMALVGIMLLLPPLFLGLGVWQGCHSWTENTLLQMSRYYSFQIINVLLVTTISGSVVNSIEEILQEPASTFSLLGGSLPRVCAFFCCYVFMKAFAGLPLELCRGVAAAQQTLKRLIYPSATQQDRKHAFLGLRDIAGPGWFSFGKYGAQDLLVVVV 662
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: A0A7S3NIB5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIB5_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.250e-54 Identity = 112/247 (45.34%), Postives = 158/247 (63.97%), Query Frame = 1
Query: 1 LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
H A PG M A +PE RDI+W N R++Q R RR++ + + LL +FYVVPVTL+ L+LSE ++ + +A ++S++ A +++LQP L++LM LPPL LG EG + S N A LSRY+ FQI NV LVTTVA S++ + I+E P T TLL ++LP+V FF YI +K GL +EL R ++ Q + R I+P T RDRA V+LG+R + G+F+Y K+ AQDLLVV +
Sbjct: 480 FHAATPGGMIAAIAPEPRDIFWPNLRLSQPTRATRRVIANILVVLLLIFYVVPVTLISLVLSEQAILARWPSMAKAANNSILIAIGLKMLQPAGLILLMLLLPPLFLGLGFWEGQLSWSSNTLAQLSRYYSFQITNVLLVTTVAGSLVKCLQRIIEHPKDTLTLLAQSLPQVCAFFSCYIFIKALGGLPLELCRGVAAGQHIVKRCIYPAYTARDRAAVILGLRDINNPGFFSYGKFAAQDLLVVAL 726
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: A0A7S1B8V0_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8V0_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.940e-53 Identity = 101/247 (40.89%), Postives = 157/247 (63.56%), Query Frame = 1
Query: 1 LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
+H + PG M + +PE RDI W N V++ + RR L ++F+ +L FY+VPV L+ ++LSE ++ +++ + L S FA+ + ++QP++L+ + LPPL + AEG + S Q SRYF FQ+INVFLVT +A SI DT++ I+ P LLG +LPK+A FF Y+ +K F GL +EL R +SLLQ + ++ PR T R++ +V++G+R D GWF + K +AQD+LV+V+
Sbjct: 655 MHSSKPGSMRVQTAPEPRDILWDNIYVSKGAKRTRRYLADIFVHVLIFFYIVPVALVSMVLSEQALVAFSPRLEQLDQASAFFASSIAMVQPLSLVAIQQILPPLFMQVYKAEGILSFSEVQMKVFSRYFLFQVINVFLVTAIAGSIFDTMAIIISRPEIALELLGASLPKMASFFITYVTMKTFLGLGVELVRIMSLLQGTVRSLLCPRATLREKRSVMVGMRAIDDPGWFPFHKILAQDMLVIVI 901
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: A0A1E7ERH2_9STRA (DUF221-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERH2_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.930e-53 Identity = 100/247 (40.49%), Postives = 152/247 (61.54%), Query Frame = 1
Query: 1 LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
+H + PG M +PE RD+ W N V++ R IL E + L+ FY++PV L+ LL+SE ++ S + +A L + +F++ + L+QP+ ++++ LPPL +G EG S Q SRYF FQ++NVFLVTT+A SI DTI+ IVE+P + +LG +LP+++ FF ++ +K F GL +EL R++SLLQ + + P T R VV G+R D GWF + K +AQD+LVVV+
Sbjct: 217 MHSSKPGAMQVSSAPEPRDVLWSNVYVSKGATRTRSILGEFLVILIISFYIIPVALVSLLVSEQALVSSSPRLAQLDQATALFSSVIALVQPLCIMLMQQILPPLFMAIGRLEGLVCFSDIQMRAFSRYFLFQVLNVFLVTTIAGSIFDTIATIVEKPEEALLMLGNSLPRMSSFFITFVTIKTFFGLGLELVRTMSLLQATIRVFVIPNATLRTARRVVCGLRAIDDPGWFPFHKILAQDMLVVVI 463
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: A0A7S1ZBN9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBN9_TRICV) HSP 1 Score: 191 bits (485), Expect = 3.360e-53 Identity = 102/247 (41.30%), Postives = 154/247 (62.35%), Query Frame = 1
Query: 1 LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
+H + PG M +PE RDI W N +++ + R+ + E + L+ FY+VPV L+ LL+SE ++ S + +A L S F+ + ++QPI L+ + LPPL + AEG + S Q SRYF FQ++NVFLVT++ SI DTI+ I+E P TF +LG ALP+++ FF ++I+K F GL +EL R +SL+Q L +++P T R + +V LG+R D GWF + K +AQD+LVVV+
Sbjct: 110 MHSSRPGSMQVTTAPEPRDILWNNVYLSKGAKRTRQYIGETLIHLIITFYIVPVALVSLLVSESALISSSPRLAQLDQASPFFSTGIAMVQPICLVSIQQLLPPLFIQITKAEGQLSFSEVQMRAFSRYFLFQVLNVFLVTSITGSIFDTIAIIIENPETTFEMLGNALPRMSSFFTTFVIMKSFLGLGLELVRLVSLVQNMLRYILFPNSTLRAQRSVRLGMRAIDDPGWFPFHKILAQDMLVVVI 356
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: A0A7S2PQK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQK9_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.440e-52 Identity = 92/242 (38.02%), Postives = 149/242 (61.57%), Query Frame = 1
Query: 16 PGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
PG M +PE RDI W N ++ R R +++++F L FY+VPV L+ LL+SE ++ S + + L S +F+A + +QP+ L++L LPPL + EG + S Q SRYF +Q++NVFLVT++A S+ DT++ I+ P F +LG +LP+++ FF ++ +K F GL +E++R +S+LQ +L +++P T R + + + +R D GWFN K +AQD+LVVV+
Sbjct: 1 PGSMEVTTAPEPRDILWENVYFSKGARRARTLILQIFCLFLIAFYIVPVALVSLLVSESALVSISPRLNQLDKASSLFSAAIATVQPVCLVLLQQLLPPLFIRISRLEGTLSFSEAQMKAFSRYFMWQVLNVFLVTSIAGSVFDTLAIIIATPESAFEMLGNSLPRMSSFFVSFVTIKTFTGLGVEISRIVSILQNAILIILFPYSTLRAKRSTRMAMRAIDDPGWFNQHKILAQDMLVVVI 242
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Match: A0A7S4K333_9STRA (Hypothetical protein (Fragment) n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K333_9STRA) HSP 1 Score: 192 bits (488), Expect = 2.300e-52 Identity = 102/247 (41.30%), Postives = 154/247 (62.35%), Query Frame = 1
Query: 1 LHGAAPGRMAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYLLLSEDSVTSYADWVADLYDDSMIFAAFVQLLQPIALLVLMNTLPPLIRLLGMAEGFPAESRNQQATLSRYFYFQIINVFLVTTVANSILDTISEIVEEPTKTFTLLGEALPKVAGFFCEYIILKMFAGLWIELTRSISLLQEYLLRVIWPRKTPRDRATVVLGVRPYFDAGWFNYPKYIAQDLLVVVV 741
+H + PG M +PE RDI W N +++ + R I+ E + L+ FYVVPV L+ LL+SE ++ S + +A L S F+ + ++QPI L+ + LPPL + AEG + S Q SRYF FQ++NVFLVT++A SI DT++ I+E P F +LG ALP+++ FF Y+++K F GL +EL R +SL+Q L +++P T R + +V +G+R D GWF + K +AQD+LVVV+
Sbjct: 655 MHSSKPGSMQVTTAPEPRDILWGNVYLSKGAKRTRSIIGEALILLIITFYVVPVALVSLLVSESALISSSPRLAQLDRASAFFSTGIAMVQPICLVGIQQLLPPLFMQITKAEGLLSFSEAQMKAFSRYFLFQVLNVFLVTSIAGSIFDTVAIIIENPETAFEMLGNALPRMSSFFITYVVMKTFLGLGLELVRIVSLVQAMLRFILFPNSTLRAQRSVRIGMRAIDDPGWFPFHKILAQDMLVVVI 901 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11967.1534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11967.1534.1 >prot_E-fasciculatus_F_contig11967.1534.1 ID=prot_E-fasciculatus_F_contig11967.1534.1|Name=mRNA_E-fasciculatus_F_contig11967.1534.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=239bp MAAEESPEARDIYWFNTRVTQNQRNRRRILVEVFLGLLYVFYVVPVTLLYback to top mRNA from alignment at E-fasciculatus_F_contig11967:1..4070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11967.1534.1 ID=mRNA_E-fasciculatus_F_contig11967.1534.1|Name=mRNA_E-fasciculatus_F_contig11967.1534.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4070bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11967:1..4070+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11967:1..4070+ >mRNA_E-fasciculatus_F_contig11967.1534.1 ID=mRNA_E-fasciculatus_F_contig11967.1534.1|Name=mRNA_E-fasciculatus_F_contig11967.1534.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1434bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11967:1..4070+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |