mRNA_E-fasciculatus_F_contig11957.1528.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11957.1528.1
Unique NamemRNA_E-fasciculatus_F_contig11957.1528.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: D7FLD0_ECTSI (Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD0_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 2.000e-37
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERYPSLY 201
            VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERYPSLY
Sbjct:  378 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERYPSLY 444
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: B7ZGN2_9PHAE (Glucose-6-phosphate dehydrogenase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN2_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.460e-34
Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERYPSLY 201
            VR+ FKDVP+G+F FDDKPLPRNELVM LKP ESIYFKTNVKAPGLAN PIQSELDLSYGERYP LY
Sbjct:   45 VRILFKDVPAGAFAFDDKPLPRNELVMTLKPAESIYFKTNVKAPGLANMPIQSELDLSYGERYPDLY 111
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: A0A7S2Y4P5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4P5_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.530e-21
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERYPSLY 201
            +RVQ+   P+   +FD +P PRNELV+ L+PEE+IYFKTNVKAPGL   P+Q+ELDL+Y  R+P L+
Sbjct:   21 IRVQYHPTPAAMHMFDGQPCPRNELVIVLQPEETIYFKTNVKAPGLRTAPLQTELDLTYESRFPGLF 87
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: A0A7R9YCU6_9STRA (Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCU6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.130e-19
Identity = 38/67 (56.72%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERYPSLY 201
            +R+QFK  P+  F+FD  P+ RNELV++++P E++Y K NVKAPGL  +PI SE+DLSYGERY  +Y
Sbjct:  366 IRIQFKTAPAAGFMFDQFPVSRNELVIRIQPNEAVYLKCNVKAPGLHTEPIVSEMDLSYGERYAEVY 432
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: A0A1W0A1Y8_9STRA (Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1Y8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.780e-18
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERYPSLY 201
            VR+QFK  P  + +F    +PRNELV++L+P E++Y KTNVK+PGL+ KP+ SELDLSY  RY   Y
Sbjct:  355 VRIQFKQAPGATHMFPGVEIPRNELVLRLQPNEAVYMKTNVKSPGLSTKPVASELDLSYNVRYADTY 421
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: A0A7S2TNK6_9EUKA (Glucose-6-phosphate 1-dehydrogenase n=3 Tax=Lotharella TaxID=74819 RepID=A0A7S2TNK6_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 6.900e-18
Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERY-----PSLY 201
            +RVQFK VP    +F D  LPRNELV++L+P ES+Y +TNVKAPGL  +P+Q+ELDL+Y  RY     PS Y
Sbjct:  384 IRVQFKKVPGAPRMFPDDYLPRNELVIRLQPNESVYMRTNVKAPGLMTQPVQNELDLTYKTRYGNVDNPSAY 455
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: A0A067CLI6_SAPPC (Glucose-6-phosphate 1-dehydrogenase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CLI6_SAPPC)

HSP 1 Score: 85.1 bits (209), Expect = 9.290e-18
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERYPSLY 201
            VR+QFK  P  S +F    +PRNELV++L+P E++Y KTNVK+PGL+ K + SELDL+Y ERY   Y
Sbjct:  384 VRIQFKPAPGASHMFPGADIPRNELVLRLQPNEAVYMKTNVKSPGLSTKAVASELDLTYHERYADTY 450
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: A0A485L5K6_9STRA (Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5K6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.250e-17
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERY 189
            VR+QFK+ P  + +F D  +PRNELV++L+P E+IY K+NVK+PGL  KP+ SEL+LSY  RY
Sbjct:  362 VRIQFKEAPGATHMFPDTVIPRNELVLRLQPNEAIYLKSNVKSPGLLTKPVSSELNLSYAARY 424
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: A0A7S0CEZ8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CEZ8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.550e-17
Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERY 189
            +R+QFKD P+  FLFD K  PRNELV+ ++PEESIY K+NVK PG +  P+QSELDL+Y  R+
Sbjct:   91 MRIQFKDAPAADFLFDSKT-PRNELVIVMQPEESIYMKSNVKTPGFSAIPVQSELDLNYDTRF 152
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BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Match: A0A6T6GPL8_9STRA (Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6GPL8_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.880e-17
Identity = 35/63 (55.56%), Postives = 48/63 (76.19%), Query Frame = 1 
Query:    1 VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKPIQSELDLSYGERY 189
            +R+QFKD P+G FLF  K  PRNELVM+++P E++Y KTNVK PG    P+QSEL+++Y  R+
Sbjct:  263 MRIQFKDAPAGQFLFQSKSCPRNELVMRMQPNEAMYLKTNVKKPGFDATPVQSELEINYDTRF 325
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11957.1528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLD0_ECTSI2.000e-37100.00Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Ectoca... [more]
B7ZGN2_9PHAE4.460e-3486.57Glucose-6-phosphate dehydrogenase (Fragment) n=1 T... [more]
A0A7S2Y4P5_9STRA3.530e-2158.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YCU6_9STRA1.130e-1956.72Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Pingui... [more]
A0A1W0A1Y8_9STRA3.780e-1855.22Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Thraus... [more]
A0A7S2TNK6_9EUKA6.900e-1856.94Glucose-6-phosphate 1-dehydrogenase n=3 Tax=Lothar... [more]
A0A067CLI6_SAPPC9.290e-1855.22Glucose-6-phosphate 1-dehydrogenase n=3 Tax=Saprol... [more]
A0A485L5K6_9STRA1.250e-1757.14Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Aphano... [more]
A0A7S0CEZ8_9STRA1.550e-1760.32Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6T6GPL8_9STRA1.880e-1755.56Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Craspe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11957contigE-fasciculatus_F_contig11957:3434..3634 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score139.8
Seed ortholog evalue4.6e-31
Seed eggNOG ortholog2880.D7FLD0
Preferred nameG6PD5
KEGG rclassRC00001,RC00066
KEGG koko:K00036
KEGG ReactionR00835,R02736,R10907
KEGG Pathwayko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230
KEGG ModuleM00004,M00006,M00008
GOsGO:0003674,GO:0003824,GO:0004345,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009507,GO:0009536,GO:0009987,GO:0010035,GO:0010038,GO:0016491,GO:0016614,GO:0016616,GO:0019318,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0046686,GO:0050896,GO:0051156,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564
EggNOG free text desc.glucose-6-phosphate dehydrogenase activity
EggNOG OGsCOG0364@1,KOG0563@2759
EC1.1.1.363,1.1.1.49
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons1
Model size201
Cds size201
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927705.0840535-CDS-E-fasciculatus_F_contig11957:3433..36341622927705.0840535-CDS-E-fasciculatus_F_contig11957:3433..3634Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 3434..3634 +
1695995658.3741179-CDS-E-fasciculatus_F_contig11957:3433..36341695995658.3741179-CDS-E-fasciculatus_F_contig11957:3433..3634Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 3434..3634 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11957.1528.1prot_E-fasciculatus_F_contig11957.1528.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11957 3434..3634 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11957.1528.1

>prot_E-fasciculatus_F_contig11957.1528.1 ID=prot_E-fasciculatus_F_contig11957.1528.1|Name=mRNA_E-fasciculatus_F_contig11957.1528.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=67bp
VRVQFKDVPSGSFLFDDKPLPRNELVMKLKPEESIYFKTNVKAPGLANKP
IQSELDLSYGERYPSLY
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mRNA from alignment at E-fasciculatus_F_contig11957:3434..3634+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11957.1528.1 ID=mRNA_E-fasciculatus_F_contig11957.1528.1|Name=mRNA_E-fasciculatus_F_contig11957.1528.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=201bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11957:3434..3634+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGCGCGTGCAGTTCAAAGACGTACCTTCGGGCTCGTTCCTCTTCGATGA
CAAGCCTCTCCCGCGAAACGAGCTCGTGATGAAGCTCAAGCCGGAGGAGT
CTATCTACTTCAAGACTAACGTCAAGGCACCGGGCCTGGCCAACAAGCCG
ATCCAGTCCGAGCTCGACCTGAGCTACGGGGAGCGCTACCCATCGCTTTA
C
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11957:3434..3634+

>mRNA_E-fasciculatus_F_contig11957.1528.1 ID=mRNA_E-fasciculatus_F_contig11957.1528.1|Name=mRNA_E-fasciculatus_F_contig11957.1528.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=402bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11957:3434..3634+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGCGCGTGCAGTTCAAAGACGTACCTTCGGGCTCGTTCCTCTTCGATGA
CAAGCCTCTCCCGCGAAACGAGCTCGTGATGAAGCTCAAGCCGGAGGAGT
CTATCTACTTCAAGACTAACGTCAAGGCACCGGGCCTGGCCAACAAGCCG
ATCCAGTCCGAGCTCGACCTGAGCTACGGGGAGCGCTACCCATCGCTTTA
CGTGCGCGTGCAGTTCAAAGACGTACCTTCGGGCTCGTTCCTCTTCGATG
ACAAGCCTCTCCCGCGAAACGAGCTCGTGATGAAGCTCAAGCCGGAGGAG
TCTATCTACTTCAAGACTAACGTCAAGGCACCGGGCCTGGCCAACAAGCC
GATCCAGTCCGAGCTCGACCTGAGCTACGGGGAGCGCTACCCATCGCTTT
AC
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