mRNA_E-fasciculatus_F_contig1195.1523.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-fasciculatus_F_contig1195.1523.1
Unique Name	mRNA_E-fasciculatus_F_contig1195.1523.1
Type	mRNA
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)

Homology

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: A0A6H5KDJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ5_9PHAE)

HSP 1 Score: 550 bits (1417), Expect = 6.810e-191
Identity = 301/375 (80.27%), Postives = 314/375 (83.73%), Query Frame = 2

Query:  374 TGTNAEASTIGASICAERAAMCKLREESDCKRVTKVVVVTDHQHPLAP---------------GVLCREFLSAHLCPSTPVIMSGSGEAIIPGGLLYEEPNLKPSPDPAKNGGRVAAGSGAALAAGESAVATCGCETAP-AGDGKHAGAARPXXXXXXXXXXXXXXXSSSCDARIIGAASVDKGKGGGREQLHVGRNEGAAPVPMDVATVGELYPWRNMYGVTERGGQLKLGFLVQQGAEELSDPSLAERVGLESGVAEAYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHEPGGGVVVIKAK 1450
            TGTNAE+STIG+SICAERAAMCKLREES+CKRVTKVVVVTD+QHPLAP               GVLCREFLSAHL PSTPV+MSGSGEAIIPGGLLYEE NLKP PD AK GG  A GSGA L AGE+AV TCGCETAP AGDGKHAGAA P                SSCD RI+ AASV++G+GGGR Q        AAP+ MDV+TVGELYPWRNMYGVTERGGQLKLGFLVQQ AEELSDP+LAERVGLE GV EAYDAAWRATA DDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHE GGGVVVIKAK
Sbjct:    5 TGTNAESSTIGSSICAERAAMCKLREESNCKRVTKVVVVTDYQHPLAPDTLERFRFVLFCVTQGVLCREFLSAHLRPSTPVVMSGSGEAIIPGGLLYEESNLKPWPDSAKTGGG-ATGSGA-LVAGEAAVDTCGCETAPPAGDGKHAGAATPPAASPSPY--------SSCDTRIL-AASVERGEGGGRAQSGGSEGAKAAPLRMDVSTVGELYPWRNMYGVTERGGQLKLGFLVQQKAEELSDPNLAERVGLERGVVEAYDAAWRATAGDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHEAGGGVVVIKAK 368

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: D8LU67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU67_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 1.520e-189
Identity = 304/365 (83.29%), Postives = 316/365 (86.58%), Query Frame = 2

Query:  368 RITGTNAEASTIGASICAERAAMCKLREESDCKRVTKVVVVTDHQHPLAPGVLCREFLSAHLCPSTPVIMSGSGEAIIPGGLLYEEPNLKPSPDPAKNGGRVAAGSGAALAAGESAVATCGCETAP-AGDGKHAGAARPXXXXXXXXXXXXXXXSSSCDARIIGAASVDKGKGGGREQLHVGRNEGAAPVPMDVATVGELYPWRNMYGVTERGGQLKLGFLVQQGAEELSDPSLAERVGLESGVAEAYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHEPGGGVVVIKAKELV 1459
            R TGTNAEASTIG+SICAERAAMCKLREES+CKRVTKVVVVTDHQHPLAPGVLCREFLSAHLCPSTPVIMSGSGEAI+PGGLLYEEPNLKPSPD AKNGG  A GSGA L AGE+AV TCGCE AP AGDG+HAGAA P   XXXXXXXXXXXX             V  G            NEGAAP P+DV+TVG+LYPW+NMYGVTERG QLKLGFL QQ AEELSDP+LAERVGLESGV EAYDAAWRATA DDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGA+LDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHE GGGVVVIKAK L+
Sbjct:    3 RPTGTNAEASTIGSSICAERAAMCKLREESNCKRVTKVVVVTDHQHPLAPGVLCREFLSAHLCPSTPVIMSGSGEAIVPGGLLYEEPNLKPSPDSAKNGGG-ATGSGA-LVAGEAAVDTCGCEAAPPAGDGRHAGAATPAAAXXXXXXXXXXXXXXXXXXXXXXXXRVQSGG-----------NEGAAPAPVDVSTVGQLYPWKNMYGVTERGEQLKLGFLAQQKAEELSDPNLAERVGLESGVVEAYDAAWRATAGDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGASLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHEAGGGVVVIKAKALL 354

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: A0A835ZD32_9STRA (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD32_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.170e-53
Identity = 142/407 (34.89%), Postives = 177/407 (43.49%), Query Frame = 2

Query:  263 VAAAHELRRKLVPPHQSLFRVVCILVYEDFSGRLHRITGTNAEASTIGASICAERAAMCKLREESDCKRVTKVVVVTDHQHPLAPGVLCREFLSAHLCPSTPVIMSGSGEAIIPGGLLYEEPNLKPSPDPAKNGGRVAAGSGAALAAGESAVATCGCETAPAGDGKHAGAARPXXXXXXXXXXXXXXXSSSCDARIIGAASVDKGKGGGREQLHVGRNEGAAPVPMDVATVGELYPWRNMYGVTERGGQLKLGFLVQQGAEELSDPSLAERVGLESGVAE--------------------------------------AYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMM-RRAKDGIRTSWVLLVDQFGNLHAPFAQAR 1366
            V  AH LRR L PPHQS FRVVC++ YED  G  H +TGTNAE   IG SICAERAA+CKLRE     RV  V VVTD   PL P VLCREFL+ HL P   VIMSG+             P                                                                   SSC  R +  A  D                      ++   +G+LYP+  +YGVT+R   L+ GF   + A+  +  +  + +GL + VA                                       AY+ A R TA D KD +HP+RYAAV ++ DG +   HQLKA EYG+TLDPV+ L   M+ R+  DG+R + +  VDQFGN HAPFA AR
Sbjct:   29 VTMAHRLRRSLEPPHQSRFRVVCVIEYEDDGGATHVVTGTNAEPGYIGGSICAERAALCKLREAPFVARVASVTVVTDADAPLCPSVLCREFLATHLDPDVTVIMSGASXXXXXXXXXLTSP-------------------------------------------------------------------SSCLDRGMKTADEDS---------------------VETCRIGDLYPFPCIYGVTDREALLRHGFEFARRAD--APETAIKTLGLSAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLLSLAYELAQRETARDAKDALHPLRYAAVVVYEDGTSAAAHQLKAAEYGSTLDPVSQLLRGMLDRKLDDGVRATHI--VDQFGNCHAPFAPAR 343

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: A0A4D9DAD1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAD1_9STRA)

HSP 1 Score: 135 bits (341), Expect = 8.560e-32
Identity = 121/417 (29.02%), Postives = 168/417 (40.29%), Query Frame = 2

Query:  242 EEDNAALVAAAHEL------RRKLVPPHQSLFRVVCILVYEDFSGRLHRITGTNAEASTIGASICAERAAMCKLREESDCKRVTKVVVVTDHQHP-LAPGVLCREFLSAHLCPSTPVIMSGSGEAIIPGGLLYEEPNLKPSPDPAKNGGRVAAGSGAALAAGESAVATCGCETAPAGDGKHAGAARPXXXXXXXXXXXXXXXSSSCDARIIGAASVDKGKGGGREQLHVGRNEGAAPVPMDVATVGELYPWRNMYGVTERGGQLKLG-FLVQQGAEELSDPSLAERVGLESGVAEAYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLV-DQFGNLHAPFAQARTFLSEHGFGETKVAIHEPGGG-VVVIKAKELVP 1462
            E D A    A H L      R KL+PP+QS FRVV ++VY++  G ++ + GTN+E   I  SICAERAA+  LR       + ++ VV+D  H  L PG+LC+EFLS+                                                                  AGD                            D RI+ A +V                       +   T+G LYP+ ++Y  T+R   +  G   V +G E   +    E++         Y     +TA DDKD++HPIRYAA   F+DG   +  Q K  EYG T+D V  LA AM  R   G+    +LL  DQFG LHAP   AR FL E+ +G+  + +HE   G ++ +   E  P
Sbjct:   15 EGDGAIAAEACHMLKVINKYRTKLIPPYQSHFRVVAVIVYKNGQGDINHVCGTNSEPCMISGSICAERAALAALRHVPPPVTLLRLYVVSDQTHEALFPGILCKEFLSSM-----------------------------------------------------------------AGD----------------------------DLRILVANAVT--------------------TDVRCLTLGALYPYASLYRHTDRNTLVITGEAFVAKGIEIPQNGGPQEKL---------YREVLDSTARDDKDELHPIRYAAGVRFADGIQVVAWQKKGLEYGTTIDAVVQLAHAMEWRRGQGLPGPILLLQSDQFGILHAPSGHARGFLMEYDYGDLPLLVHETSSGKLLTLTVSETAP 309

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: W7TKW2_9STRA (Mannosyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKW2_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.100e-30
Identity = 120/417 (28.78%), Postives = 170/417 (40.77%), Query Frame = 2

Query:  242 EEDNAALVAAAHEL------RRKLVPPHQSLFRVVCILVYEDFSGRLHRITGTNAEASTIGASICAERAAMCKLREESDCKRVTKVVVVTDHQHP-LAPGVLCREFLSAHLCPSTPVIMSGSGEAIIPGGLLYEEPNLKPSPDPAKNGGRVAAGSGAALAAGESAVATCGCETAPAGDGKHAGAARPXXXXXXXXXXXXXXXSSSCDARIIGAASVDKGKGGGREQLHVGRNEGAAPVPMDVATVGELYPWRNMYGVTERGGQLKLG-FLVQQGAEELSDPSLAERVGLESGVAEAYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLV-DQFGNLHAPFAQARTFLSEHGFGETKVAIHEPGGG-VVVIKAKELVP 1462
            E D+A    A H L      R KL+PP+QS FRVV ++VY++  G ++ + GTN+E   I  SICAERAA+  LR       + ++ VV+D  H  L PG+LC+EFLS+         M+G    I+                                      VA  G                                  + D R +                                T+G LYP+ ++Y  T+R   +  G   + +G E   +    E++         Y     +TA DDKD++HPIRYAA   F+DG   +  Q K  EYG T+D V  LA AM  R   G+    +LL  DQFG LHAP   AR FL E+ +G+  + +HE   G ++ +   E  P
Sbjct:   52 EGDSAIAAEACHMLKLINNYRTKLIPPYQSQFRVVAVIVYKNGQGDINHVCGTNSEPCMISGSICAERAALAALRHVPPPVTLLRLYVVSDQTHEALFPGILCKEFLSS---------MAGDDLRIL--------------------------------------VANAG----------------------------------TTDIRCL--------------------------------TLGALYPYASLYRHTDRNKLVVTGEAFIAKGMEIPQNDGPEEKL---------YREVLDSTARDDKDELHPIRYAAGVRFADGIQVVAWQKKGLEYGTTIDAVVQLAHAMEWRRGQGLPGPILLLQSDQFGILHAPSGHARGFLMEYDYGDLPLLVHETSSGKLLTLTVSETAP 346

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: A0A7S3ADN8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ADN8_9EUKA)

HSP 1 Score: 112 bits (279), Expect = 1.270e-24
Identity = 67/184 (36.41%), Postives = 102/184 (55.43%), Query Frame = 2

Query:  923 AAPVPMDVATVGELYPWRNMYGVTERGGQL----KLGFLVQQGAEELSDPSLAERVGLESGVAEAYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHEPGGGVVVIKAKELVP 1462
            A P    V T+GEL+P+ + Y    R  QL    +LG LV+        P ++  +G +S     + AA+ A A DD++D+HP+R+ A  +F  GE     Q+KA EYG ++DPV  LAP + +  +   + + V +VDQFG  HAPFA  R +L EHG+G  ++ +H   G +    A +L+P
Sbjct:   28 AGPRSRTVRTLGELWPYASPYTRLSRAEQLACGERLGPLVR--------PQMSSLLGDDSSC---WRAAFEAAAADDRNDVHPVRFGAAVVFEGGEVAWAWQVKALEYGCSMDPVCQLAPLIAKATR---KPTVVCMVDQFGVAHAPFATGRAYLIEHGWGTVRLLVHTAAGLLQRPTADDLMP 197

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: A0A7S1I1R9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I1R9_9EUGL)

HSP 1 Score: 107 bits (267), Expect = 2.210e-22
Identity = 75/177 (42.37%), Postives = 96/177 (54.24%), Query Frame = 2

Query:  947 ATVGELYPWRNMYGVTERGGQLKLGFLVQQGAEELSDPSLAERVGLESGVAEAYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAK----DGIRTSWVLL-VDQFGNLHAPFAQARTFLSEHGFGETKVAIHEPGGGVVVIKAKELVP 1462
            AT+ EL+P  ++Y    R   +         AEELS     + VG +    + Y AA +AT+ D+KD++HPIRYAA  LF D   E+  Q KA EYG T+D VT L   +   AK    D  R   VL+ VDQFG LHAPFAQ R  LSE+GFG     +H   G +  I   +LVP
Sbjct:   92 ATLEELHPCASLYAKVPRDKVVSF-------AEELSG-RCTKAVGKDRWN-KVYLAALQATSHDNKDELHPIRYAAAVLFDDDTYEVAWQDKAVEYGNTIDAVTKLFHLIQSVAKWVPADSARAPQVLMHVDQFGILHAPFAQPRALLSENGFGSIVCPVHRMDGTLGTITIADLVP 259

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: D0N581_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N581_PHYIT)

HSP 1 Score: 99.0 bits (245), Expect = 3.340e-19
Identity = 60/161 (37.27%), Postives = 86/161 (53.42%), Query Frame = 2

Query:  944 VATVGELYPWRNMYGVTERGGQLKLGFLVQQGAEELSDPSLAERVGLESGVAEAYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHEPGG 1426
            V T+ ELYP+ ++Y    R  QL+L  +                        E Y  A  ATA+D +DD+ P+RYAA   FSDGE   T Q K  EYG++LD V+ L P  +   ++ ++  +++ VDQFG LHAPFA+AR +  E GF +  V +H+  G
Sbjct:  131 VTTLAELYPFPSLYDRVPRS-QLQLSRMTPD-------------------EQEVYLKALAATAKDARDDLFPLRYAAGTKFSDGEVRATWQHKTLEYGSSLDAVSKLIP-FVEAKQNSVKPQFLMQVDQFGILHAPFARARAYFFEFGFLDVPVLVHDANG 270

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: A0A0L0DEZ7_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DEZ7_THETB)

HSP 1 Score: 100 bits (249), Expect = 4.380e-19
Identity = 76/217 (35.02%), Postives = 105/217 (48.39%), Query Frame = 2

Query:  917 EGAAPVPMDVATVGELYPWRNMYGVTERGGQLKLGFLVQQGAEELS---------------DPSL----AERVGLE---------SGVAEA-----YDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIH--EPGGGVVVIKAKELVP 1462
            EG  P  +++ TVGELYP+  +Y    R       + V   AE LS               D S     ++  G+E         SGVA +       A    TA D++D +HPIRYAA ALF DG      + KA EYGAT++PV  +A A+      G +   + ++DQ+G LH PFA +R FL E  +G   V +H  E  G +VV  A +L+P
Sbjct:  136 EGPVPCEINITTVGELYPFPPVYRCISR-------YEVLNAAEALSAAVAPWWAGSLSVDSDDSXXXXXSDAQGIEARLGSVAAASGVATSDVYRMLKAIHAETARDNRDILHPIRYAAGALFDDGSIVTGCETKALEYGATINPVIKIAKALEDAHDAGRKVLLLAVMDQYGVLHGPFADSRAFLHEGPWGAVPVVVHNSEGDGALVVTAASDLIP 345

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Match: A0A0W8D0F9_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D0F9_PHYNI)

HSP 1 Score: 98.2 bits (243), Expect = 5.690e-19
Identity = 60/163 (36.81%), Postives = 87/163 (53.37%), Query Frame = 2

Query:  944 VATVGELYPWRNMYGVTERGGQLKLGFLVQQGAEELSDPSLAERVGLESGVAEAYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDPVTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETKVAIHEPGGGV 1432
            V T+ ELYP+ ++Y    R   L         A +        R  +     E Y  A  AT +D +DD+ P+RYAA   FSDGE  +T Q K  EYG++LD V+ L P  +   ++ I+  +++ VDQFG LHAPFA+AR +  E GF +  V +H+  G +
Sbjct:  116 VTTLAELYPFPSLYDRVPRSQVLPF-------ARKFCSRLQLSR--MTPNEKEVYLKALAATEKDARDDLFPLRYAAGTKFSDGEVRVTWQHKTLEYGSSLDAVSKLIP-FVEAKQNSIKPQFLMQVDQFGILHAPFARARAYFFEFGFLDVPVLVHDAEGAL 268

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1195.1523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KDJ5_9PHAE	6.810e-191	80.27	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LU67_ECTSI	1.520e-189	83.29	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZD32_9STRA	1.170e-53	34.89	CMP/dCMP-type deaminase domain-containing protein ...	[more]
A0A4D9DAD1_9STRA	8.560e-32	29.02	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
W7TKW2_9STRA	8.100e-30	28.78	Mannosyltransferase n=1 Tax=Nannochloropsis gadita...	[more]
A0A7S3ADN8_9EUKA	1.270e-24	36.41	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]
A0A7S1I1R9_9EUGL	2.210e-22	42.37	Hypothetical protein n=1 Tax=Eutreptiella gymnasti...	[more]
D0N581_PHYIT	3.340e-19	37.27	Uncharacterized protein n=2 Tax=Phytophthora infes...	[more]
A0A0L0DEZ7_THETB	4.380e-19	35.02	Uncharacterized protein n=1 Tax=Thecamonas trahens...	[more]
A0A0W8D0F9_PHYNI	5.690e-19	36.81	Uncharacterized protein n=1 Tax=Phytophthora nicot...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1195	contig	E-fasciculatus_F_contig1195:14154..19471 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	547.7
Seed ortholog evalue	4.7e-153
Seed eggNOG ortholog	2880.D8LU67
EggNOG OGs	2CYIE@1,2S4MG@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Cytidine deaminase-like
Ec32 ortholog	Ec-16_000420.1
Exons	8
Model size	1828
Cds size	1281
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1195.1523.1	prot_E-fasciculatus_F_contig1195.1523.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig1195 14499..19269 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927704.5572476-UTR-E-fasciculatus_F_contig1195:14153..14498	1622927704.5572476-UTR-E-fasciculatus_F_contig1195:14153..14498	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1195 14154..14498 -
1695995658.0711145-UTR-E-fasciculatus_F_contig1195:14153..14498	1695995658.0711145-UTR-E-fasciculatus_F_contig1195:14153..14498	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1195 14154..14498 -
1622927704.6792514-UTR-E-fasciculatus_F_contig1195:19269..19471	1622927704.6792514-UTR-E-fasciculatus_F_contig1195:19269..19471	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1195 19270..19471 -
1695995658.164122-UTR-E-fasciculatus_F_contig1195:19269..19471	1695995658.164122-UTR-E-fasciculatus_F_contig1195:19269..19471	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1195 19270..19471 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig1195:14154..19471-
coding sequence from alignment at E-fasciculatus_F_contig1195:14154..19471-

protein sequence of mRNA_E-fasciculatus_F_contig1195.1523.1

>prot_E-fasciculatus_F_contig1195.1523.1 ID=prot_E-fasciculatus_F_contig1195.1523.1|Name=mRNA_E-fasciculatus_F_contig1195.1523.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=427bp
MAAESDISGAGLGEEDNAALVAAAHELRRKLVPPHQSLFRVVCILVYEDF
SGRLHRITGTNAEASTIGASICAERAAMCKLREESDCKRVTKVVVVTDHQ
HPLAPGVLCREFLSAHLCPSTPVIMSGSGEAIIPGGLLYEEPNLKPSPDP
AKNGGRVAAGSGAALAAGESAVATCGCETAPAGDGKHAGAARPATATATA
TATAATSPSSSCDARIIGAASVDKGKGGGREQLHVGRNEGAAPVPMDVAT
VGELYPWRNMYGVTERGGQLKLGFLVQQGAEELSDPSLAERVGLESGVAE
AYDAAWRATAEDDKDDIHPIRYAAVALFSDGEAEITHQLKAFEYGATLDP
VTLLAPAMMRRAKDGIRTSWVLLVDQFGNLHAPFAQARTFLSEHGFGETK
VAIHEPGGGVVVIKAKELVPGVTTAR*

mRNA from alignment at E-fasciculatus_F_contig1195:14154..19471-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig1195.1523.1 ID=mRNA_E-fasciculatus_F_contig1195.1523.1|Name=mRNA_E-fasciculatus_F_contig1195.1523.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5318bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1195:14154..19471- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GATAGACCGAGGGCGTTCGCGTATTATTTCTTTCTCGACGTCCGAAACTG
CCGCGAATGTGCCTAGCTCCGGCGGTGTTGGAGATCCCTCTCGGTGGCGT
CGGTTACCGATATCCCTCGCAGGAGTCTCCGTCGTAGCCACGGGCGGCGT
GATCCTGGCGTGTCTATCGGCTACGAGTGGCTCAAGACCGAGTGCTACCG
CCATGGCTGCCGAGTCGGACATCTCAGGCGCTGGTTTAGGAGAGGAGGAC
AACGCTGCGCTGGTTGCGGCAGCCCACGAGCTCCGACGGAAGCTGGTTCC
ACCGCACCAGAGCTTGTTCCGTGTGGTGTGCATCCTCGTCTACGAGGACT
TCTCGGGCAGGCTGCATCGCATCACCGGCGAGTAGGTGTGCTGCTGCTGT
ATTGTGCTGCTGCGTGGGGTGGAAGAGTGCGTACTGCGGCGCATCGGGGG
TGTTCCGACGCACATCATCAATGCGCGCTCGAAATCGTGCTGTCTGTCTG
TCTGTCTGTCTGTCTGTCTGTCTTCTCTCTATAGTAGTGCCCTCGACGAT
GTTTGGCACGACCTCTAGTGCCATGTCAAAGTTCCCTATAATAGTTGTGG
ATGTGGACTCCCCTTGACTGTGTGCCGCAGCGCCCTTTCGTGAAGCACTT
TCGTGAAGCACGTTCTTGTGTTCTTGTGCTCCCCCGTGCGGTGTCCGGTG
TGATGTTCGCCCATACGGCCTGCCCGGGGCGCTGCTACTGCGTGAGACGT
ACTGCTGTTCCCGTAGGTGTTTGTGCGACGGAACGAAGTTTCGTGCATAG
CAACATCTTTTTGGCGGCATGTGGCCGGCTTGCGGCAATCGGTGGCCCTG
TTCGAGCTATTATTTTTCAGACAGACACGCGCTAGTGGGCGAATCGTGCC
GTCCCCAGCCCCTATTTAGTGTGCCCAAGCGTTGCGCCTACAGCTGTTTT
CGTGTATGCCGGCATTTCCACATACCAGCCAGCCAGCCACCCCAAGTCAC
CGTTGAAACACCGATGCCATCGCTTCGACTACAGGAACGAACGCAGAGGC
CAGTACGATCGGGGCTTCCATCTGCGCCGAGCGTGCGGCCATGTGCAAGC
TTCGCGAGGAGAGCGATTGCAAACGCGTGACTAAGGTCGTCGTCGTCACA
GACCACCAACACCCTTTGGCGCCCGGTAGGTGCAGTAGGTGCAGCGCTGC
TGTGACTCCCCTCCCCTCCCCTCCTGTGGCGTGTCCCGCGACTAGCACTC
GTCGGTCGGTGGCGCGAGTCTTTCTGTTGCTTGAAGCAGGCAATCCTCTT
CAAGTCGGGGCCCTGCCGGCATCAGAAGTGTTGTACACACGGCGATGGTC
AGGCTTTCGACGGGACAGCCTTTCATTCGCAACTCACCTGTAGGCCTTTA
GGTGTACTGTAATAAGCTGGCCGCAGCTGTAGTAGGCTGGCCGCGGCCGT
AGAGTGGTTTAGGTGGCGTGATACACACAGCAGCGGTCTCCGCGTGGGTT
TGTGTTTTGTGCGTCTGTCTGCCGAGATTCGAAGTTTCGCATGAGCTTTT
TCCCGCCCGTATCGCTTGTTTTTTGTGGGCCGCCAGGAAAGAATTCTGCT
TGGTGTTTGTGTGCCATGCCGACGAGAGACAGAGAATTTCTCGCGTCCCC
ACCCCTATAACCGACATCCTCGAACAATCATTTGATTCCGTTTGGTGCTT
TTCTTTTCTGCGTGACTCAGGTGTGTTGTGCAGGGAGTTCCTGTCTGCCC
ACCTCTGTCCGTCCACTCCGGTCATCATGTCCGGCTCCGGCGAAGCCATT
ATCCCGGGCGGACTGCTGTACGAGGAGCCAAACCTCAAGCCTTCACCGGA
TCCGGCTAAGAATGGCGGGCGTGTTGCCGCCGGCTCAGGAGCAGCGCTCG
CTGCTGGGGAGTCGGCGGTTGCTACCTGCGGCTGCGAGACAGCACCAGCT
GGCGACGGGAAACACGCAGGGGCAGCGAGACCGGCTACTGCTACTGCTAC
TGCTACTGCTACTGCTGCGACGAGCCCTTCTTCTTCGTGCGATGCACGCA
TCATCGGAGCGGCGAGTGTCGACAAGGGCAAGGGAGGAGGACGAGAGCAG
TTACATGTAGGAAGAAACGAAGGAGCTGCGCCTGTGCCGATGGATGTCGC
CACCGTGGGGGAACTGTACCCGTGGAGGAACATGTACGGGGTCACGGAGA
GAGGAGGGCAGCTCAAGCTTGGCTTCCTGGTGCAGCAGGTGATGGCCCGA
ACCGCTCCGACTTAGGACGGGGTTTTCGACTTTCGGTGGTGACTTCGCCC
GATAAGCGGACACTTTGTACCCCTTCGGTTGTCGCTGGGCACAAACGTTT
TAGCTCATTGCCGGTGATTTTGATGGAATGGAGTGCTATTTTAGGGCACC
GCACGAGAGCAGCTTGGTATTGTTGGGACCTACCCCTGAGTTTTGCGCAT
CTGGGAGCTGCGACAGAGTAAACGAAGGTATTGTACGATAAATATGCTGG
CAACATTGCTGTCTGTCGTGGACTTGGTGTTCGTGACACGTCGTCGTGTT
TTCATCAAATTTGGGTTGCATTCCACTCGTCCAGACCCTAAACCGAATAC
AATCCGACACGACACGTTCGCGGGTCTTTGGTCTTTGCTTTGTTTTGACC
CGGTTCAGCTCTAGCTTGTCGCTTTCTGAATCTCTTTGTCCCGGTATGCA
TCGTTCGCTTTTGTGCACGCCAATGCGGCGTAGTAGGGGGCGGAAGAACT
GTCGGATCCGAGCCTGGCAGAGCGAGTAGGGCTAGAGAGCGGTGTCGCTG
AAGCCTACGACGCCGCGTGGAGAGCAACTGCCGAAGACGACAAAGACGAT
ATTCATCCCATAAGGTACAGCAGTACCTCCGTACATGGATGCATCGCTGC
AGTGGCGTGCGATGTTGTCTAACTGTTGTATTGCAACATGTTCGTGTTCC
ACTGCCCAACTGTTTTTGTCGCATTAGACTAGACTATGCCTCTGTGACGC
AACGATTCGAGTATGCGGGAACAACTGCACTTTCACCGTTTCGTGTGTAC
ACTACACGCGGAGGAAAAGTTTTCATGCTCAAGAGGATAACATTGGCGAT
ACCGAGGATGCGCGATAGGGGAGAATCTCTTCGGGTGTACTGTAGATTGG
TTCAGTGGTCCTCCCGTTGACATTGACAACGCTCCGCTTGGAACCTAACC
GGTTACACCCGCGTCTACTCTGGCGTGTAGCGATGGGTCGTAACTCAGCC
CAACCATGTCCACAGCTGAACAGATTTTTGCTGAATTTTGTCGAGACTTG
CACCCCTCTATCGTGTCCTGGCACCTTTCCCCCATAGGTACGCGGCGGTG
GCCCTGTTCTCTGATGGGGAAGCTGAGATAACTCACCAGGTGGGTGCGTT
TCGATCGATCGCTCGCGATCATCGCTAAAGCGTGGTTACTGTGTTGCAAG
TGCCCCGCGTCCGGTGGCTGTAGCGATGATAGGCCAGCACGCAACGCCAT
TCCCGGCCTCGGTTTCTCTCTTTTTCGTTCGACTCACAGACGTGGCCTGT
ACGCGTGACCAGGCGTGACGTCTTCGTACGTTCGCGATCACGCAGCATGC
ATCATGTTTTCTGAGAGGCGTGCTTGTCAGCAAATGCTTGAGGGTACGAT
AGTAGCGGCGCAGCCGAAGCTACGCGCGTTCAGTCAGAACATTCCAGGGC
TGGAAGAGGTAGAGGGGGTTTGCTTCCTTCCTGTTGGTCGTTGGCTTCCT
GGGTGAACCATATGATTCGTCAATCACCTCGGCCTGATGAGCGGCATATC
GCACGTCCCCTCGCTACCGCGCATTTCACATACTTGTGTGGCTGTCGTCC
ACCCTTGAAACCACGACTGACCGGCGGACTGTTTGTTCTTGTGATGACCC
TAACTGGCGATTTGAGCGATTGATTTTCTTCGGTGTGCGATGCGCATTTT
CCTTTCCTCCGCAGCTGAAGGCCTTCGAGTACGGGGCAACCCTAGACCCC
GTGACTCTTCTCGCCCCCGCGATGATGAGGCGCGCCAAGGACGGGATACG
GTAAGTTTAAGGTGTGCGTAATATGTGCTTTTTTTTCCACACTGGTAGTA
TCCACGCCATGGCGCCTTGTATGCTTACTGCCTACGCGGGCGCGGAGTTG
ATAGGTTGCACAACAGCCCCATTCCGATAACTGTTGGTTGATTGCCACCG
GCACTTCTCAAGCAGCGATTGCACATTGCCTTCGGTTTATCGCCGACGCA
TGGTAGAGCAAATCCCGTGACCGCGGGAAAAGTGTATCGCCATCTCCCAT
CCGATAGGGCTAGTGTAAGGGTTCGGGGCACCAGAAGCCTATGCGAGCCA
TCATTCGTGCACTCTGCTCTTTACGCGAGTTCGTCCTCGAACAATCGGAG
GCGAGATCGACCGCACCGTCGTAATGCTAGGTCAACTGCCACCGTATCTA
GCTGAAATTGTCGTCCACCGCTCTCAGGACTTCCTGGGTGCTTCTGGTGG
ACCAGTTCGGCAACTTGCATGCGCCATTCGCCCAAGCCCGGACGTTTCTT
TCTGAGCATGGGTTCGGAGAGACGAAAGTCGCCATCCATGAACCAGGCGG
CGGTGTGGTTGTGATCAAGGCTAAAGGTAAGCCCGTCGCATGCTTTGGCC
TTCGTATGCATAAAGACCTCTTAACAAGTTTGACGCGATAAGGCACGAGT
TAATTCATGTGCTGGCAAACACCTTGACAGCCAACTGACTGCTGTTGCTG
CTTTACACAGCCGAAACAAGCGCGTGTGCCACGAGGAGGTTGCAATTTTT
ATCTGGCATTCCGCACGACAATCGTGTTTCGAGACCGGAAAGTATCGCCA
GTTGCCCTCACCCCCCCCTCCCCCCCTCCGCGAACGTTGATCCGAAACGC
TTCACCGCCCGTTTCTTCTTTCTTTCATCATGCCGTGAAAGAACTGGTCC
CAGGGGTGACGACAGCGAGATGAGCTCTGGCGAAGGATGTGCTTCTTTGC
TACTTCGAGTACAATCTAGCGCGTGGCAACACGAAGATGCGTGGCACCGC
GCCTTACCGGCCTGTCTGTGTCAATGGCAATGTGTGTGCGCGTGGTGTTT
GTCGTTCCTTTAATCGTTAAGGAGGGAGGGAGGATCATGCTCAGGGTGGT
TATCCTTCGTATCATCAGATGAGTGTCTGGACACATACCATTTCTGTTCA
CAAAGGATGAAACACGTAAAAAGTAGAAGTGTATTGGTAGAACGGCCACG
GACGAAAACCCATCTTGGTTCAGGTATCTAGCACCCATCTGAAGTTACGT
GGGGAAAGCAATCCGAGG

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1195:14154..19471-

>mRNA_E-fasciculatus_F_contig1195.1523.1 ID=mRNA_E-fasciculatus_F_contig1195.1523.1|Name=mRNA_E-fasciculatus_F_contig1195.1523.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2562bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1195:14154..19471- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCTGCCGAGTCGGACATCTCAGGCGCTGGTTTAGGAGAGGAGGACAA
CGCTGCGCTGGTTGCGGCAGCCCACGAGCTCCGACGGAAGCTGGTTCCAC
CGCACCAGAGCTTGTTCCGTGTGGTGTGCATCCTCGTCTACGAGGACTTC
TCGGGCAGGCTGCATCGCATCACCGATGGCTGCCGAGTCGGACATCTCAG
GCGCTGGTTTAGGAGAGGAGGACAACGCTGCGCTGGTTGCGGCAGCCCAC
GAGCTCCGACGGAAGCTGGTTCCACCGCACCAGAGCTTGTTCCGTGTGGT
GTGCATCCTCGTCTACGAGGACTTCTCGGGCAGGCTGCATCGCATCACCG
GAACGAACGCAGAGGCCAGTACGATCGGGGCTTCCATCTGCGCCGAGCGT
GCGGCCATGTGCAAGCTTCGCGAGGAGAGCGATTGCAAACGCGTGACTAA
GGTCGTCGTCGTCACAGACCACCAACACCCTTTGGCGCCCGGAACGAACG
CAGAGGCCAGTACGATCGGGGCTTCCATCTGCGCCGAGCGTGCGGCCATG
TGCAAGCTTCGCGAGGAGAGCGATTGCAAACGCGTGACTAAGGTCGTCGT
CGTCACAGACCACCAACACCCTTTGGCGCCCGGTGTGTTGTGCAGGGAGT
TCCTGTCTGCCCACCTCTGTCCGTCCACTCCGGTCATCATGTCCGGCTCC
GGCGAAGCCATTATCCCGGGCGGACTGCTGTACGAGGAGCCAAACCTCAA
GCCTTCACCGGATCCGGCTAAGAATGGCGGGCGTGTTGCCGCCGGCTCAG
GAGCAGCGCTCGCTGCTGGGGAGTCGGCGGTTGCTACCTGCGGCTGCGAG
ACAGCACCAGCTGGCGACGGGAAACACGCAGGGGCAGCGAGACCGGCTAC
TGCTACTGCTACTGCTACTGCTACTGCTGCGACGAGCCCTTCTTCTTCGT
GCGATGCACGCATCATCGGAGCGGCGAGTGTCGACAAGGGCAAGGGAGGA
GGACGAGAGCAGTTACATGTAGGAAGAAACGAAGGAGCTGCGCCTGTGCC
GATGGATGTCGCCACCGTGGGGGAACTGTACCCGTGGAGGAACATGTACG
GGGTCACGGAGAGAGGAGGGCAGCTCAAGCTTGGCTTCCTGGTGCAGCAG
GTGTGTTGTGCAGGGAGTTCCTGTCTGCCCACCTCTGTCCGTCCACTCCG
GTCATCATGTCCGGCTCCGGCGAAGCCATTATCCCGGGCGGACTGCTGTA
CGAGGAGCCAAACCTCAAGCCTTCACCGGATCCGGCTAAGAATGGCGGGC
GTGTTGCCGCCGGCTCAGGAGCAGCGCTCGCTGCTGGGGAGTCGGCGGTT
GCTACCTGCGGCTGCGAGACAGCACCAGCTGGCGACGGGAAACACGCAGG
GGCAGCGAGACCGGCTACTGCTACTGCTACTGCTACTGCTACTGCTGCGA
CGAGCCCTTCTTCTTCGTGCGATGCACGCATCATCGGAGCGGCGAGTGTC
GACAAGGGCAAGGGAGGAGGACGAGAGCAGTTACATGTAGGAAGAAACGA
AGGAGCTGCGCCTGTGCCGATGGATGTCGCCACCGTGGGGGAACTGTACC
CGTGGAGGAACATGTACGGGGTCACGGAGAGAGGAGGGCAGCTCAAGCTT
GGCTTCCTGGTGCAGCAGGGGGCGGAAGAACTGTCGGATCCGAGCCTGGC
AGAGCGAGTAGGGCTAGAGAGCGGTGTCGCTGAAGCCTACGACGCCGCGT
GGAGAGCAACTGCCGAAGACGACAAAGACGATATTCATCCCATAAGGGGG
CGGAAGAACTGTCGGATCCGAGCCTGGCAGAGCGAGTAGGGCTAGAGAGC
GGTGTCGCTGAAGCCTACGACGCCGCGTGGAGAGCAACTGCCGAAGACGA
CAAAGACGATATTCATCCCATAAGGTACGCGGCGGTGGCCCTGTTCTCTG
ATGGGGAAGCTGAGATAACTCACCAGGTACGCGGCGGTGGCCCTGTTCTC
TGATGGGGAAGCTGAGATAACTCACCAGCTGAAGGCCTTCGAGTACGGGG
CAACCCTAGACCCCGTGACTCTTCTCGCCCCCGCGATGATGAGGCGCGCC
AAGGACGGGATACGCTGAAGGCCTTCGAGTACGGGGCAACCCTAGACCCC
GTGACTCTTCTCGCCCCCGCGATGATGAGGCGCGCCAAGGACGGGATACG
GACTTCCTGGGTGCTTCTGGTGGACCAGTTCGGCAACTTGCATGCGCCAT
TCGCCCAAGCCCGGACGTTTCTTTCTGAGCATGGGTTCGGAGAGACGAAA
GTCGCCATCCATGAACCAGGCGGCGGTGTGGTTGTGATCAAGGCTAAAGG
ACTTCCTGGGTGCTTCTGGTGGACCAGTTCGGCAACTTGCATGCGCCATT
CGCCCAAGCCCGGACGTTTCTTTCTGAGCATGGGTTCGGAGAGACGAAAG
TCGCCATCCATGAACCAGGCGGCGGTGTGGTTGTGATCAAGGCTAAAGAA
CTGGTCCCAGGGGTGACGACAGCGAGATGAAACTGGTCCCAGGGGTGACG
ACAGCGAGATGA