mRNA_E-fasciculatus_F_contig11913.1502.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: D8LHL5_ECTSI (Histidine kinase receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL5_ECTSI) HSP 1 Score: 384 bits (986), Expect = 8.790e-129 Identity = 196/224 (87.50%), Postives = 201/224 (89.73%), Query Frame = 1
Query: 1 VCTRLVNENVEARCEAQASVPPSLLTDVEWVWQILMNLVTNAAKYTHRGRIDVIVAYRHDCLELRVEDTGIGIDDSKKGAVFGKYVTHQTYGHASHGIGLYSVKTKVDALGGSCRVFDNPGGGTIFEVNTSTNVH--IDT----ASGRSVSLREESGNTPRRTCLIVDDTASIRKMMRHFLKKHDVDLACNGVEGLESLKNKEYDIVLMDISMPVMDGRQCLAR 654
VC+RLVNENV+ARCEAQA VPPSLLTDVEWVWQILMNLVTNAAKYTHRGRIDVIV YR DCLELRVEDTGIGIDDSKKGAVFGKYVTHQTYGHASHGIGLYSVKTKVDALGGSCRV DNPGGGT+FEV V IDT SGRSVSLRE SG+TPR TCLIVDDTASIRKMM HFLKKHDVDLACNG EGLE LK KEYDIVLMDISMPVMDGR+CLAR
Sbjct: 307 VCSRLVNENVDARCEAQACVPPSLLTDVEWVWQILMNLVTNAAKYTHRGRIDVIVGYRDDCLELRVEDTGIGIDDSKKGAVFGKYVTHQTYGHASHGIGLYSVKTKVDALGGSCRVLDNPGGGTVFEVLIPAKVDKDIDTDSTSGSGRSVSLRE-SGDTPRGTCLIVDDTASIRKMMHHFLKKHDVDLACNGEEGLERLKKKEYDIVLMDISMPVMDGRKCLAR 529
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: A0A6H5K5F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F2_9PHAE) HSP 1 Score: 366 bits (939), Expect = 3.710e-124 Identity = 191/229 (83.41%), Postives = 199/229 (86.90%), Query Frame = 1
Query: 1 VCTRLVNENVEARCEAQASVPPSLLTD-----VEWVWQILMNLVTNAAKYTHRGRIDVIVAYRHDCLELRVEDTGIGIDDSKKGAVFGKYVTHQTYGHASHGIGLYSVKTKVDALGGSCRVFDNPGGGTIFEV----NTSTNVHIDT--ASGRSVSLREESGNTPRRTCLIVDDTASIRKMMRHFLKKHDVDLACNGVEGLESLKNKEYDIVLMDISMPVMDGRQCLAR 654
VC RLVNENVEARC+AQA VP SLLTD VEWVWQILMNLVTNAAKYTHRGRI+VIV YR L LRVEDTGIGIDDSKKGAVFG YVTHQTYGHASHGIGLYSVKTKVDALGGSCRVFDNPGGGTIFEV ++ ID+ SGRSVSLRE SG+T R TCLIVDDTASIRKMMRHFLK+HDVDLACNGVEGLE LKNKEYDIVLMDISMPVMDGR+CLAR
Sbjct: 106 VCNRLVNENVEARCQAQACVPASLLTDGLLTDVEWVWQILMNLVTNAAKYTHRGRINVIVGYRDGRLSLRVEDTGIGIDDSKKGAVFGMYVTHQTYGHASHGIGLYSVKTKVDALGGSCRVFDNPGGGTIFEVLIPAKVDKDIDIDSPSGSGRSVSLRE-SGDTTRGTCLIVDDTASIRKMMRHFLKQHDVDLACNGVEGLERLKNKEYDIVLMDISMPVMDGRECLAR 333
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: A0A6H5JFN7_9PHAE (Response regulatory domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN7_9PHAE) HSP 1 Score: 182 bits (463), Expect = 3.610e-55 Identity = 96/118 (81.36%), Postives = 102/118 (86.44%), Query Frame = 1
Query: 319 VDALGGSCRVFDNPGGGTIFEV----NTSTNVHIDT--ASGRSVSLREESGNTPRRTCLIVDDTASIRKMMRHFLKKHDVDLACNGVEGLESLKNKEYDIVLMDISMPVMDGRQCLAR 654
VDALGGSCRVFDNPGGGTIFEV ++ ID+ SGRSVSLRE SG+T R TCLIVDDTASIRKMMRHFLK+HDVDLACNGVEGLE LKNKEYDIVLMDISMPVMDGR+CLAR
Sbjct: 2 VDALGGSCRVFDNPGGGTIFEVLIPAKVDKDIDIDSPSGSGRSVSLRE-SGDTTRGTCLIVDDTASIRKMMRHFLKQHDVDLACNGVEGLERLKNKEYDIVLMDISMPVMDGRECLAR 118
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: Q8QKV4_ESV1K (EsV-1-112 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKV4_ESV1K) HSP 1 Score: 187 bits (474), Expect = 1.800e-52 Identity = 105/222 (47.30%), Postives = 138/222 (62.16%), Query Frame = 1
Query: 1 VCTRLVNENVEARCEAQASVPPSLLTDVEWVWQILMNLVTNAAKYTHRGRIDV---IVAYRHDCLELRVEDTGIGIDDSKKGAVFGKYVTHQ-TYGHASHGIGLYSVKTKVDALGGSCRVFDNPGGGTIFEVNTSTNVHIDTASGRSVSLREESGNTPRRTCLIVDDTASIRKMMRHFLKKHDVDLACNGVEGLESLKNKEYDIVLMDISMPVMDGRQCLAR 654
VC R+ E V +RC +P +LTD EW++QILM L TNAA+YTH G IDV +V H L + V DTG+GI DS+K VF K T+ T GH S G+GL SVK KV ALGG + DN GGGT+ V + D +G S + R+ L+VDDT S+RK+M FLK H V++A +G +GL+ +K+K YD+V +D+ MPVMDG QCL +
Sbjct: 314 VCIRV--EAVNSRCIVGDGIPAFVLTDGEWLFQILMTLATNAARYTHSGSIDVDINLVQSTH--LLIVVRDTGVGIPDSEKRDVFDKDFTNDATNGHGSTGLGLNSVKRKVSALGGLYTITDNDGGGTVLSVQIPVKLSADCYAGNVESNTDNVNACRVRSILVVDDTPSVRKLMWRFLKDHMVEVAVDGADGLQKMKDKRYDVVFLDMMMPVMDGTQCLVQ 531
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: A0A836CIQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIQ4_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.820e-29 Identity = 74/205 (36.10%), Postives = 116/205 (56.59%), Query Frame = 1
Query: 70 LLTDVEWVWQILMNLVTNAAKYTHRGRIDVIV---AYRHDCLELRVEDTGIGIDDSKKGAVFGKYVTHQTYGHASHGIGLYSVKTKVDALGGSCRVFDNPGG--GTIFEVNT----STNVHID-TASGRSVSLREESGNTPRRTCLIVDDTASIRKMMRHFLKKHDVDLACNGVEGLESLKNKEYDIVLMDISMPVMDGRQCLAR 654
+LTD EW+WQI NL+ NA ++T RG I + + RH +E+R DTGIGI + +F ++ T Q S G+GLY VK+K + LGG+ V+ N G++F V + + H++ + L + N+ + LI++DT+S+R++M+ L + V A NG E LE ++ Y +V D+ MPVMDG QC+ +
Sbjct: 446 MLTDPEWLWQICFNLLMNAKRFTLRGSIRFTMRATSTRHLVVEVR--DTGIGIPVEDREIIFERFRTLQNRKQESTGLGLYIVKSKTELLGGTVSVYSNNDSECGSVFVVTIPLVLADDDHVEHVPEEQEEPLLQGVANSSAASVLIIEDTSSVRRLMKRILTRFQVHEAVNGAEALEMMQKHLYTVVFCDVFMPVMDGIQCVRQ 648
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: A0A835Z0U1_9STRA (Histidine kinase-like ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U1_9STRA) HSP 1 Score: 122 bits (305), Expect = 3.720e-29 Identity = 72/202 (35.64%), Postives = 112/202 (55.45%), Query Frame = 1
Query: 70 LLTDVEWVWQILMNLVTNAAKYTHRGRIDVIV---AYRHDCLELRVEDTGIGIDDSKKGAVFGKYVTHQTYGHASHGIGLYSVKTKVDALGGSCRVFDNPGG--GTIFEVNTSTNVHIDTASGRSVS--LREESGNTPRRTCLIVDDTASIRKMMRHFLKKHDVDLACNGVEGLESLKNKEYDIVLMDISMPVMDGRQCLAR 654
+LTD EW+WQI NL+ NA ++T RG I + + RH +E+R DTGIGI + +F ++ T Q S G+GLY VK+K + LGG+ V+ N G++F V + D L + ++ + LI++DT+S+R++M+ L + V A NG E L+ ++ Y +V D+ MPVMDG QC+ +
Sbjct: 159 MLTDPEWLWQICFNLLMNAKRFTLRGSIRFTMRATSTRHLVVEVR--DTGIGIPVEDREIIFERFRTLQNRKQESTGLGLYIVKSKTELLGGTVAVYSNNDSECGSVFVVTLPLELAEDEPGPEEQEEPLLQRVVDSSAASVLIIEDTSSVRRLMKRILTRFHVHEAVNGAEALQMMQKHMYTVVFCDVFMPVMDGIQCVRQ 358
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: A0A1I0NLJ1_9FLAO (Signal transduction histidine kinase n=2 Tax=Chryseobacterium wanjuense TaxID=356305 RepID=A0A1I0NLJ1_9FLAO) HSP 1 Score: 121 bits (304), Expect = 3.480e-28 Identity = 77/207 (37.20%), Postives = 112/207 (54.11%), Query Frame = 1
Query: 55 SVPPSLLTDVEWVWQILMNLVTNAAKYTHRGRIDVIV-----AYRHDCLELRVEDTGIGIDDSKKGAVFGKYVTHQ---TYGHASHGIGLYSVKTKVDALGGSCRVFDNPGGGTIFEVNTSTNV---HIDTASGRSVSLREESGNTPRRTCLIVDDTASIRKMMRHFLKKHDV--DLACNGVEGLESLKNKEYDIVLMDISMPVMDG 636
S+P +L D + QIL+NL+ NA K+TH G+ID+ V ++ L ++ DTGIGID K G VF ++ + T G+GL VK V GS V PG GT F+ + + T + + ++ NTP R L+VDD A + +M+H L + ++ D+ NG+E +E L N+ YD+VLMDI MP MDG
Sbjct: 336 SIPDTLTGDATRLTQILVNLIGNAIKFTHHGKIDIEVYNKSQTEKNIVLGFKISDTGIGIDKEKLGEVFERFNQGEDSITRNFGGTGLGLSIVKNLVILQDGSIEVSSEPGKGTTFDFYIPYGISEEQLTTITTANTDYFKDKTNTPLRV-LVVDDNAINQSLMKHLLLQWNINFDIVSNGLEAVEQLVNQTYDLVLMDIQMPKMDG 541
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: UPI001F0A91A7 (ATP-binding protein n=1 Tax=Salinivibrio socompensis TaxID=1510206 RepID=UPI001F0A91A7) HSP 1 Score: 113 bits (282), Expect = 8.250e-27 Identity = 77/214 (35.98%), Postives = 107/214 (50.00%), Query Frame = 1
Query: 10 RLVNENVEARCEAQASVPPSLLTDVEWVWQILMNLVTNAAKYTHRGRIDVIVAYRHDCLELRVEDTGIGIDDSKKGAVFGKYVTHQ---TYGHASHGIGLYSVKTKVDALGGSCRVFDNPGGGTIFEVNTSTNVHIDTASGRSVSLREESGNTPRRTCLIVDDTASIRKMMRHFLKK--HDVDLACNGVEGLESLKNKEYDIVLMDISMPVMDG 636
R + + SVP +L D QIL+NLV NA K+T +G + V + D L L V+DTGIGID+S G +F + T G+GL K V+ +GG V P GT F V A +L +G+ L+ +D+ + + ++R L+K H V LA NG E LE +K ++DIVLMD+SMPVMDG
Sbjct: 49 RADKKRIHLSASVSPSVPDTLYMDENRFTQILLNLVANALKFTDQGGVTVSLNTDGDVLVLWVKDTGIGIDESHIGRIFDPFTQADGSITRRFGGTGLGLSICKKLVEMMGGHIEVDSEPHHGTDFCVRLPIVATPQDAEKHQPTLPIPAGSVQPMVILVAEDSRANQMVVRLMLEKQGHIVVLASNGKEALEHVKQTDFDIVLMDMSMPVMDG 262
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: A0A1S7LDX2_MAGMO (Histidine kinase n=1 Tax=Magnetococcus massalia (strain MO-1) TaxID=451514 RepID=A0A1S7LDX2_MAGMO) HSP 1 Score: 117 bits (292), Expect = 1.310e-26 Identity = 69/203 (33.99%), Postives = 113/203 (55.67%), Query Frame = 1
Query: 43 EAQASVPPSLLTDVEWVWQILMNLVTNAAKYTHRGRIDVIVAYRHDCLELRVEDTGIGIDDSKKGAVFGKYV---THQTYGHASHGIGLYSVKTKVDALGGSCRVFDNPGGGTIFEVNTSTNVHIDTASGRSVSLREESGNTPRRTCLIVDDTASIRKMMRHFLKK--HDVDLACNGVEGLESLKNKEYDIVLMDISMPVMDG 636
+ Q ++P ++ D V Q+L+NL++NA K+T GRI + + + L VED+GIGIDD++ A+F K+ + T G+GL + V+ +GG V N G F + R +S ++ TP L+V+D+ R +++ FLK+ H + LACNG EG+ES++++ + ++LMD+ MPVMDG
Sbjct: 397 DQQETLPVQVVGDAGRVRQVLLNLISNAIKFTDAGRIAISAHMQSEQLLFEVEDSGIGIDDTQIHAIFEKFTQVDSGMTRRFGGSGLGLTISRQLVELMGGQIGVKRNTTIGCTFYFSIPYQQASQQKQNRPLSPPKDDATTPPCKILLVEDSEDNRLLIQSFLKRTNHQLVLACNGQEGVESVQSESFQLILMDMQMPVMDG 599
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Match: A0A2G4JQG3_9CAUL (Histidine kinase n=2 Tax=Caulobacter sp. B11 TaxID=2048899 RepID=A0A2G4JQG3_9CAUL) HSP 1 Score: 116 bits (291), Expect = 1.980e-26 Identity = 71/215 (33.02%), Postives = 118/215 (54.88%), Query Frame = 1
Query: 43 EAQASVPPSLLTDVEWVWQILMNLVTNAAKYTHRGRIDVIVAYRHDC--LELRVEDTGIGIDDSKKGAVFGKYV---THQTYGHASHGIGLYSVKTKVDALGGSCRVFDNPGGGTIFEVNTSTNVHIDTASGRSV----SLREESGNTPRRTCLIVDDTASIRKMMRHFLKKHDVDL--ACNGVEGLESLKNKEYDIVLMDISMPVMDGRQCLAR 654
+A +P +L D + + QIL+NLV NA K+T GR+ + + Y D L++RVEDTG G+D++++ +F ++ T H G+GL + V+A+GG+ V PG G++F HI S S ++ + S + L+ DD A+IR++ R L++ D ++ A NGVE + +D++L+D++MPV+DG L R
Sbjct: 496 DASPDIPDQVLVDPDRLRQILVNLVGNAVKFTDEGRVRLSLGYDADAQALQVRVEDTGAGMDEAQRARLFQRFSQVDASSTRQHGGTGLGLAISRALVEAMGGAIGVDSAPGQGSVFYF------HIAAPSADSSRPLDAVSDPSASLACARVLVADDNAAIRELARALLEQFDAEVTEAVNGVEAVALAAGAPFDVILVDLNMPVLDGHVALHR 704 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11913.1502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11913.1502.1 >prot_E-fasciculatus_F_contig11913.1502.1 ID=prot_E-fasciculatus_F_contig11913.1502.1|Name=mRNA_E-fasciculatus_F_contig11913.1502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=219bp VCTRLVNENVEARCEAQASVPPSLLTDVEWVWQILMNLVTNAAKYTHRGRback to top mRNA from alignment at E-fasciculatus_F_contig11913:48..1393+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11913.1502.1 ID=mRNA_E-fasciculatus_F_contig11913.1502.1|Name=mRNA_E-fasciculatus_F_contig11913.1502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1346bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11913:48..1393+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11913:48..1393+ >mRNA_E-fasciculatus_F_contig11913.1502.1 ID=mRNA_E-fasciculatus_F_contig11913.1502.1|Name=mRNA_E-fasciculatus_F_contig11913.1502.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1314bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11913:48..1393+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |