mRNA_E-fasciculatus_F_contig11901.1493.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: D7FX87_ECTSI (3-ketoacyl-CoA thiolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX87_ECTSI) HSP 1 Score: 175 bits (443), Expect = 7.090e-51 Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 3
Query: 144 FKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATYCIK 425
FKKGGTTTAGNASQVSDGAAATLLMTRESAA+RGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGD+DLFELNEAFASQATYCIK
Sbjct: 225 FKKGGTTTAGNASQVSDGAAATLLMTRESAAQRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDVDLFELNEAFASQATYCIK 318
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: A0A7J7PS41_9CHLO (Thiolase, N-terminal domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PS41_9CHLO) HSP 1 Score: 156 bits (395), Expect = 4.910e-43 Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = 3
Query: 84 SDEGVRAGTTTAKLGGLKAVFKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATYCI 422
+D+G+RAG T A L GL+ VFKK GTTTAGN+SQV+DGAAA L+MTR A +RGL LG+FRS+A VGV P +MG+GPAVAIPAAV KAGL L D+D++E+NEAFASQATYC+
Sbjct: 294 ADDGIRAGATAASLSGLRTVFKKDGTTTAGNSSQVTDGAAAVLMMTRREALKRGLPVLGIFRSFAAVGVDPAIMGVGPAVAIPAAVDKAGLSLDDVDVYEINEAFASQATYCV 406
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: A0A2P6TZV7_CHLSO (3-ketoacyl-thiolase peroxisomal n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TZV7_CHLSO) HSP 1 Score: 155 bits (393), Expect = 9.150e-43 Identity = 82/113 (72.57%), Postives = 96/113 (84.96%), Query Frame = 3
Query: 84 SDEGVRAGTTTAKLGGLKAVFKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATYCI 422
+D+G+R GTT A L LK VFKKGG+TTAGN+SQV+DGAAA +LMTR+ AA+RGL LG+FRS+A VGVPP VMGIGPAVAIPAAV AGL L DID+FE+NEAFASQATY +
Sbjct: 259 ADDGIRLGTTPASLSQLKPVFKKGGSTTAGNSSQVTDGAAAVMLMTRQEAAKRGLPILGIFRSFAAVGVPPAVMGIGPAVAIPAAVEMAGLTLDDIDVFEINEAFASQATYSV 371
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: A0A383VSG4_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VSG4_TETOB) HSP 1 Score: 154 bits (389), Expect = 2.490e-42 Identity = 78/113 (69.03%), Postives = 94/113 (83.19%), Query Frame = 3
Query: 84 SDEGVRAGTTTAKLGGLKAVFKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATYCI 422
+D+G+R G T A L GL+ VFKK GTTTAGN+SQV+DGAAA LLMTR A +RGL LG+FRS+A VGV P +MG+GPAVAIPAAV KAGL L D+D++E+NEAFASQATYC+
Sbjct: 240 ADDGIRPGATAASLAGLRTVFKKDGTTTAGNSSQVTDGAAAVLLMTRREALKRGLPLLGIFRSFAAVGVDPAIMGVGPAVAIPAAVEKAGLSLEDVDVYEINEAFASQATYCV 352
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: A0A485L9Q1_9STRA (Aste57867_18293 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9Q1_9STRA) HSP 1 Score: 152 bits (383), Expect = 9.320e-42 Identity = 81/112 (72.32%), Postives = 93/112 (83.04%), Query Frame = 3
Query: 84 SDEGVRAGTTTAKLGGLKAVFKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATYC 419
+DEG+R GTT LG LKA FKKGG+TTAGN+SQVSDGAAA L+MTR +A + GL LG F SYAV GVPPE+MG+GPAVAIPAA+ KAGL + DID+FELNEAFASQA YC
Sbjct: 228 ADEGIRVGTTVDGLGKLKASFKKGGSTTAGNSSQVSDGAAACLVMTRAAAEKLGLPILGTFVSYAVAGVPPEIMGVGPAVAIPAALKKAGLTIDDIDVFELNEAFASQALYC 339
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: A0A2P6VRC7_9CHLO (3-ketoacyl-thiolase peroxisomal n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRC7_9CHLO) HSP 1 Score: 153 bits (386), Expect = 9.360e-42 Identity = 81/110 (73.64%), Postives = 92/110 (83.64%), Query Frame = 3
Query: 87 DEGVRAGTTTAKLGGLKAVFKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATY 416
D+G+R GTT A LG L+ VFKKGGTTTAGN+SQV+DGAAA +LMTR A RRGL LG+FRS+A VGVPP VMGIGPAVAIPAAV AGL + DID+FE+NEAFASQA Y
Sbjct: 258 DDGIRPGTTAASLGQLRPVFKKGGTTTAGNSSQVTDGAAAAMLMTRAEADRRGLLILGIFRSFAAVGVPPAVMGIGPAVAIPAAVEMAGLSIDDIDVFEINEAFASQAVY 367
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: A0A8J1UK34_OWEFU (Ofus.G141117 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UK34_OWEFU) HSP 1 Score: 151 bits (382), Expect = 2.990e-41 Identity = 82/112 (73.21%), Postives = 92/112 (82.14%), Query Frame = 3
Query: 87 DEGVRAGTTTAKLGGLKAVFKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATYCI 422
D+GVR TT A L LK VFKKGG+TTAGNASQVSDGAAA LL TR +A R+ L LGV RSYAVVGVPP+VMGIGPA AIP A+ KAGL + D+D+FE+NEAFASQATYCI
Sbjct: 270 DDGVRPNTTLAGLAKLKPVFKKGGSTTAGNASQVSDGAAAVLLATRSAARRQNLPVLGVLRSYAVVGVPPDVMGIGPAFAIPHALNKAGLTVEDVDIFEINEAFASQATYCI 381
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: A0A061S4X0_9CHLO (Acetyl-CoA acyltransferase 1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S4X0_9CHLO) HSP 1 Score: 150 bits (378), Expect = 7.840e-41 Identity = 82/111 (73.87%), Postives = 88/111 (79.28%), Query Frame = 3
Query: 87 DEGVRAGTTTAKLGGLKAVFKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATYC 419
D+G+RA T L L AVFKKGG+TT GNASQVSDGAAA +LMTR A RRGL LGVFRSYA VGVPPE+MGIGPA AIP AV AGL + DIDLFELNEAFASQA YC
Sbjct: 252 DDGIRADVTPQGLAKLPAVFKKGGSTTPGNASQVSDGAAAAVLMTRAEARRRGLPVLGVFRSYAAVGVPPEIMGIGPAKAIPEAVRMAGLSISDIDLFELNEAFASQALYC 362
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: A0A7K9F6E1_STEPR (THIKA thiolase (Fragment) n=18 Tax=Aves TaxID=8782 RepID=A0A7K9F6E1_STEPR) HSP 1 Score: 145 bits (367), Expect = 1.110e-40 Identity = 79/113 (69.91%), Postives = 89/113 (78.76%), Query Frame = 3
Query: 87 DEGVRAGTTTAKLGGLKAVFKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATYCIK 425
DEG+R TT LG LK FK+ G+TTAGNASQVSDGAAA LL R AA+ GL LGV RS+AVVGVPP+VMGIGPA AIP AV KAGL L DID+FE+NEAFASQA YC++
Sbjct: 93 DEGIRPSTTLEGLGKLKPAFKEDGSTTAGNASQVSDGAAAVLLAKRSKAAQLGLPVLGVLRSFAVVGVPPDVMGIGPAYAIPVAVEKAGLTLNDIDIFEINEAFASQAVYCVE 205
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Match: A0A7L3HSR5_9PASS (THIKA thiolase (Fragment) n=1 Tax=Buphagus erythrorhynchus TaxID=245048 RepID=A0A7L3HSR5_9PASS) HSP 1 Score: 143 bits (360), Expect = 1.370e-40 Identity = 77/121 (63.64%), Postives = 90/121 (74.38%), Query Frame = 3
Query: 63 RRGDFARSDEGVRAGTTTAKLGGLKAVFKKGGTTTAGNASQVSDGAAATLLMTRESAARRGLRPLGVFRSYAVVGVPPEVMGIGPAVAIPAAVGKAGLELGDIDLFELNEAFASQATYCIK 425
++ DEG+R TT L LK FK+ G+TTAGNASQVSDGAAA LL R AA+ GL LGV RS+AVVGVPP+VMGIGPA AIP AV KAGL L DID++E+NEAFASQA YC++
Sbjct: 28 KKATIVHEDEGIRPSTTLEGLAKLKPAFKEDGSTTAGNASQVSDGAAAVLLAKRSKAAQLGLPVLGVLRSFAVVGVPPDVMGIGPAYAIPVAVEKAGLTLNDIDIYEINEAFASQAVYCVE 148 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11901.1493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11901.1493.1 >prot_E-fasciculatus_F_contig11901.1493.1 ID=prot_E-fasciculatus_F_contig11901.1493.1|Name=mRNA_E-fasciculatus_F_contig11901.1493.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=123bp MPSRRRVTPGLTGRRRRASSTRRFCPFGRGGAGGHHHGQAGRPKGGLQEGback to top mRNA from alignment at E-fasciculatus_F_contig11901:38..3777- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11901.1493.1 ID=mRNA_E-fasciculatus_F_contig11901.1493.1|Name=mRNA_E-fasciculatus_F_contig11901.1493.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3740bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11901:38..3777- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11901:38..3777- >mRNA_E-fasciculatus_F_contig11901.1493.1 ID=mRNA_E-fasciculatus_F_contig11901.1493.1|Name=mRNA_E-fasciculatus_F_contig11901.1493.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=738bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11901:38..3777- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |