mRNA_E-fasciculatus_F_contig119.1485.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig119.1485.1 vs. uniprot
Match: D8LCW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW4_ECTSI) HSP 1 Score: 521 bits (1342), Expect = 1.530e-171 Identity = 321/404 (79.46%), Postives = 332/404 (82.18%), Query Frame = 1
Query: 4 LEESADVLRRRVELLEEEASAKPVVDHEAFAALGEEMKAATAVGARLREQVGRLEEALSSARKEVAEASAASERARAGRDEAEAXXXXLDAAKLETAREVEQLKAFAIRANLEREECLERERAVARQRVDQALDEPAVIGGGNTGPDLLYIPPPAVATPTTCGRRLDAGGLTRGSGDGREGGAVSAREGSTSPPLSARRQRRSSDEDHVELWDRRAHADQHQXXXXXXXXXXXXXXXXXXQRLVQSQEELRSCRKEEERSRARCSQLETRLAETRDCLEEQKGVTASMRRAAARAHDDAEAARKQVEDTKARMSRQEFECRRQVSLLEARLLETGVRNSRRRDLLQLQACAQEDLVKALREPVLPSTCGDTVVSDVSDHSLRAEDVERPAAAAAS-DDEWQSSR 1212
LEESADVLRRRVE LE EASAKP VD EAFAALGEEMKAATAVGARLREQVGRLEEALS+AR+EVAEASAASERA AGRDEAEA NLER+ECLERERAVARQRVDQ L+E AVIGGG T DLL+ PPPAVATPTT GRRLDA G GSG GREG SAR+GS SPPLSARRQRRS DEDHVE WD RAHAD+ Q XXXXX QRLVQSQEELR CRKEEERSRARCSQLETRLAE RDCLEEQK VTASMRRAAARAHDDAEAARKQVEDTKA +SRQEF+CRRQVSLLEARLLETG RNSRRRDLLQLQACAQEDLVKALR+PVLPSTCGDTVVSDVSDHSLRAE+VERPAAAAAS DEWQ SR
Sbjct: 841 LEESADVLRRRVESLEAEASAKPAVDLEAFAALGEEMKAATAVGARLREQVGRLEEALSAARREVAEASAASERATAGRDEAEARIVRXXXXXXXXXXXXXXXXXXXXXXNLERDECLERERAVARQRVDQTLNETAVIGGGTTDQDLLHTPPPAVATPTTRGRRLDARGPPLGSGGGREGAPASARDGSVSPPLSARRQRRSLDEDHVEQWDHRAHADEQQRQHQXXXXXMR-------QRLVQSQEELRCCRKEEERSRARCSQLETRLAEARDCLEEQKSVTASMRRAAARAHDDAEAARKQVEDTKALVSRQEFQCRRQVSLLEARLLETGARNSRRRDLLQLQACAQEDLVKALRDPVLPSTCGDTVVSDVSDHSLRAEEVERPAAAAASASDEWQISR 1237
BLAST of mRNA_E-fasciculatus_F_contig119.1485.1 vs. uniprot
Match: A0A6H5KJW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW4_9PHAE) HSP 1 Score: 272 bits (695), Expect = 1.350e-87 Identity = 152/164 (92.68%), Postives = 157/164 (95.73%), Query Frame = 1
Query: 724 QRLVQSQEELRSCRKEEERSRARCSQLETRLAETRDCLEEQKGVTASMRRAAARAHDDAEAARKQVEDTKARMSRQEFECRRQVSLLEARLLETGVRNSRRRDLLQLQACAQEDLVKALREPVLPSTCGDTVVSDVSDHSLRAEDVERPAAAAAS-DDEWQSSR 1212
QRLVQSQ+ELR CRKEEERSRARCSQLETRLAE RDCLEEQK VT+SMRRAAARAH+DAEAARKQVEDTKA MSRQEFECRRQVSLLEARLLE GVRNSRRRDLLQLQACAQEDLVKALREPVLPSTCGDTVVSDVSDHSLRAE+VERPAAAAAS DEW+SSR
Sbjct: 10 QRLVQSQQELRCCRKEEERSRARCSQLETRLAEARDCLEEQKSVTSSMRRAAARAHEDAEAARKQVEDTKALMSRQEFECRRQVSLLEARLLEAGVRNSRRRDLLQLQACAQEDLVKALREPVLPSTCGDTVVSDVSDHSLRAEEVERPAAAAASASDEWRSSR 173 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig119.1485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig119.1485.1 >prot_E-fasciculatus_F_contig119.1485.1 ID=prot_E-fasciculatus_F_contig119.1485.1|Name=mRNA_E-fasciculatus_F_contig119.1485.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=405bp QLEESADVLRRRVELLEEEASAKPVVDHEAFAALGEEMKAATAVGARLREback to top mRNA from alignment at E-fasciculatus_F_contig119:88..5520+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig119.1485.1 ID=mRNA_E-fasciculatus_F_contig119.1485.1|Name=mRNA_E-fasciculatus_F_contig119.1485.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5433bp|location=Sequence derived from alignment at E-fasciculatus_F_contig119:88..5520+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig119:88..5520+ >mRNA_E-fasciculatus_F_contig119.1485.1 ID=mRNA_E-fasciculatus_F_contig119.1485.1|Name=mRNA_E-fasciculatus_F_contig119.1485.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2430bp|location=Sequence derived from alignment at E-fasciculatus_F_contig119:88..5520+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |