mRNA_E-fasciculatus_F_contig1188.1470.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1188.1470.1 vs. uniprot
Match: D7FGV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV0_ECTSI) HSP 1 Score: 1319 bits (3413), Expect = 0.000e+0 Identity = 804/1046 (76.86%), Postives = 867/1046 (82.89%), Query Frame = 1
Query: 1183 VASARLRSDIRQ-------SADEMREALALRDESRRLRTARAEXXXXXXXXQQKIARYREERIRELESRLARQSGGRPPGAHPTPLAESSVAPGNAQVTEQGVSVDTRTANKLQQLSRQRREIEAAIAAALEENPNLEDKSPRSDRLRGDGAESLAVGNDRPKSGRRKRTQVREEDPXXXXXXXXXXXXXXXXXXXXXXSRTQEDSYVLGQDYDYQEQHGSPAVPLGKPPLAPSRAGGERRRQHSDARRRPSVSEVDERLDGSEGGGIPESYQRDGGNGRDSDVDEVQTEDGNGDDSVWSNNRLSDVGGSVWEESAPSRGWDGDDGRGEVPPLALMKTEEIRARGDVNRPRRQRHWVRSGGHEHVEPSTANKTRDEERDIGRNRGGSLEQRPGPRTDHGEVVGHLGASEPLDDHGSYNSRWSLSDEDETPERSGGESGASTRQAYAGDAGGSDDRAREQSGSSHRDSQEHGWDED-EVASNRKEGGGNVAGMVPEYLDDFFESP-EGQDRGDDVPYAVSEPSDEENSAFAAGEELPSAGKPVSTQSLIVDQDESQPAGVDDDTDQVLLQPVSPPVLRHSTQAAAIATAKTEGISLERAVEVQISPAGKPAAAELDGGPSKDDLALSHSTENEAATTVDDARDNGRTSAEEGESEGGDVAAPMRIDSAVLFASLSSSTAGASLSSKSMARAEGKWGSRTGTAAAALGARQGEASASTFALSTTDDDGDSGANPEKQGDVSRGRSSASLSGSQTTR----PPDDDTSDKRVGGGRVAADAYK---GSEPRASAPPLATSTRSESGSVVTFSPEVDRRSGSPAALSERQSSPPISDEPNGGVPRSNNSSGSAPAPSPLPSTTPSESEATKPVVGERPVPLLGKEEGQPSPEGPHHATLEPEQEENILSTPQSSSSPRGEQAPADSSEISSTVGGDPTVQVAVLDSSSNAPSQRTQTEGVAGDLDNEPSINEPEGDKASYLDGQASPDEHERGFVRNDHEGDESARDQEGGRLGTLEGRSLLAENSSHSGSALDVGGGGVDGDDDDDGYF 4272
VA +D+RQ SADEMREALALRDESRRLRTARAE XXX QQKIARYRE+RIRELESRLAR SG R P A PTP AE+ APG+AQVTEQG+SVD ANKLQQLSRQRREIEAAIAAALEE+P LEDKSPRSDR RGDGAESLAV ++RPKSGRRKR Q+RE XXXXXXXXXXXXXXXXXXXX SRTQED YV GQD DYQEQ PA+PLGKPPLAP RAGGERRR+HS+ RR+ SVSEVDERLD SEGGGIPES+ RDG N RDSDVDEVQTEDGNG+DS WSNNRLSD GGSVWEE+ SRGWD DDGRGEVPPLAL++TEE+RARGD N+PRRQRHWVRSGGHEHVE S AN+ R EERDIG +RGGSLEQR PRTDHGEVVGH GASEPLDD GSYNSRWSLSDEDE ERSGGE GASTRQAYAGDA GSDDRARE S SSHR++Q+H WDED VASN KEGGGNVAGMVPEYLDDFFE EG DRGDDVP+AVSEPSDEEN AFAAGEELPS K VS QS +VDQ+ES PAGVD+D DQVLLQPVSPPVLRHS QAAA+ AK EG SLER+VEVQ+SP G+P L GG SK++++ SH EN TTV +ARD+GRT AEE +SE GDVA PM+IDSAVLFASLSSSTAG SLSSKSMARAEGKWGSRTGT+AAAL A+QGE SASTFALSTTDDDGD+G N E +GD+SRGRSSA LS Q T PP DT + VG GRVA DA K GSEPRASAPP ATSTRSESG VVT SPE DRRS SP AL ERQS PP SD+ GG+P + NSS S PAPSPL TTPSE EAT+PVVG+ PVPLL KEEGQPS EG HHATLEPEQE+ ILST + S+SPRGEQA ADSS+ISS VGGDPTVQ AVLD+S +APSQRT+ EGVAGDLDNEPSIN PE DK SYLDG+ASPDEHE G +HE D SARDQEG LGTLEG+SLLAENSSHSGSALDVGGG VDGDDDDDGYF
Sbjct: 154 VAICLREADVRQIGRERSESADEMREALALRDESRRLRTARAERAXXXRIAQQKIARYREDRIRELESRLARHSGDRQPDAPPTPRAEAPAAPGDAQVTEQGLSVDI-NANKLQQLSRQRREIEAAIAAALEEDPTLEDKSPRSDRSRGDGAESLAVEHERPKSGRRKRAQLREXX--XXXXXXXXXXXXXXXXXXXXSSRTQEDPYVFGQDVDYQEQDEPPAIPLGKPPLAPCRAGGERRRKHSNVRRQSSVSEVDERLDRSEGGGIPESFPRDGENDRDSDVDEVQTEDGNGNDSGWSNNRLSDFGGSVWEENVSSRGWDADDGRGEVPPLALVETEELRARGDENQPRRQRHWVRSGGHEHVESSMANQRRGEERDIGSHRGGSLEQRSVPRTDHGEVVGHPGASEPLDDDGSYNSRWSLSDEDEAQERSGGERGASTRQAYAGDASGSDDRAREPSRSSHREAQKHTWDEDASVASNTKEGGGNVAGMVPEYLDDFFEEKSEGHDRGDDVPFAVSEPSDEENPAFAAGEELPSDRKSVSAQSWVVDQEESHPAGVDEDPDQVLLQPVSPPVLRHSAQAAAVVAAKAEGGSLERSVEVQVSPVGEPPT-NLHGGASKEEVSPSHGPENPVVTTVGNARDDGRTIAEEDDSESGDVATPMKIDSAVLFASLSSSTAGTSLSSKSMARAEGKWGSRTGTSAAALAAKQGEVSASTFALSTTDDDGDTGVNSEGKGDISRGRSSARLSDRQQTPDNKCPPVADTGEALVGSGRVATDANKPEEGSEPRASAPPPATSTRSESGGVVTLSPEADRRSESPPALGERQSRPP-SDDSLGGLPHNYNSSSSTPAPSPLLFTTPSELEATRPVVGDHPVPLLAKEEGQPSSEGSHHATLEPEQEKAILSTLEPSASPRGEQASADSSDISSGVGGDPTVQAAVLDNSPSAPSQRTEMEGVAGDLDNEPSINGPESDKTSYLDGRASPDEHEGGLAGREHERDGSARDQEGAVLGTLEGQSLLAENSSHSGSALDVGGGAVDGDDDDDGYF 1194
BLAST of mRNA_E-fasciculatus_F_contig1188.1470.1 vs. uniprot
Match: A0A6H5KHP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP0_9PHAE) HSP 1 Score: 1301 bits (3368), Expect = 0.000e+0 Identity = 792/1028 (77.04%), Postives = 856/1028 (83.27%), Query Frame = 1
Query: 1216 QSADEMREALALRDESRRLRTARAEXXXXXXXXQQKIARYREERIRELESRLARQSGGRPPGAHPTPLAESSVAPGNAQVTEQGVSVDTRTANKLQQLSRQRREIEAAIAAALEENPNLEDKSPRSDRLRGDGAESLAVGNDRPKSGRRKRTQVREEDPXXXXXXXXXXXXXXXXXXXXXXSRTQEDSYVLGQDYDYQEQHGSPAVPLGKPPLAPSRAGGERRRQHSDARRRPSVSEVDERLDGSEGGGIPESYQRDGGNGRDSDVDEVQTEDGNGDDSVWSNNRLSDVGGSVWEESAPSRGWDGDDGRGEVPPLALMKTEEIRARGDVNRPRRQRHWVRSGGHEHVEPSTANKTRDEERDIGRNRGGSLEQRPGPRTDHGEVVGHLGASEPLDDHGSYNSRWSLSDEDETPERSGGESGASTRQAYAGDAGGSDDRAREQSGSSHRDSQEHGWDED-EVASNRKEGGGNVAGMVPEYLDDFFES-PEGQDRGDDVPYAVSEPSDEENSAFAAGEELPSAGKPVSTQSLIVDQDESQPAGVDDDTDQVLLQPVSPPVLRHSTQAAAIATAKTEGISLERAVEVQISPAGKPAAAELDGGPSKDDLALSHSTENEAATTVDDARDNGRTSAEEGESEGGDVAAPMRIDSAVLFASLSSSTAGASLSSKSMARAEGKWGSRTGTAAAALGARQGEASASTFALSTTDDDGDSGANPEKQGDVSRGRSSASLSGSQTT----RPPDDDTSDKRVGGGRVAADAY---KGSEPRASAPPLATSTRSESGSVVTFSPEVDRRSGSPAALSERQSSPPISDEPNGGVPRSNNSSGSAPAPSPLPSTTPSESEATKPVVGERPVPLLGKEEGQPSPEGPHHATLEPEQEENILSTPQSSSSPRGEQAPADSSEISSTVGGDPTVQVAVLDSSSNAPSQRTQTEGVAGDLDNEPSINEPEGDKASYLDGQASPDEHERGFVRNDHEGDESARDQEGGRLGTLEGRSLLAENSSHSGSALDVGGGGVDGDDDDDGYF 4272
+SADE+REALALRDESRRLRTARA XXXXXXXXQQKIARYREERIRELESRLAR SG RPP AHPTP AE+ VAPG+AQVTEQGVS DT ANKLQQLSRQRREIEAAIAAALEENPNLEDKSPRSDR RGDGAESLAV ++RPKSGRRKRTQ+ +E+P XXXXXXXXXXXXXXXXX S QED +VLGQD DYQEQ PA+PLGKPPLAPSRAGGERRR+HSD RR+ SVSEVDERLD SEGGGIPES+ RDGGNGRD DVDEVQTEDG+G+DS WSNNRLSD GGSVWEE+ PSRGWDGDDGRGEVP LAL++TEEIRARGDVN+PRR+RHWVRSGGHEHVEPS AN+ R EERDI +RGG LEQRP PRTDHGEVVGH GASE LDD SYNSRWSLSDEDE ERS GESGASTRQAYAG+A GSDDRA EQSGSS+R++QEH WDE VASN KEGGGNVAGMV EYLDDFFE P+G DRGDDVP+ VS PSDEEN FAAGE+LPS K VS QSL+VDQ+ESQPAGVD+D DQVLLQPVSPPVLRHS QA+AI AK EG+ ERAVEVQI P G+PAAA L GG D+++ S+ TEN TTVD ARD+ RT AEEGESE D A PMRIDSAVLFASLSSSTAGASLSSKSMARAEGKWGSR GT+AAALG +QGE SASTFA STT+D GD+G NPE++G+ SRG+ ASLS Q T RPP DT + VG GRVA DA +GS+PRA APP TST+S+S V T +PE DRRS SP A E+QS PP SDE GGVP S NSS S PAPSPL STTPSE E T+PVVG+RPVPLL KEE QPS EGPHH LEPEQE ILST + S+SPRGEQAPAD SEISSTVGGDPTVQ AVLDSS +AP Q + EGVAGDLDNEP INEPEGDK SYLD QAS DEHE V + HEGD SARDQEGG LGTL+GRSLLAENSSHSGS LDVGG VDGDDDDDGYF
Sbjct: 210 ESADEIREALALRDESRRLRTARAXXXXXXXXXQQKIARYREERIRELESRLARHSGDRPPNAHPTPRAEAPVAPGDAQVTEQGVSADT-NANKLQQLSRQRREIEAAIAAALEENPNLEDKSPRSDRSRGDGAESLAVEHERPKSGRRKRTQLADEEPYRXXXXXXXXXXXXXXXXXS--SPRQEDLHVLGQDVDYQEQDEPPAIPLGKPPLAPSRAGGERRRKHSDVRRQSSVSEVDERLDHSEGGGIPESFPRDGGNGRDRDVDEVQTEDGSGNDSGWSNNRLSDFGGSVWEENMPSRGWDGDDGRGEVPALALIETEEIRARGDVNQPRRKRHWVRSGGHEHVEPSMANQRRGEERDIRSHRGGPLEQRPVPRTDHGEVVGHPGASEALDDDRSYNSRWSLSDEDEAQERSCGESGASTRQAYAGNASGSDDRASEQSGSSYREAQEHTWDEAASVASNTKEGGGNVAGMVSEYLDDFFEKKPKGHDRGDDVPFPVSGPSDEENPPFAAGEKLPSVRKSVSAQSLVVDQEESQPAGVDEDPDQVLLQPVSPPVLRHSAQASAIVGAKIEGVPSERAVEVQIRPVGEPAAANLHGGAGNDEVSPSYGTENPVVTTVDKARDDDRTIAEEGESESSDAATPMRIDSAVLFASLSSSTAGASLSSKSMARAEGKWGSRKGTSAAALGVKQGEVSASTFAHSTTNDGGDTGLNPEEKGNNSRGQPPASLSDRQQTPDNKRPPVADTGEALVGSGRVATDANNPEEGSKPRAYAPPPTTSTKSQSSGVSTIAPEADRRSESPPAFGEQQSRPP-SDESLGGVPHSTNSSNSTPAPSPLLSTTPSEPETTRPVVGDRPVPLLAKEEVQPSSEGPHHVNLEPEQENAILSTLKPSASPRGEQAPADYSEISSTVGGDPTVQAAVLDSSYSAPGQIAEMEGVAGDLDNEPRINEPEGDKTSYLDRQASLDEHEGSIVGSGHEGDGSARDQEGGVLGTLQGRSLLAENSSHSGSGLDVGGSEVDGDDDDDGYF 1233 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1188.1470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1188.1470.1 >prot_E-fasciculatus_F_contig1188.1470.1 ID=prot_E-fasciculatus_F_contig1188.1470.1|Name=mRNA_E-fasciculatus_F_contig1188.1470.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1425bp MFNVPTCVWNPMDRESTQKQIQRFCPVPKLSARAAFLNQSQGRDVADMVDback to top mRNA from alignment at E-fasciculatus_F_contig1188:1513..9055+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1188.1470.1 ID=mRNA_E-fasciculatus_F_contig1188.1470.1|Name=mRNA_E-fasciculatus_F_contig1188.1470.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7543bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1188:1513..9055+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1188:1513..9055+ >mRNA_E-fasciculatus_F_contig1188.1470.1 ID=mRNA_E-fasciculatus_F_contig1188.1470.1|Name=mRNA_E-fasciculatus_F_contig1188.1470.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=8550bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1188:1513..9055+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |