mRNA_E-fasciculatus_F_contig11829.1432.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11829.1432.1
Unique NamemRNA_E-fasciculatus_F_contig11829.1432.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: D7FSF4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF4_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 6.230e-120
Identity = 185/190 (97.37%), Postives = 188/190 (98.95%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIERAAKRGYGKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQK 570
            GVDVLAKAKTGTGKTVAFLIPAIERAAKRG+GKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTL FDEADQLLEMGFRPAIENILRNLQ+SK +RQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQK
Sbjct:  145 GVDVLAKAKTGTGKTVAFLIPAIERAAKRGFGKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLVFDEADQLLEMGFRPAIENILRNLQASKTYRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQK 334
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: A0A6H5JHU6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHU6_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 2.460e-118
Identity = 184/192 (95.83%), Postives = 187/192 (97.40%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIERAAKRGYGKGVSALIISPTRELAQQIAVEAQQ--IMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQK 570
            GVDVLAKAKTGTGKTVAFLIPAIERAAKRG+GKGVSALIISPTRELAQQIAVEAQQ  IMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDL+ENHGLGR MRDLDTL FDEADQLLEMGFRPAIENILRNLQ+SKA RQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQK
Sbjct:   83 GVDVLAKAKTGTGKTVAFLIPAIERAAKRGFGKGVSALIISPTRELAQQIAVEAQQACIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLLENHGLGRSMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQK 274
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BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: A0A6H5L2V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V2_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.050e-70
Identity = 124/192 (64.58%), Postives = 149/192 (77.60%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIERAAK--RGYGKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQK 570
            G DVLAKAKTGTGKT++FL+PAIE  A+  R   KG+S LIISPTRELAQQIA EA Q+++FH + L+C VGG N+  D+       PDI+VATPGRL D ++N+GL +DM  L  L FDEADQLLEMGFRPAIE ILR +  S+  RQTL+FSATMPGDV+ IA +A+K  YE VDCVGEEE+THQHVPQ+
Sbjct:   82 GHDVLAKAKTGTGKTLSFLLPAIEGVARTPRAQRKGISVLIISPTRELAQQIADEANQVLTFHDMSLICVVGGTNIKADIRGFRD-RPDIVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSR-DRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQ 271
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BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: D8LUB6_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB6_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 5.680e-69
Identity = 123/192 (64.06%), Postives = 147/192 (76.56%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIERAAK--RGYGKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQK 570
            G DVLAKAKTGTGKT++FL PAIE  A+  R   KG+  LIISPTRELAQQIA EA Q+++FH + L+C VGG N+  D+       PDI+VATPGRL D ++N+GL +DM  L  L FDEADQLLEMGFRPAIE ILR +  S+  RQTL+FSATMPGDV+ IA +A+K  YE VDCVGEEE+THQHVPQ+
Sbjct:  182 GHDVLAKAKTGTGKTLSFLFPAIEGVARTPRAQRKGIWVLIISPTRELAQQIADEANQVLTFHDMSLICVVGGTNIKADIRGFRD-RPDIVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSR-DRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQ 371
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BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: A0A835ZDJ4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ4_9STRA)

HSP 1 Score: 219 bits (557), Expect = 5.070e-66
Identity = 120/191 (62.83%), Postives = 141/191 (73.82%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIERAAK--RGYGKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQ 567
            GVD+LAKAKTGTGKT+AFLIP +ERA +  R  G G+S LIISPTRELAQQI  EA     F  ++L C  GG N+  DL +L+   PDI+VATPGRL D +EN  L R +  L  L  DEADQLLEMGFRPAIE  LRNL    A RQTL+FSATMP DV+AI+ IAM+P +E+VD VGEEE+TH+HVPQ
Sbjct:   42 GVDILAKAKTGTGKTLAFLIPCVERALRSPRRAG-GISVLIISPTRELAQQIHDEAALATRFMGMRLQCIFGGTNIKADLRKLSDATPDILVATPGRLNDHLENQTLARQLAGLSALVLDEADQLLEMGFRPAIEAALRNLPPPSA-RQTLLFSATMPQDVRAISRIAMRPDFELVDTVGEEESTHEHVPQ 230
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BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: A0A7S1J8E5_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J8E5_9EUGL)

HSP 1 Score: 211 bits (538), Expect = 7.800e-63
Identity = 113/190 (59.47%), Postives = 145/190 (76.32%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIERAAKRGYGKGVSALIISPTRELAQQIAVEAQQIMSFHR-LKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQ 567
            G D+LAKAKTGTGKT+AFLIPAIE  A+   G+G+  LIISPTRELA QI  EA+Q+++FH+ ++ +   GG  + RDL+ L +  PD++VATPGRL D +E+ G+   +  L TL FDEADQLLEMGFRPAIE +LR L   K+ R+TL+FSATMP DV+AIA  A++ SY+ VDCVG E++THQHVPQ
Sbjct:   45 GGDILAKAKTGTGKTLAFLIPAIEMMAQSARGQGILTLIISPTRELASQIEEEAKQLLTFHQGIRSLVVFGGTPIKRDLSALQT-PPDLLVATPGRLNDHLEHSGIQSKITKLQTLIFDEADQLLEMGFRPAIETMLRMLPP-KSTRRTLLFSATMPADVKAIAKFALRDSYDFVDCVGAEQSTHQHVPQ 232
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BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: A0A7S3XXC6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXC6_HETAK)

HSP 1 Score: 202 bits (514), Expect = 6.530e-60
Identity = 115/196 (58.67%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIER------AAKRGYGKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENH-GLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQ 567
            G DVLAKAKTGTGKT+ FL+PAIER      AA+RG    VSAL+ISPTRELAQQIA EA+Q++ FH L L    GG  + +D++  N   PDI+VATPGRLLD +EN  G       L  L  DE DQLL+MGFRP+I  IL++L   K+ RQTL+FSATMP DVQ +A   + PSYE+VDCVG+E  THQ VPQ
Sbjct:  139 GKDVLAKAKTGTGKTLGFLLPAIERILAAPAAARRGR---VSALVISPTRELAQQIAEEAKQLLKFHDLGLQVVFGGTKMTKDVSSFNRRTPDILVATPGRLLDHLENTPGFREACAGLQCLILDECDQLLDMGFRPSIVKILQHLPP-KSGRQTLLFSATMPQDVQEMARFGLNPSYELVDCVGKEAGTHQQVPQ 330
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BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: A0A7S4D8Q7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8Q7_HETAK)

HSP 1 Score: 202 bits (514), Expect = 6.250e-59
Identity = 115/196 (58.67%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIER------AAKRGYGKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENH-GLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQ 567
            G DVLAKAKTGTGKT+ FL+PAIER      AA+RG    VSAL+ISPTRELAQQIA EA+Q++ FH L L    GG  + +D++  N   PDI+VATPGRLLD +EN  G       L  L  DE DQLL+MGFRP+I  IL++L   K+ RQTL+FSATMP DVQ +A   + PSYE+VDCVG+E  THQ VPQ
Sbjct:   59 GKDVLAKAKTGTGKTLGFLLPAIERILAAPAAARRGR---VSALVISPTRELAQQIAEEAKQLLKFHDLGLQVVFGGTKMTKDVSSFNRRTPDILVATPGRLLDHLENTPGFREACAGLQCLILDECDQLLDMGFRPSIVKILQHLPP-KSGRQTLLFSATMPQDVQEMARFGLNPSYELVDCVGKEAGTHQQVPQ 250
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: A0A8J2X069_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X069_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.240e-58
Identity = 111/197 (56.35%), Postives = 147/197 (74.62%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIERAA-KRGYGKGVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLN---SGAPDIMVATPGRLLDLMEN-HGLGRDMRD-LDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMK-PSYEVVDCVGEEENTHQHVPQK 570
            G DV+AKAKTGTGKT+AF++P+++RAA  + + +G+SAL++SPTRELA Q   E + + +FH L++ C  GG  + +D N+L      APDI+VATPGRL D +EN  G+   + D L+TL FDEADQLL+MGFRPAIE ILR ++S+K  RQTL+FSATMP DV +IA +AMK P Y  VD VGEE+ TH +VPQ+
Sbjct:  122 GGDVVAKAKTGTGKTLAFMVPSVDRAAASKPHRRGLSALVLSPTRELAAQTVEEGKLLATFHGLRVACVFGGTKIQKDYNELGLRGGRAPDILVATPGRLNDHLENTQGVAPGICDSLETLVFDEADQLLDMGFRPAIEKILRAIESTKLTRQTLLFSATMPDDVASIARLAMKSPQYHFVDTVGEEQQTHVNVPQR 318
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Match: A0A7S0I0K2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I0K2_9EUKA)

HSP 1 Score: 192 bits (487), Expect = 6.210e-58
Identity = 108/194 (55.67%), Postives = 136/194 (70.10%), Query Frame = 1 
Query:    1 GVDVLAKAKTGTGKTVAFLIPAIERA-AKRGYGK-GVSALIISPTRELAQQIAVEAQQIMSFHRLKLMCSV--GGVNVNRDLNQLN-SGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQ 567
            G+D++AKAKTGTGKT+ FL+P IER  A  G G+ G+ AL+ISPTRELA QI  E QQ+M+FH+ +L   V  GG NV  D+  L  +  P ++VATPGRL DL+ N+G+     +L TL FDEADQLLEMGFRP +  IL  LQ S A RQTL+FSATMP DV AIA  A +P+  +VD VGE++ T+  V Q
Sbjct:   72 GMDLIAKAKTGTGKTMGFLLPTIERVVAAIGAGRRGIHALVISPTRELASQIEEECQQLMTFHKPQLSARVVFGGTNVKADVRDLKGANTPSLVVATPGRLNDLLYNYGVDALCANLSTLVFDEADQLLEMGFRPDVTKILAKLQPSAATRQTLLFSATMPQDVMAIAKFATRPTVRMVDTVGEDKQTNAQVEQ 265
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11829.1432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF4_ECTSI6.230e-12097.37DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JHU6_9PHAE2.460e-11895.83Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L2V2_9PHAE1.050e-7064.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUB6_ECTSI5.680e-6964.06DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZDJ4_9STRA5.070e-6662.83P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1J8E5_9EUGL7.800e-6359.47Hypothetical protein (Fragment) n=2 Tax=Eutreptiel... [more]
A0A7S3XXC6_HETAK6.530e-6058.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D8Q7_HETAK6.250e-5958.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J2X069_9STRA2.240e-5856.35Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0I0K2_9EUKA6.210e-5855.67Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11829contigE-fasciculatus_F_contig11829:814..3747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.8
Seed ortholog evalue2.5e-98
Seed eggNOG ortholog2880.D7FSF4
Preferred nameMSS116
KEGG koko:K17679
GOsGO:0000166,GO:0000372,GO:0000373,GO:0000375,GO:0000376,GO:0000377,GO:0000959,GO:0000963,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006351,GO:0006354,GO:0006390,GO:0006392,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010501,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0033592,GO:0034337,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0090615,GO:0097159,GO:0097367,GO:0097617,GO:0097659,GO:0140053,GO:0140098,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0342@2759
EC3.6.4.13
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-04_000630.1
Exons4
Model size573
Cds size573
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11829.1432.1prot_E-fasciculatus_F_contig11829.1432.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11829 814..3747 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927694.4801054-CDS-E-fasciculatus_F_contig11829:813..9811622927694.4801054-CDS-E-fasciculatus_F_contig11829:813..981Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11829 814..981 +
1695995652.6627474-CDS-E-fasciculatus_F_contig11829:813..9811695995652.6627474-CDS-E-fasciculatus_F_contig11829:813..981Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11829 814..981 +
1622927694.4980204-CDS-E-fasciculatus_F_contig11829:1816..19321622927694.4980204-CDS-E-fasciculatus_F_contig11829:1816..1932Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11829 1817..1932 +
1695995652.6764133-CDS-E-fasciculatus_F_contig11829:1816..19321695995652.6764133-CDS-E-fasciculatus_F_contig11829:1816..1932Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11829 1817..1932 +
1622927694.5191574-CDS-E-fasciculatus_F_contig11829:2411..25561622927694.5191574-CDS-E-fasciculatus_F_contig11829:2411..2556Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11829 2412..2556 +
1695995652.6890619-CDS-E-fasciculatus_F_contig11829:2411..25561695995652.6890619-CDS-E-fasciculatus_F_contig11829:2411..2556Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11829 2412..2556 +
1622927694.5364413-CDS-E-fasciculatus_F_contig11829:3603..37471622927694.5364413-CDS-E-fasciculatus_F_contig11829:3603..3747Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11829 3604..3747 +
1695995652.7009642-CDS-E-fasciculatus_F_contig11829:3603..37471695995652.7009642-CDS-E-fasciculatus_F_contig11829:3603..3747Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11829 3604..3747 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11829.1432.1

>prot_E-fasciculatus_F_contig11829.1432.1 ID=prot_E-fasciculatus_F_contig11829.1432.1|Name=mRNA_E-fasciculatus_F_contig11829.1432.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=191bp
GVDVLAKAKTGTGKTVAFLIPAIERAAKRGYGKGVSALIISPTRELAQQI
AVEAQQIMSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLM
ENHGLGRDMRDLDTLAFDEADQLLEMGFRPAIENILRNLQSSKAHRQTLM
FSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQK*
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mRNA from alignment at E-fasciculatus_F_contig11829:814..3747+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11829.1432.1 ID=mRNA_E-fasciculatus_F_contig11829.1432.1|Name=mRNA_E-fasciculatus_F_contig11829.1432.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2934bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11829:814..3747+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGTTGACGTCCTCGCTAAGGCTAAAACGGGTACCGGAAAAACCGTTGC
GTTCTTGATTCCCGCCATCGAGCGTGCGGCGAAGAGGGGGTACGGGAAGG
GCGTGTCCGCGCTCATCATCAGCCCCACGCGCGAGCTCGCCCAGCAGATC
GCCGTCGAGGCCCAGCAGGTGTGTGCCTGTGTGTCTGTGTGCGTTTTACT
ATTTTTTTCAGAGTTTATTGGTAGTGGTAGTACCGTAATTGTGCGTGTTA
TCGCACCGGGTTGCGATTGTGTTCCTTTAGCGTATTTCTCCACAACGAGG
GGGGTACCAATGCCGAAAAGGGTAGTTTTGGAAATATCTCGTCGAGGGCT
TTCCGGAGAGGTATCGGCTGGTGCTCGCACCCTCCTAGTTGTGGAGAAAT
ACGCGAAAGAAAAAACGTTATAGTAACACGGGGTGCGATTGCACGCACAA
TTACGGTAGTAGTAGTAGCCGTCGTCGTCGTAGTAGTAGTAGTAGAAGTA
TTAGCATGGGCAGCGCTATCCGGCTGACCAGAGAAAGACACAAGGGAGAC
ATAGGAAGAGATTTTTGGCGAGATAAGAGCGACACGACGCGACGAGCCAT
CTCGCCTTTTCATTGCAGCCTGCTTGCTGCTTGTCGGCGCTATCGTTTGC
TCTCGTCTGTGGCTATGACACCATAGCCTGCCACCCTAGTCACATTTTAT
TTTCTCCCTCGGGGAGACAAGTGCTGCCCTGTCTGCCTTTGTATACCCAT
AACTTTCCCCCCCTGGTGTTTTATCCCACACGATGGTGGTGGTACTATAA
TACTGTACATACCTCCGCCGGAAAAAAATTTCACCCTGCCTGCCTCTATT
TACCCCGCCTCCTCCCCCTGCCCTTCTCCCCCTTTCCTTGGTGCGTGCTC
CTCATATTAACCCGCACGATGGTTGTGGTGATATCTCCGATGGTGGTGAT
ATCTCCGATCGTGGGTGGTATTATCTGCGATGGTGGCGGATCAATCTCCG
TAGATCATGTCCTTTCACAGGCTGAAGCTCATGTGTTCCGTTGGGGGCGT
GAACGTCAACCGGGATCTGAACCAGCTCAACTCGGGGGCCCCGGACATCA
TGGTGGCAACGCCGGGAAGGTAAAGGTGGGGTGTTGTGGGTGTTGGTGGT
GGTTTCAAACCCCGCAAAACGCGCAAGCGTGTTTTTTTACCTCGGTTGAT
TCGCTATTTAGGCTGCTTTTGGTCTGTTGGAGAACAGTATGAATTAATTC
GTAGTAATAGTATGGTGTTTTTCAACTTTGCCTGCCTCGCTATAATGGGC
TCCTTGATCTGTTGGAGAACCAATGACATCAGTGTTTTTGATCGTGCCTC
ACTCATTCGGCTCCTTAATCTGCTGGAGAACCAGTATTACTTTATGATTG
TGTTTTCGACCTTGCCAAATCCAGTAGGTTCCTTGGTCTGTTGGAGAACC
GACAATTTTGTATAGTAAGAGTGTTTTTCGATTTTGCCTCATTCCCTTGC
CTACTCCATACAATAGGCTCCTTGATCTGCTGGAGAACCAATGTAATAAA
TCGTGATTTTCGACCTCGCCTCACCACATTGCCCAATCCATTAAATAGGC
TCCTTGATCTGATGGAGAACCACGGTTTGGGGCGAGACATGAGGGACCTG
GACACCCTTGCATTCGACGAGGCTGACCAGCTCCTCGAGATGGGCTTCCG
CCCTGCCATCGAGAACATACTCAGGAATCTGCAATCCAGCAAGGTGAATA
GAGGAGGAGGAAAGAAACAAAAAAAAACGTACAGGCAAAGAAAGACGGAC
TGTTAGAGACAAACACCACAGTCGAAGGCATATAAAAAATAGAAAAGTAC
AAGCACAGACACTGGAACGTATTTATTGGAACTAAACGTTTTGGGCTACA
CTCTGTCGTTGATTTCTTTTGACTTTCGGACCCTTCGGGTCCATTTTTAT
TTGAAGACTTACCCGTTCTCAAGGGTCTCCACACTTCTGACTGTCATATA
ATAAATAGACCCAACTTTGCGTATCGTTCTCATCCAATAGTACCTTTTGA
CGGCTGTGCATCTTTTTTTCTGTGCCGTCCTCATCCAGTTGTGCCTTCTG
ACTGCTCTACTTATTTATCCTTGTCGTTTTCATCCTTATATATCCTTGTC
GTTTTCATCCTTATTTATCCTTGTTGTTTTCATACTTTTTTATCATTGTC
GTTTTCATCCTTATGTATCCTTGTCGTTTTCATACTTATTTATCCTTGTC
GTTTTCATCCTTATATATCCTTGTCGTTTTCATCCTTATTTATCCTTGTC
GTTTTCATCCTGATTTATCCTTGTCGTTTTCATACTTATACATCCTTGTC
GTTTTCATCCTTATTTATCCTTGTCGTTTTCATCATTATTTATCCTTGTC
GTTTTCATCCTTATATATCCTTGTCGTTTTCATCCTTATATATCCTTGTC
GTTTTCGTACTTATTTATCTTTGTCGTTTTCATACTGATTTATCCTTGTC
GTTTTCATCCAGTTGTGCCTTGTGACTGTTATACTTGTAGAAGACCTATT
TTATGCGCATCGTCCTCATCCAATTGTACCTTTTGACTGCTTTACGTTTC
TCTTTAGCCCGTGCCGCTCTCCACCCAACTGCGGTACCTTCTGACCTCTG
TACCTCTTTTCGTGTTCGTGTTGATTGGGTTGTCATCCCTGTACCCCTTT
CTCATCGAAACGTCCCTACTGCTGTATACCTGTTGTTGTTTTTTTCGCGT
GCCGTGGCGTGGCATGGCTTGGCGTGGCATGGCGCGCTAGGCCCATCGAC
AGACCCTAATGTTCAGCGCGACCATGCCCGGAGATGTTCAGGCCATCGCT
AGCATCGCCATGAAGCCAAGCTACGAGGTCGTCGACTGCGTCGGGGAGGA
GGAAAACACCCACCAGCACGTCCCGCAAAAGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11829:814..3747+

>mRNA_E-fasciculatus_F_contig11829.1432.1 ID=mRNA_E-fasciculatus_F_contig11829.1432.1|Name=mRNA_E-fasciculatus_F_contig11829.1432.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1146bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11829:814..3747+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGTTGACGTCCTCGCTAAGGCTAAAACGGGTACCGGAAAAACCGTTGC
GTTCTTGATTCCCGCCATCGAGCGTGCGGCGAAGAGGGGGTACGGGAAGG
GCGTGTCCGCGCTCATCATCAGCCCCACGCGCGAGCTCGCCCAGCAGATC
GCCGTCGAGGCCCAGCAGGGCGTTGACGTCCTCGCTAAGGCTAAAACGGG
TACCGGAAAAACCGTTGCGTTCTTGATTCCCGCCATCGAGCGTGCGGCGA
AGAGGGGGTACGGGAAGGGCGTGTCCGCGCTCATCATCAGCCCCACGCGC
GAGCTCGCCCAGCAGATCGCCGTCGAGGCCCAGCAGATCATGTCCTTTCA
CAGGCTGAAGCTCATGTGTTCCGTTGGGGGCGTGAACGTCAACCGGGATC
TGAACCAGCTCAACTCGGGGGCCCCGGACATCATGGTGGCAACGCCGGGA
AGATCATGTCCTTTCACAGGCTGAAGCTCATGTGTTCCGTTGGGGGCGTG
AACGTCAACCGGGATCTGAACCAGCTCAACTCGGGGGCCCCGGACATCAT
GGTGGCAACGCCGGGAAGGCTCCTTGATCTGATGGAGAACCACGGTTTGG
GGCGAGACATGAGGGACCTGGACACCCTTGCATTCGACGAGGCTGACCAG
CTCCTCGAGATGGGCTTCCGCCCTGCCATCGAGAACATACTCAGGAATCT
GCAATCCAGCAAGGCTCCTTGATCTGATGGAGAACCACGGTTTGGGGCGA
GACATGAGGGACCTGGACACCCTTGCATTCGACGAGGCTGACCAGCTCCT
CGAGATGGGCTTCCGCCCTGCCATCGAGAACATACTCAGGAATCTGCAAT
CCAGCAAGGCCCATCGACAGACCCTAATGTTCAGCGCGACCATGCCCGGA
GATGTTCAGGCCATCGCTAGCATCGCCATGAAGCCAAGCTACGAGGTCGT
CGACTGCGTCGGGGAGGAGGAAAACACCCACCAGCACGTCCCGCAAAAGT
GAGCCCATCGACAGACCCTAATGTTCAGCGCGACCATGCCCGGAGATGTT
CAGGCCATCGCTAGCATCGCCATGAAGCCAAGCTACGAGGTCGTCGACTG
CGTCGGGGAGGAGGAAAACACCCACCAGCACGTCCCGCAAAAGTGA
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