mRNA_E-fasciculatus_F_contig11730.1369.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: D7G127_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G127_ECTSI) HSP 1 Score: 273 bits (698), Expect = 7.800e-92 Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVEKKVKNIKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVE+KVKN+KALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVM+ INKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK
Sbjct: 22 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVERKVKNLKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMIAINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 169
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: A0A164X6L5_DAUCS (Calcium load-activated calcium channel n=2 Tax=asterids TaxID=71274 RepID=A0A164X6L5_DAUCS) HSP 1 Score: 113 bits (283), Expect = 7.740e-29 Identity = 62/148 (41.89%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVEKKVKNIKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
A SW +YR Y+ LK I+ K +E K +P + K K + R+E L E+++DL + VVA+ L VV +N F G VAKLPFVPI LVQK+SHR L+GED TDCS+AF++ LC ++ N+ K +G P+
Sbjct: 30 AISWLLIYRTSSYKSLKSTIDKASKKLETMKTDPTAPKISAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGFLNNLFEGKAVAKLPFVPIKLVQKMSHRGLQGEDFTDCSMAFLYFLCSISIRTNLQKFLGFSPPR 177
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: A0A843TM09_COLES (Calcium load-activated calcium channel n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843TM09_COLES) HSP 1 Score: 111 bits (277), Expect = 7.770e-28 Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKK---AEPVGGSVEKKVKNIKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
A SW +YR P Y+ L+ I+ K +E K A + KK K + R+E L E+T+DL + VVAV L VV ++N F G VAKLPF P+SLV K+SHR L G DPTDCS+AF++ LC ++ N+ K +G P+
Sbjct: 36 AISWALIYRTPSYRSLRSSIDRASKKLETMKTSSAVATAPAAAKKTSKTKKMDRVETSLKESTRDLSLFKFKSGAVVAVVLFVVFGLLNSLFEGKTVAKLPFAPVSLVYKMSHRGLPGNDPTDCSMAFLYLLCSISIRTNLQKFLGFAPPR 186
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: A0A6J0JF51_RAPSA (Calcium load-activated calcium channel n=20 Tax=Brassicales TaxID=3699 RepID=A0A6J0JF51_RAPSA) HSP 1 Score: 109 bits (273), Expect = 2.660e-27 Identity = 60/148 (40.54%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVEKKVKNIKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
A SW +YR Y+ LK I+ K +E K E + K K + R+E L E+++DL + VVA+ L VV ++N F G VVAKLPF PI++V+K+SHR L+GED TDCS+AF++ LC ++ N+ K +G P+
Sbjct: 32 AISWILIYRTSSYKSLKHSIDRAAKKLETMKTENPSSKLTIKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGRVVAKLPFHPIAIVKKMSHRGLKGEDATDCSMAFLYLLCSISIRTNLQKFLGFSPPR 179
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: A0A2R6R539_ACTCC (Calcium load-activated calcium channel n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6R539_ACTCC) HSP 1 Score: 108 bits (271), Expect = 4.660e-27 Identity = 61/148 (41.22%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVEKKVKNIKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
A SW +YR Y+ LK I+ K +E K + + K K + R+E L E+++DL + VVAV L VV ++N F G VAKLPFVPI +VQK+SHR L+G+DPTDCS+AF++ LC ++ N+ K +G P+
Sbjct: 31 AISWVLIYRTTSYKSLKSSIDKASKKLEIMKTD---SPINKAKAKAKKMDRVETSLKESSRDLSLFKFKSGAVVAVVLFVVFGLLNSLFEGKAVAKLPFVPIRIVQKMSHRGLQGDDPTDCSMAFLYFLCSINIRTNLQKFLGFSPPR 175
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: A0A022RLZ3_ERYGU (Calcium load-activated calcium channel n=7 Tax=Lamiales TaxID=4143 RepID=A0A022RLZ3_ERYGU) HSP 1 Score: 108 bits (271), Expect = 5.300e-27 Identity = 62/151 (41.06%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKK---AEPVGGSVEKKVKNIKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
A SW +YR Y+ LK I+ K +E K A P ++ KK IK + R+E L E+++DL + VVA+ L +V ++N F G VAK+PFVPI LVQK+SHR L G+D TDCS+AF++ LC ++ N+ K +G P+
Sbjct: 30 AISWILIYRTASYKSLKSTIDKASKKLETMKTTDASPASSNLLKKSSKIKKMDRVESSLKESSRDLSIFKFKSGGVVALVLFMVFGLLNSLFEGKAVAKIPFVPIRLVQKMSHRGLTGDDMTDCSMAFLYLLCSISIRTNLQKFLGFSPPR 180
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: A0A2P5C5L7_TREOI (Calcium load-activated calcium channel n=1 Tax=Trema orientale TaxID=63057 RepID=A0A2P5C5L7_TREOI) HSP 1 Score: 108 bits (270), Expect = 6.760e-27 Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVEKKVKNIKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
A SW +YR Y+ L+ I+ K +E K E KK K K + R+E L E+++DL + VVA+ L VV ++N F G VVAKLPF P LV K+SHR L+G+DPTDCS+AF++ LC ++ N+ K +G P+
Sbjct: 31 AISWILIYRTNSYKSLRSSIDKAAKKLENMKTETSAKIAAKKSKT-KKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPR 177
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: S8EE16_9LAMI (Calcium load-activated calcium channel n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8EE16_9LAMI) HSP 1 Score: 108 bits (270), Expect = 7.110e-27 Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVEKKVKNIKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
A SW +YR Y+ L I+ K +E K ++ KK K + R+E L E+++DL + VVA+ L +V ++N F G VAK+PFVPI LVQK+SHR L G+D TDCS+AF++ LC ++ N+ KL+G P+
Sbjct: 30 AISWLLIYRTSSYKSLMSTIDKASKKLETMKTSDANSNILKKSSKTKKMDRVETSLKESSRDLSMFKFKSGAVVALVLFMVFGLLNSLFEGKAVAKIPFVPIRLVQKMSHRGLPGDDMTDCSMAFLYLLCSISIRTNLQKLLGFAPPR 177
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: A0A2R6S218_ACTCC (Calcium load-activated calcium channel n=5 Tax=asterids TaxID=71274 RepID=A0A2R6S218_ACTCC) HSP 1 Score: 108 bits (269), Expect = 9.550e-27 Identity = 61/149 (40.94%), Postives = 89/149 (59.73%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVEKKVKN-IKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
A SW +YR Y+ LK I+ K +E K + S+ K K+ K + R+E L E+ +DL + VVA+ L VV ++N F G VAKLPFVP+ +VQK+SHR L+G+DPTDCS+AF++ LC ++ N+ K +G P+
Sbjct: 31 AISWVLIYRTTSYKSLKSSIDKASKKLETMKTD---SSINNKPKSKAKKMDRVETSLKESNRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKAVAKLPFVPVRIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPR 176
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Match: A0A2J6LCA7_LACSA (Calcium load-activated calcium channel n=2 Tax=Asteraceae TaxID=4210 RepID=A0A2J6LCA7_LACSA) HSP 1 Score: 108 bits (269), Expect = 9.550e-27 Identity = 61/148 (41.22%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVEKKVKNIKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMVVINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPK 444
A SW +YR Y+ LK I+ K +E K + + KK K K + R+E L E+++DL + VVA+ L VV +N F G VAKLPFVP +VQK+SHR L+G+DPTDCS+AF++ LC ++ N+ K +G P+
Sbjct: 29 AISWLLIYRTTSYKSLKSSIDKASKKLETMKTDSTVAAAPKKSKT-KKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGFLNNLFEGKAVAKLPFVPARIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPR 175 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11730.1369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11730.1369.1 >prot_E-fasciculatus_F_contig11730.1369.1 ID=prot_E-fasciculatus_F_contig11730.1369.1|Name=mRNA_E-fasciculatus_F_contig11730.1369.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=148bp AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVEKKVKNIKALSback to top mRNA from alignment at E-fasciculatus_F_contig11730:22..4287+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11730.1369.1 ID=mRNA_E-fasciculatus_F_contig11730.1369.1|Name=mRNA_E-fasciculatus_F_contig11730.1369.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4266bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11730:22..4287+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11730:22..4287+ >mRNA_E-fasciculatus_F_contig11730.1369.1 ID=mRNA_E-fasciculatus_F_contig11730.1369.1|Name=mRNA_E-fasciculatus_F_contig11730.1369.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=888bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11730:22..4287+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |