mRNA_E-fasciculatus_F_contig11726.1364.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: D7G2V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V0_ECTSI) HSP 1 Score: 290 bits (741), Expect = 1.490e-96 Identity = 151/158 (95.57%), Postives = 154/158 (97.47%), Query Frame = 1
Query: 1 MVLPTSYSLRTLLLLTVAVLLSYAGKPASGMRVSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVRK 474
MVLPT Y+LRTLLLLT AVLLSYAGKPASGMR+SVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLK EGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFK+QA PTLKTNFFDTAAFTEKMLPLVRK
Sbjct: 1 MVLPTLYTLRTLLLLTAAVLLSYAGKPASGMRISVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKEEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRK 158
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: A0A7S4D6Z1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6Z1_HETAK) HSP 1 Score: 149 bits (376), Expect = 6.690e-43 Identity = 74/131 (56.49%), Postives = 100/131 (76.34%), Query Frame = 1
Query: 82 ASGMRVSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVRK 474
A+ +R++VVTGANKGIGL IA+K A LC+LT+R LG +A ++L EGL +VV+KQLDI D +SVE FA+++E+E+G+ D LVNNA IAFK +DPTPF EQA PT++ N+F TA + +LPLVR+
Sbjct: 35 AAALRIAVVTGANKGIGLEIARKFGAAEDTLCILTARNADLGSRACEELAKEGL-NVVFKQLDIDDSSSVEAFATQMEEEYGKIDTLVNNAAIAFKAADPTPFSEQAEPTVRVNYFGTARVLDALLPLVRR 164
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: A0A836C9X3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X3_9STRA) HSP 1 Score: 141 bits (356), Expect = 9.940e-39 Identity = 77/128 (60.16%), Postives = 91/128 (71.09%), Query Frame = 1
Query: 94 RVSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLESVVYKQLDIGDPASVERFASELEQEF-GRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVRK 474
RV +VTGANKGIGL IA+KL G LCVLT+R G+ A + L +EG V ++QLDI DP S ERFA + EQEF D LVNNAG AFKGSDPTPF EQA PT+ NFF T A TE++LPLV++
Sbjct: 4 RVGIVTGANKGIGLEIARKLGREQGWLCVLTARDEERGRSAAESLLSEGA-GVRFRQLDISDPDSRERFAKDAEQEFTAGIDALVNNAGFAFKGSDPTPFAEQAEPTMDINFFSTVATTERLLPLVKR 130
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: W7T5T2_9STRA (Carbonyl reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5T2_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.900e-38 Identity = 69/137 (50.36%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 64 SYAGKPASGMRVSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVRK 474
S+ AS +++VTG+NKGIGL I KKLA + +L +R P+LG++A +L+ GLE+V Y+ LD+ S+E F E+++++GR D+LVNNAGIAFKG DPTPF++QAAPT KTNF+ T + M PL+RK
Sbjct: 45 SHLAMSASPGPITIVTGSNKGIGLEILKKLA-PTSSVAILAARNPSLGEQAAQELRDHGLENVKYRPLDVSSAESIEHFVKEIQKDYGRADILVNNAGIAFKGRDPTPFRDQAAPTFKTNFWGTVELIDAMTPLLRK 180
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: A0A7S1IHE9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IHE9_9EUGL) HSP 1 Score: 133 bits (334), Expect = 3.330e-36 Identity = 67/127 (52.76%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 94 RVSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVRK 474
R++VVTGANKGIG IA+ L APG LC++ R+P+ GQ A L+AEG LD+ D ASV FA +L+ ++G D LVNN IAFK DPTPF++QA PTL TNFF T A + ++PL+RK
Sbjct: 12 RIAVVTGANKGIGYEIARGLGQAPGWLCIMACRSPSQGQAAAAQLQAEGCRVHFLMALDLDDRASVAAFAHQLQAQYGGIDALVNNGAIAFKAKDPTPFQQQARPTLHTNFFGTVAVCDALVPLIRK 138
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: A0A7S2UVT3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVT3_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.370e-35 Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 97 VSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLES----VVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVRK 474
++VVTG+NKGIG +A KLA P +C++ +R GQ+A ++ G + V+KQLDI D SV+RF E++ E+GR DVLVNNA IAFKG+DPTPF+ QAAPTL+TNF+ T T+ +LPL+R+
Sbjct: 29 IAVVTGSNKGIGKEVAIKLASTPNTICIVAARDMNRGQQAAQEVNIAGQTAGGGGAVFKQLDIADNTSVQRFMQEMQSEYGRLDVLVNNAAIAFKGADPTPFQYQAAPTLRTNFWATVQVTDALLPLLRQ 158
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: A0A7S1IHI8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IHI8_9EUGL) HSP 1 Score: 133 bits (334), Expect = 2.470e-35 Identity = 67/127 (52.76%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 94 RVSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVRK 474
R++VVTGANKGIG IA+ L APG LC++ R+P+ GQ A L+AEG LD+ D ASV FA +L+ ++G D LVNN IAFK DPTPF++QA PTL TNFF T A + ++PL+RK
Sbjct: 12 RIAVVTGANKGIGYEIARGLGQAPGWLCIMACRSPSQGQAAAAQLQAEGCRVHFLMALDLDDRASVAAFAHQLQAQYGGIDALVNNGAIAFKAKDPTPFQQQARPTLHTNFFGTVAVCDALVPLIRK 138
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: A0A7S0XB88_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XB88_9STRA) HSP 1 Score: 129 bits (325), Expect = 5.550e-34 Identity = 64/125 (51.20%), Postives = 95/125 (76.00%), Query Frame = 1
Query: 97 VSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVR 471
++VVTG+NKGIG I KKL+ G+ +L +R LG +A ++L+++GL+ V +++LDI S++ F ++L+ ++G+CDVLVNNA IAFKGSDPTPFK QA PT+KTN+F T + T+ MLPL++
Sbjct: 22 IAVVTGSNKGIGYEIVKKLSSI-GYKTILAARNVNLGSQAANNLRSQGLD-VEFRELDISSDESIKAFVNKLQSDYGKCDVLVNNAAIAFKGSDPTPFKLQAEPTIKTNYFGTLSLTKLMLPLLQ 144
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: H0Y020_OTOGA (Uncharacterized protein n=3 Tax=Otolemur garnettii TaxID=30611 RepID=H0Y020_OTOGA) HSP 1 Score: 122 bits (306), Expect = 7.170e-33 Identity = 71/126 (56.35%), Postives = 84/126 (66.67%), Query Frame = 1
Query: 94 RVSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVR 471
RV++VTGANKGIGLAI + L VLT+R PA GQ AV L+AEGL S + QLDI DP S+ L +E+G DVLVNNAGI F+ SDPTPF QA T+KTNFF T ++LPLVR
Sbjct: 6 RVALVTGANKGIGLAIVRSLCHQFSGDVVLTARDPARGQAAVQQLQAEGL-SPRFHQLDIDDPQSIRALRDFLRREYGGLDVLVNNAGIVFQPSDPTPFHVQAHMTMKTNFFGTRDVCTELLPLVR 130
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Match: A0A7S3GV84_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV84_9STRA) HSP 1 Score: 126 bits (316), Expect = 9.440e-33 Identity = 66/128 (51.56%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 91 MRVSVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKAEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKEQAAPTLKTNFFDTAAFTEKMLPLVRK 474
M++++VTG NKGIG I KKL GA G +L R LGQ+A +LK G + V Y+ LDI D S+ RF+ ++ E+G D+LVNNA IAFK SDPTPFKEQ PT++ NFF T TE ++PL++K
Sbjct: 1 MKLAIVTGGNKGIGYEICKKL-GAAGVKIILACRNEVLGQEAAANLKELGYD-VEYRNLDISDDWSIARFSRDISDEYGHVDILVNNAAIAFKESDPTPFKEQTLPTIEPNFFGTMRITESLMPLLQK 126 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11726.1364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11726.1364.1 >prot_E-fasciculatus_F_contig11726.1364.1 ID=prot_E-fasciculatus_F_contig11726.1364.1|Name=mRNA_E-fasciculatus_F_contig11726.1364.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=159bp MVLPTSYSLRTLLLLTVAVLLSYAGKPASGMRVSVVTGANKGIGLAIAKKback to top mRNA from alignment at E-fasciculatus_F_contig11726:1560..4242+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11726.1364.1 ID=mRNA_E-fasciculatus_F_contig11726.1364.1|Name=mRNA_E-fasciculatus_F_contig11726.1364.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2683bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11726:1560..4242+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11726:1560..4242+ >mRNA_E-fasciculatus_F_contig11726.1364.1 ID=mRNA_E-fasciculatus_F_contig11726.1364.1|Name=mRNA_E-fasciculatus_F_contig11726.1364.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=954bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11726:1560..4242+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |