mRNA_E-fasciculatus_F_contig11603.1286.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: D7G038_ECTSI (Integral membrane protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G038_ECTSI) HSP 1 Score: 227 bits (579), Expect = 2.030e-66 Identity = 151/191 (79.06%), Postives = 153/191 (80.10%), Query Frame = 2
Query: 2 LAAQFASLTLLEEGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPAEGQKEEEE-----EEATLGRAVVAGAAAVALAEKAAETQAVNAAVLAGEKAGGVSVGGSXXXXXXXXXXXXXEDGG----PAEPVRKKRGRFVRRTSVVSM 547
LAAQFASLTLLEEGKTMGDVR KLSRDFTPTLKNAILFWPVVSVINS FVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYP E QKEEEE + ATLGRAVV G+AAVALAEKAAE QA XXXXXXXXXXXXX GG PAEP RKKRGRFVRRTSVVSM
Sbjct: 66 LAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSAFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPTE-QKEEEEAASRQDAATLGRAVVVGSAAVALAEKAAEKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEEGVPAEPARKKRGRFVRRTSVVSM 255
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: A0A6H5JW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW72_9PHAE) HSP 1 Score: 219 bits (558), Expect = 6.870e-63 Identity = 139/204 (68.14%), Postives = 141/204 (69.12%), Query Frame = 2
Query: 2 LAAQFASLTLLEEGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPAEGQKEEEEEEATLGRAVVAGAAAVALAEKAAETQAVNAAVL----------------------AGEKAGGVSVGGSXXXXXXXXXXXXXEDGGPAEPVRKKRGRFVRRTSVVSM 547
LAAQFASLTLLEEGKTMGDVR KLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPAE QKEE EEEA AVV GAAA+ALAEKAA AGE AGG E+ PAEP RKKRGRFVRRTSVVSM
Sbjct: 110 LAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPAE-QKEEGEEEA----AVVTGAAAIALAEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGETAGG-------------------EERVPAEPARKKRGRFVRRTSVVSM 289
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: UPI0004CC97D9 (protein Mpv17 n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CC97D9) HSP 1 Score: 59.7 bits (143), Expect = 1.280e-6 Identity = 25/69 (36.23%), Postives = 43/69 (62.32%), Query Frame = 2
Query: 32 LEEGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGM 238
L +GK +G ++ KL+ ++ L N WP+V ++N TFVP+ + +F V VFWN Y+S++ N + +
Sbjct: 111 LMQGKDIGGIKTKLTNEYKDILINNYKLWPMVQLVNFTFVPLHYQVLFVQSVAVFWNTYVSFRTNRDAL 179
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: H6BY33_EXODN (Uncharacterized protein n=1 Tax=Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) TaxID=858893 RepID=H6BY33_EXODN) HSP 1 Score: 57.4 bits (137), Expect = 6.860e-6 Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 2
Query: 14 FASLTLLEEGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYIS 214
F + + +GK+ V+ ++ RD P + N+ WP++++IN TFVPV R + +S VG+FW +Y+S
Sbjct: 105 FVTAMAIFKGKSWKGVQREVERDVIPLMINSWKLWPLIALINFTFVPVNRRVIVASVVGLFWGIYLS 171
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: J9ILG7_9SPIT (Pmp22 family protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9ILG7_9SPIT) HSP 1 Score: 57.0 bits (136), Expect = 8.490e-6 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 2
Query: 38 EGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQAN 226
+GKT+ N L PTL +++ WP+ IN TFVP L +F++F+ +F+N Y+SY N
Sbjct: 95 DGKTLQQTSNDLQHKLVPTLISSLKVWPLAQFINFTFVPPLYHVLFTNFIQIFFNAYLSYMHN 157
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: W9YB75_9EURO (Uncharacterized protein n=1 Tax=Capronia epimyces CBS 606.96 TaxID=1182542 RepID=W9YB75_9EURO) HSP 1 Score: 56.6 bits (135), Expect = 1.220e-5 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 2
Query: 38 EGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYIS 214
+GK V+ ++ RD P + N+ WP+V++IN TFVPV R + +S VG+FW +Y+S
Sbjct: 111 KGKGWRGVQREVERDLVPLMINSWKLWPLVALINFTFVPVNQRVIVASVVGLFWGIYLS 169
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: A0A1D2NCD3_ORCCI (Protein Mpv17 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NCD3_ORCCI) HSP 1 Score: 56.2 bits (134), Expect = 2.000e-5 Identity = 24/77 (31.17%), Postives = 45/77 (58.44%), Query Frame = 2
Query: 8 AQFASLTLLEEGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGM 238
A F + L +G ++ ++N ++++FT + + WP V +I+ + VP+ R +F V VFWN Y+S++ N G+
Sbjct: 102 ANFLGINSLMQGNSLNQMKNDITKNFTDVVISNYKLWPAVQLISFSVVPLQYRVLFVQTVAVFWNTYLSWKTNSEGI 178
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: UPI001D017293 (protein Mpv17 n=1 Tax=Cotesia glomerata TaxID=32391 RepID=UPI001D017293) HSP 1 Score: 56.2 bits (134), Expect = 2.030e-5 Identity = 24/69 (34.78%), Postives = 40/69 (57.97%), Query Frame = 2
Query: 32 LEEGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGM 238
L +G + ++ KLS ++ L N WP+V ++N TFVP+ + +F V VFWN Y+S++ N +
Sbjct: 111 LMQGNDINGIKTKLSNEYKDILINNYKLWPMVQLVNFTFVPLHYQVLFVQSVAVFWNTYVSFRTNRGAL 179
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: A0A1X2GDZ1_9FUNG (Uncharacterized protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GDZ1_9FUNG) HSP 1 Score: 53.5 bits (127), Expect = 7.110e-5 Identity = 26/72 (36.11%), Postives = 40/72 (55.56%), Query Frame = 2
Query: 2 LAAQFASLTLLEEGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISY 217
LA +++LE G+ +R K +T L NA FWP S+ + +P++ RP+ SSF + WN Y+SY
Sbjct: 49 LAIFMTGISVLE-GRNGQQIREKFETSYTKGLYNAYHFWPFASLFTQSCIPLIYRPMISSFFSIGWNSYLSY 119
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Match: A0A7E4VSH1_PANRE (Uncharacterized protein n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4VSH1_PANRE) HSP 1 Score: 53.1 bits (126), Expect = 7.630e-5 Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 2
Query: 32 LEEGKTMGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISY 217
L EG + +L RD+T + N WPVV +IN +FVP+ R VF V + WNVY+S+
Sbjct: 58 LLEGNGIKSAYKRLCRDYTDIMTNFYKLWPVVQLINYSFVPLNYRVVFIQAVALLWNVYLSF 119 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11603.1286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11603.1286.1 >prot_E-fasciculatus_F_contig11603.1286.1 ID=prot_E-fasciculatus_F_contig11603.1286.1|Name=mRNA_E-fasciculatus_F_contig11603.1286.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=167bp MGDVRNKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWback to top mRNA from alignment at E-fasciculatus_F_contig11603:474..2393+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11603.1286.1 ID=mRNA_E-fasciculatus_F_contig11603.1286.1|Name=mRNA_E-fasciculatus_F_contig11603.1286.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1920bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11603:474..2393+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11603:474..2393+ >mRNA_E-fasciculatus_F_contig11603.1286.1 ID=mRNA_E-fasciculatus_F_contig11603.1286.1|Name=mRNA_E-fasciculatus_F_contig11603.1286.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1002bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11603:474..2393+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |