mRNA_E-fasciculatus_F_contig116.1280.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig116.1280.1
Unique NamemRNA_E-fasciculatus_F_contig116.1280.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: D7FQR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR2_ECTSI)

HSP 1 Score: 851 bits (2199), Expect = 7.090e-308
Identity = 465/546 (85.16%), Postives = 479/546 (87.73%), Query Frame = 1
Query:    1 QAVMQVLVRDDLADALIQTASSTLRNAATSNVN--ASADGVAPMTTNGASATKSSFPSTWSPGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGMTFIDASALRTILELKSLVDLGKVRPENLPPCVGCGETAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLGVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREIGEINSVLDAVDESAG--------------------ERS*AGGAHPGAVEGTQR----WSHRKRFAKLKSQKAEQNMLADYLAARATKNDNDACTEGMSRLRRAYVTERQEELTARLMGHSNPKLAGGLKMKAFFESPYGDDVVSGLMNHQVWQARQQKKDLEQKDLERQKRAEWVRLKQLEDPQLAMYFKEEMTARNVYVINKLRWDRRALKNVASALKDYNQTGGRKYDFPETVSAS 1560
            Q  MQVLV DDLADALIQTASSTLRNAATSN N  AS+D VA  TTNG SATKSSFPSTWSPGSSIQL+PPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCT+CNGMTFIDASALRTILELKSLVD GKVRPENLPPCVGCGETAGLRVGAHDFLSLI+GGKEALARRRRLERIAAKMLQRAFRRHLHIQWRK+EIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWL VVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLV RTGFRPPRIVVEQNIREI     VL+   E  G                    E           V   QR    WSHRKRF+KLKSQKAEQN+L DYLA RATKN++DACTEGMSRLRRAYVTERQEELTARLMGHSNPKLAGGLKMKAFFESPYGDDVVSGLMNHQVWQA QQK+DLEQKDLERQKRAEWVRLKQLEDPQLAMYFKEEMTARNVYVINKLRWDRRAL NVASALKDYN+TGGRKYDFPET  ++
Sbjct:   14 QIAMQVLVGDDLADALIQTASSTLRNAATSNANQDASSDDVARTTTNGTSATKSSFPSTWSPGSSIQLIPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTQCNGMTFIDASALRTILELKSLVDFGKVRPENLPPCVGCGETAGLRVGAHDFLSLIQGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKSEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLRVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVLRTGFRPPRIVVEQNIREIA--TRVLEREAELVGRIQARWRGLSVRRYLVVFRRELRRHREVRASMVFRLQRTVRGWSHRKRFSKLKSQKAEQNILGDYLATRATKNNDDACTEGMSRLRRAYVTERQEELTARLMGHSNPKLAGGLKMKAFFESPYGDDVVSGLMNHQVWQAWQQKRDLEQKDLERQKRAEWVRLKQLEDPQLAMYFKEEMTARNVYVINKLRWDRRALNNVASALKDYNRTGGRKYDFPETTGSA 557          
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: A0A7S2R5D9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5D9_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.690e-56
Identity = 161/487 (33.06%), Postives = 250/487 (51.33%), Query Frame = 1
Query:  178 PGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGMTFIDASALRTILELKSLVDLGKVRPENLPPCVGCGETAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLGVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREIGEINSVLDAVDESAGERS*AG------------------GAHPGAVEGTQRWSH----RKRFAKLKSQKAEQNMLADYLAARATKNDNDACTEGMSRLRRAYVTERQEELTARLMGHSNPKLAGGLKMKAFFESPYGDDVVSGLM-------NHQVWQARQQKKDLEQKDLERQKRAEWVRLKQLEDPQLAMYFKEEMTARNVYVINKLRWDRRALKNVASALKDYNQTGGRKYDFPETV 1551
            P S++   PP+++    RS  + A    FD  G+    GL++ LFY S +L+C+KCN M  ID+   R+   L         R E LP C  CG T    VG+HD    I   +E L    R ++ A  ++QR++R +L  QW +AE  R++   +L YR+A +I+A++RGRLGRR  +T   + ++ +AH  L+  A+    +++RVFWYK + + + LY DY +L  RTGF+PPR+VVE+N++EI     + +A   +  ++   G                       A    QR  H    R+     K    +  M  +Y+ ++  + ++        +L   Y  ERQEE TARL+G  +P  A G KMKAF +S YG D V+ LM       N  V +  Q+  D+ +       R E+VR +QLE   L +Y+KEEM  R+V +I+KL  +R    N A  L  +N+ G  K+++P+ +
Sbjct:   96 PSSAVAHEPPQMTCLPARS--KAADAIRFDSSGFNTGIGLQKDLFYWSPFLTCSKCNNMAIIDSMNARSFSGLMQTSLAKTARAEPLPKCSVCGSTQDWWVGSHDLTKFIGASREELEALLRRQKKAVVVIQRSYRFYLRRQWGRAERQRKKIRAMLEYRAASIIEALIRGRLGRRKAKTTVSIRIIMRAHSKLVSRAVSDRSYKRRVFWYKPD-QLKILYLDYVVLCERTGFQPPRVVVEENLKEIARRIRIREAFLTTLVQKRWRGITVRRFMVVYMREVFRIRELQCAAAFKIQRLVHGFRGRRYVEAHKINVFKAKMSKEYMHSKHVQLESQDKAAQKVKLANHYAKERQEERTARLVGLVHPGAADGHKMKAFNQSAYGTDSVTDLMLELRDMENDTVTRETQETNDVSE-------RGEFVRQRQLEGRALKLYYKEEMRQRSVELIDKLTKER-PQSNAAKLLAAHNRKG-IKFNYPKAI 570          
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: A0A836CFY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFY4_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.880e-37
Identity = 119/350 (34.00%), Postives = 158/350 (45.14%), Query Frame = 1
Query:  190 IQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGMTFIDASALRTILELKSLVD-----------------------------------------------------------------------------------------------------------LGKVRPENLPPCVGCGETAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLGVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREI 918
            +QL+PP+ +D TD+SL RRA    FD  G+  +RGLRR LFY SG+++C  CN +TF+DA+ALRT + L+                                                                                                               LG    E LP C GCG TA LRVG  DF   I  G   LA+R    R AA ++QRA+R +L ++  +A  VR  T  LL YR A+ +QA++RGRLGRRV  T++ L V+   H  ++  AL   P R+R+FWY  +AE+  L+ADY  LV RTGFRPPR +VE NI E+
Sbjct:   16 VQLVPPQQNDCTDQSLPRRAE-GAFDACGFAERRGLRRSLFYVSGFVTCAACNAVTFVDAAALRTAMHLRGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPASSDAGAVAAVGGSATAGRPQSPRHSRQQPALNAAPAAAHSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGAAPAEALPVCSGCGLTATLRVGVRDFTHDIAQGHVDLAQRAARRRGAAAVVQRAYRSYLAVRRDRALRVRLLTKHLLEYRCARAVQAVMRGRLGRRVARTQRHLRVLAGCHPAVLHWALHGCPERRRLFWYHIKAEQDLLFADYVALVERTGFRPPRGLVEANIAEL 364          
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: F0YRG3_AURAN (Expressed protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRG3_AURAN)

HSP 1 Score: 149 bits (376), Expect = 2.990e-37
Identity = 102/254 (40.16%), Postives = 146/254 (57.48%), Query Frame = 1
Query:  160 FPSTWSPGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGMTFIDASALRTI-LELKSLVDLGKVRPENLPPCVGCGETAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLGVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREI 918
             P++++ GSS+ L+ PKL DT+DRSL         D    R +  L RP+FY + Y++C KCN + FIDA+ +R+    +   +       E L  C  C  TA   +GAHDFL  I G K  L ++ ++   AA +L R++R +L  Q  +A   R++    L+   A +I+A+LRGRLGRR   T  +L  V+KAH + +  AL      K VFWYK++ + R L+ DY +LV RTGF PPR VVE NI+EI
Sbjct:   43 LPTSFTRGSSMNLVTPKLVDTSDRSLVETFSKTFRDG---RKESDLERPMFYLTPYITCDKCNTLMFIDAAKVRSFSARMPGGICEVSAGDETLGVCPSCASTANFCLGAHDFLGKIAGSKAELIKQIKIRHAAAFLLGRSYRFYLRRQCARACRTREKVWAYLQRLCAAIIEAVLRGRLGRRKARTCAYLNYVQKAHPISLSKALSLGGEFK-VFWYKSKEQIRLLFNDYLVLVERTGFVPPRYVVEANIQEI 292          
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: A0A8J2X0I4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0I4_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.560e-36
Identity = 138/422 (32.70%), Postives = 193/422 (45.73%), Query Frame = 1
Query:  160 FPSTWSPGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPLFYKSGYLSCTKCNGMTFIDASALRTI-LELKSLVDLGKVRPENLPPCVGCGETAGLRVGAHDFLSLIE----GGKEALARRRRLERIAAKMLQRAFRRHLHIQWRKAEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLGVVKKAHRLLIKHAL----------DHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREIG--------------------------------EINSVLDAVDESAGERS*AGGAHPGAVEGTQRWSHRKRFAKLKSQKAEQNMLADYLAARATKNDNDACTEGMSRLRRAYVTERQEELTARLMGHSNPKLA---GGLKMKAFFESPYGDDVV 1275
             PS+++  S + L+   + DTTDR L + A    F P     +R +++PLFY + +++C+KCN + FIDA+  R     +   V L +   E L  C GC  T  L VGAHDF+  IE    G +EA+A+  +  + AA +L   +R +L  Q  +A   RQ+    L +R A ++++  RGRLGRR   T + L  +K  H + +K AL                K+VFWY  + +   LY DY +L +RTGF PPRI+VEQNI EI                                 EI  + +   +S       G    G V      + + R     +Q   +     Y   R  K D        SRLR+ Y  ER EE TAR  G  NP  A   GG KM AF +S YG D V
Sbjct:   41 LPSSFTRDSEMHLVDQHMIDTTDRHLVK-AFCEQFRPGAT--ERDMQKPLFYLTPFITCSKCNSILFIDAANARCFGAPVPESVRLKRGGNETLAVCPGCAMTENLEVGAHDFMEDIEDASLGAREAMAKEMKKRKRAASLLIMVYRFYLRRQLARAARTRQKCRYYLYHRCASIVESAARGRLGRRRARTFENLRYIKNRHPISLKKALAQKFEVDKRTGESKRLKKVFWYHTKVQLDCLYRDYFILCQRTGFVPPRIIVEQNIEEIARRIRVREEYLITLIQALYRGIILRKCLEIYKYEIIRIREIRAQSCFR---IGTIWRGYV------ARKLRVPARIAQVLRRKRPEQYARERREKRDRIRAKAARSRLRQLYEKERAEEATARASGLVNPNNAPGGGGKKMAAFLDSAYGSDDV 450          
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: A0A7S1U287_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U287_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.680e-17
Identity = 83/248 (33.47%), Postives = 110/248 (44.35%), Query Frame = 1
Query:  691 RLGRRVFETEKWLGVVKKAHRLLIKHAL--------------DHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREIGEINSVLDAVDESAGERS*AGGAHPGAVEGTQRWSHRKRFAKL-----------------KSQKAEQNMLADYLAAR---ATKNDNDACTEGMSR---------------LRRAYVTERQEELTARLMGHSNPKLAGGLKMKAFFESPYGDDVVSGLM 1287
            RL +R  + E+ L V+K AH +++  AL                 P  K+VFWY+   E   LYADYR+LV RTG++PP  +VE NI EI    ++L A             A+   V+   R    ++F K+                 K Q+  +   A   A R   A KN  +       R               LR  Y  ER EE TARL+G ++P LAGG KMKAF+ES YG D VS  M
Sbjct:   14 RLAQRALQVERDLKVIKGAHAIVLSRALRAKDFPLTAEDKARGEPPPPKKVFWYRTRQEVDLLYADYRILVDRTGYQPPLFMVENNIHEIARRCNILIA-------------AYATRVQARWRGLTVRKFLKIFRRECVRLREFRSACVMKIQRCYRGARARRCATRMRTANKNAKEQAAYAALRAEEKREKDEHLYKDILRNRYKKERAEERTARLIGLTHPGLAGGNKMKAFYESSYGSDEVSTRM 248          
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: A0A8K1CDF9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDF9_PYTOL)

HSP 1 Score: 94.7 bits (234), Expect = 4.470e-17
Identity = 71/208 (34.13%), Postives = 112/208 (53.85%), Query Frame = 1
Query:  307 LFY---KSGYLSCTKCNGMTFIDASALRTILELKSLVDLGKVRPENLPPCVGCGETAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHL-HIQWRKAEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLGVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREI 918
            LFY   K+ YL+C++CN +TFID   +R     +    L     E +P C GCG T  LR G   F   I   ++A+    R    A +++QR  R  +  +++R+ ++  +R I+ +  +SA ++Q  +RG   RR    E+ L +++  H  ++K AL   P    VFWY N +E + L+ +YR  VRR+G +PP + VE NI EI
Sbjct:   40 LFYSDFKTPYLTCSRCNSVTFIDVRRVRPKDAPRDPDALSLY--EQVPICAGCGTTKYLRAGVVSFQEKIAEEQQAIKEFERKRGPATELIQRIARGFMGRLEYRRRKLAWERYIRKIN-QSATMVQTRVRGMQARRRTILERCLRIIRTLHPSILKFALTARPDCPPVFWYDNPSELQILFWNYREFVRRSGGKPPLVKVETNILEI 244          
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: A0A7S1U265_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U265_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 7.670e-17
Identity = 83/248 (33.47%), Postives = 110/248 (44.35%), Query Frame = 1
Query:  691 RLGRRVFETEKWLGVVKKAHRLLIKHAL--------------DHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREIGEINSVLDAVDESAGERS*AGGAHPGAVEGTQRWSHRKRFAKL-----------------KSQKAEQNMLADYLAAR---ATKNDNDACTEGMSR---------------LRRAYVTERQEELTARLMGHSNPKLAGGLKMKAFFESPYGDDVVSGLM 1287
            RL +R  + E+ L V+K AH +++  AL                 P  K+VFWY+   E   LYADYR+LV RTG++PP  +VE NI EI    ++L A             A+   V+   R    ++F K+                 K Q+  +   A   A R   A KN  +       R               LR  Y  ER EE TARL+G ++P LAGG KMKAF+ES YG D VS  M
Sbjct:   14 RLAQRALQVERDLKVIKGAHAIVLSRALRAKDFPLTAEDKARGEPPPPKKVFWYRTRQEVDLLYADYRILVDRTGYQPPLFMVENNIHEIARRCNILIA-------------AYATRVQARWRGLTVRKFLKIFRRECVRLREFRSACVMKIQRCYRGARARRCATRMRTANKNAKEQAAYAALRAEEKREKDEHLYKDILRNRYKKERAEERTARLIGLTHPGLAGGNKMKAFYESSYGSDEVSTRM 248          
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: A0A329SZ32_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZ32_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.780e-16
Identity = 68/204 (33.33%), Postives = 105/204 (51.47%), Query Frame = 1
Query:  325 YLSCTKCNGMTFIDASALRTILELKSLVDLGKVRP-----ENLPPCVGCGETAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHL-HIQWRKAEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLGVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREI 918
            YL+C +CN +TF+D   +R   +  +   +G+        E +P C GCG T  LR G   F   IE  + A+    R    A  +LQR  R  L  +++R+  + R+R ++ ++ R+A  IQ  +RG   RR    E+ L +++     ++ +AL   P+   VFWY N AE    Y +YR  VRR+G +P  I VE N+ EI
Sbjct:   62 YLTCQRCNSVTFVDLKRVRRKADQLAAAKVGEGEDTTCLYEQVPKCPGCGSTRYLRAGVVSFQEQIEEERNAIKEFERRRVPATALLQRIARGFLGRMEFRRRLVERERYLRKIK-RAATKIQTRVRGMQARRRTVIERCLRIIRFMAPQILSYALASRPNEPPVFWYSNTAELSVFYWNYREYVRRSGGKPTLIKVENNVLEI 264          
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Match: H3GJ84_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJ84_PHYRM)

HSP 1 Score: 90.1 bits (222), Expect = 1.520e-15
Identity = 69/199 (34.67%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  325 YLSCTKCNGMTFIDASALRTILELKSLVDLGKVRPENLPPCVGCGETAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHL-HIQWRKAEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLGVVKKAHRLLIKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNIREI 918
            YL+C +CN +TFID   +R   +     +      E +P C GCG T  LR G   F   IE  + A+    R    A  +LQR  R  L  +++R+  + R R ++ +  R+A  IQ  +RG   RR    E+ L ++      ++ +AL   P+   VFWY N AE    Y +YR  VRR+G RP  I VE N+ EI
Sbjct:   64 YLTCQRCNSVTFIDVLRVRRKADQLGEREDTTFLYEEVPKCPGCGSTRYLRAGVVSFQEQIEEERNAIKEFERRRVPATALLQRIARGFLGRLEFRRRLVARDRYLRKIN-RAATRIQTRVRGMQARRRTVIERCLRIISFMAPQILSYALASRPNEPPVFWYTNTAELSVFYWNYREYVRRSGGRPTLIKVENNVLEI 261          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig116.1280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FQR2_ECTSI7.090e-30885.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2R5D9_9STRA1.690e-5633.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CFY4_9STRA1.880e-3734.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YRG3_AURAN2.990e-3740.16Expressed protein (Fragment) n=1 Tax=Aureococcus a... [more]
A0A8J2X0I4_9STRA3.560e-3632.70Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1U287_9STRA2.680e-1733.47Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A8K1CDF9_PYTOL4.470e-1734.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1U265_9STRA7.670e-1733.47Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A329SZ32_9STRA2.780e-1633.33Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
H3GJ84_PHYRM1.520e-1534.67Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig116contigE-fasciculatus_F_contig116:27423..30536 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score552.4
Seed ortholog evalue1.4e-154
Seed eggNOG ortholog2880.D7FQR2
EggNOG free text desc.Short calmodulin-binding motif containing conserved Ile and Gln residues.
EggNOG OGs2A3HT@1,2RY5B@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size1560
Cds size966
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927671.0282948-UTR-E-fasciculatus_F_contig116:27422..274311622927671.0282948-UTR-E-fasciculatus_F_contig116:27422..27431Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 27423..27431 +
1695995643.6913807-UTR-E-fasciculatus_F_contig116:27422..274311695995643.6913807-UTR-E-fasciculatus_F_contig116:27422..27431Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 27423..27431 +
1622927671.0916133-UTR-E-fasciculatus_F_contig116:28964..290041622927671.0916133-UTR-E-fasciculatus_F_contig116:28964..29004Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 28965..29004 +
1695995643.7309906-UTR-E-fasciculatus_F_contig116:28964..290041695995643.7309906-UTR-E-fasciculatus_F_contig116:28964..29004Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 28965..29004 +
1622927671.107533-UTR-E-fasciculatus_F_contig116:29098..292521622927671.107533-UTR-E-fasciculatus_F_contig116:29098..29252Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 29099..29252 +
1695995643.7412672-UTR-E-fasciculatus_F_contig116:29098..292521695995643.7412672-UTR-E-fasciculatus_F_contig116:29098..29252Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 29099..29252 +
1622927671.120306-UTR-E-fasciculatus_F_contig116:29495..296221622927671.120306-UTR-E-fasciculatus_F_contig116:29495..29622Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 29496..29622 +
1695995643.751001-UTR-E-fasciculatus_F_contig116:29495..296221695995643.751001-UTR-E-fasciculatus_F_contig116:29495..29622Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 29496..29622 +
1622927671.1315942-UTR-E-fasciculatus_F_contig116:29948..300581622927671.1315942-UTR-E-fasciculatus_F_contig116:29948..30058Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 29949..30058 +
1695995643.760851-UTR-E-fasciculatus_F_contig116:29948..300581695995643.760851-UTR-E-fasciculatus_F_contig116:29948..30058Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 29949..30058 +
1622927671.1465743-UTR-E-fasciculatus_F_contig116:30382..305361622927671.1465743-UTR-E-fasciculatus_F_contig116:30382..30536Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 30383..30536 +
1695995643.7700617-UTR-E-fasciculatus_F_contig116:30382..305361695995643.7700617-UTR-E-fasciculatus_F_contig116:30382..30536Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig116 30383..30536 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927671.0415654-CDS-E-fasciculatus_F_contig116:27431..279331622927671.0415654-CDS-E-fasciculatus_F_contig116:27431..27933Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig116 27432..27933 +
1695995643.701633-CDS-E-fasciculatus_F_contig116:27431..279331695995643.701633-CDS-E-fasciculatus_F_contig116:27431..27933Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig116 27432..27933 +
1622927671.0527437-CDS-E-fasciculatus_F_contig116:28273..287091622927671.0527437-CDS-E-fasciculatus_F_contig116:28273..28709Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig116 28274..28709 +
1695995643.7104335-CDS-E-fasciculatus_F_contig116:28273..287091695995643.7104335-CDS-E-fasciculatus_F_contig116:28273..28709Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig116 28274..28709 +
1622927671.0718615-CDS-E-fasciculatus_F_contig116:28936..289641622927671.0718615-CDS-E-fasciculatus_F_contig116:28936..28964Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig116 28937..28964 +
1695995643.7200868-CDS-E-fasciculatus_F_contig116:28936..289641695995643.7200868-CDS-E-fasciculatus_F_contig116:28936..28964Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig116 28937..28964 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig116.1280.1prot_E-fasciculatus_F_contig116.1280.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig116 27432..28964 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig116.1280.1

>prot_E-fasciculatus_F_contig116.1280.1 ID=prot_E-fasciculatus_F_contig116.1280.1|Name=mRNA_E-fasciculatus_F_contig116.1280.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=322bp
MQVLVRDDLADALIQTASSTLRNAATSNVNASADGVAPMTTNGASATKSS
FPSTWSPGSSIQLMPPKLSDTTDRSLFRRARLAVFDPHGYRHQRGLRRPL
FYKSGYLSCTKCNGMTFIDASALRTILELKSLVDLGKVRPENLPPCVGCG
ETAGLRVGAHDFLSLIEGGKEALARRRRLERIAAKMLQRAFRRHLHIQWR
KAEIVRQRTIQLLRYRSAQVIQAMLRGRLGRRVFETEKWLGVVKKAHRLL
IKHALDHYPHRKRVFWYKNEAEERQLYADYRMLVRRTGFRPPRIVVEQNI
REIGEINSVLDAVDESAGERS*
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mRNA from alignment at E-fasciculatus_F_contig116:27423..30536+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig116.1280.1 ID=mRNA_E-fasciculatus_F_contig116.1280.1|Name=mRNA_E-fasciculatus_F_contig116.1280.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3114bp|location=Sequence derived from alignment at E-fasciculatus_F_contig116:27423..30536+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAAGCCGTGATGCAGGTGCTTGTGCGGGATGATCTTGCGGATGCTCTGAT CCAGACGGCTTCGTCGACCCTTCGCAATGCCGCCACCTCCAACGTGAACG CATCTGCCGACGGTGTAGCCCCCATGACTACCAATGGCGCTAGCGCGACC AAGAGCTCCTTTCCATCAACCTGGTCACCCGGCAGCAGCATTCAGCTCAT GCCGCCGAAACTGAGCGACACGACCGACAGAAGCTTGTTCCGAAGGGCGC GACTAGCAGTGTTCGACCCGCATGGGTATCGACATCAGAGAGGCCTCCGA CGGCCGCTTTTCTACAAGAGCGGGTACCTCAGCTGCACGAAGTGCAACGG CATGACCTTTATCGATGCCTCGGCCCTGCGAACCATCCTCGAGCTTAAGA GTTTGGTGGATTTGGGGAAGGTCCGGCCCGAGAATCTCCCTCCGTGCGTC GGGTGTGGCGAGACGGCCGGCTTGCGGGTTGGGGCACATGACTTCTTGAG TCTCATCGAAGGTGAGAGCGCTGCCGCAACCAACAGGAAAGCGTTGTACT CCAAGATTCAAAATTTCAAATCACAGCTGTGTTGATGCCTCTGATTTGCT ATGCACGTGTGAGGGTGCACATATATTCGGGTTTGCGGTATCACAACCTC ACCCCCACGAGGCAACAAGCGGTACTGCTGTAGATTATTATAACACAGCA ATACTGTACCCTCACAAGCTTTTCAACGCGAACATCAGACATGCAGATAG CTGGAAACATACATAGTGTTGACGATGCATGCGGGTATATTCTACACCAT ATATGTTCACGGCGTTTGTCCACAAACCGGGTTGCGTGCTGTGTCTGCCA GGAGGGAAGGAGGCGCTAGCGCGCCGACGGCGGTTGGAGCGAATCGCCGC AAAAATGCTTCAGCGTGCTTTCCGACGACACCTACACATTCAGTGGAGGA AAGCCGAAATCGTACGGCAGCGCACCATACAGTTGCTACGGTATCGCTCG GCGCAGGTTATCCAAGCGATGTTGCGGGGGCGTTTGGGCCGTCGCGTGTT CGAAACGGAGAAGTGGCTCGGGGTAGTGAAGAAAGCCCACCGGTTGCTCA TCAAGCACGCCTTGGACCACTACCCACATCGAAAAAGGGTGTTCTGGTAC AAGAACGAAGCGGAAGAGCGACAACTGTACGCTGACTACCGAATGCTGGT GCGGAGGACAGGTTTTCGGCCGCCACGTATAGTGGTGGAACAAAATATCC GCGAGATTGGTGAGATCAATTCCGTTCTTGACGCTGTGTTGGTTCCTCTT GTGGGTTGACTGCTCTCCCCTTCAACCGCAGCAAAATGGCACTCTATGTA GGTACAGTTTCAATCCCTAGATATTCAGATATTCCCTTAGGCGTGAAACA AAGCACGCCTTCACGAATACGTCTTTGTAGAAAACATTCATGGTGACTCC ACCTTTGTTACTCTCTGCCCAACATCGAAACTCATACACGCCGGGACATA CATATCGTTCGCAGCGACGAGAGTGCTGGAGAGAGAAGCTGAGCTGGTGG GGCGCATCCAGGCGCGGTGGAGGGGACTCAGCGTTAGGCGCTATTTGGTC GTGTTCCGTAGGGAGCTGAGGAGACATCGAGAGGTGCGCGCAAGCATGGT CTTCCGTCTTCAGCGCAGCGTGAGAGGTTGGTCTCACCGCAAGCGCTTTG CCAAGCTCAAGTCCCAAAAAGCAGAGCAGAACATGCTGGCGGACTATCTG GCCGCGAGAGCAACCAAGAACGACAACGACGCGTGCACGGAGGGCATGTC AAGGCTCCGCAGAGCTTACGTTACGGAAAGGTATGGCCAGGCCTCGCCGC CGTCCGCTTGACGTCGGGTACGGATTGCTTGATGACCTGAGAGGTCACTT GCAAAGTCTCCATGCAATGTCGGTGTCTTCGTTGAGGACAAGGCTAGGCC GATGATTCCCAGAACGTGTTGGCATGGCATGCCGCAGTACACCGGCGGCA TCTATCATAATCGACCGATTTCCCCCTCAAGATACGCTCTCACTGTTCGG AGGAATGCTTCGGCGAAATGCAGGCAGGAAGAGCTGACGGCACGTTTGAT GGGGCACTCCAACCCGAAGCTAGCAGGTGGCTTGAAGATGAAGGCGTTCT TCGAAAGTCCTTACGGAGACGACGTGGTATCGGGACTGATGAACCATCAA GTATGTACATGGAAAGCGTTCTACAATGAAGTATTGGCGTTCATCACGTG CACGCCAAGAACCCTCGAAGAAAATATTCAAGTGTTGTCAGGCGCTGTAT GGCCAAATAGTATTTGCATTGTATTTGGGGATGAACGGCAGAAAATAGCC ATCTAAGTGCTCCGTTCATGCCGGTAATGCCAGTACCGAGGGTACAATGA TACCAACAAATCGACATCGATTTTTAACAGTGGCAGATTGAACCCTCGAC CTTTGTCTAAGACACATGTGTGTATGTGGTTCTCCCTCGCGGAACTGATT CTAGATTGGGTTCTGACCCACGGCAGGTCTGGCAAGCAAGGCAACAGAAG AAAGATCTCGAGCAAAAGGATCTCGAACGACAAAAGAGGGCCGAGTGGGT GCGCCTCAAACAACTCGAGGACCCCCAACTGGCCATGTGAGAGTACAGTA GTGTGGCTTGTGTTGCCAGTTCCACGGCACTACTGCCGTAGCTTTGTGTG CTGAGAATCACATTGCCTACGTTACATCATCGTGTATCTTTATTGCCGCC GTCCGTCGTGTAGGGTGTCCATGTGCATGCATACTGCTGTTGTTCAGAAC AACACAATTGATGGCCCGCGGTGACGGTCGAAACGCTATAAAAAATTGCA ATGTCTTTCTATTCCGCAAGGCGACGACAAGGCTCAACATCTGCCAGTAC GTGCCGGAGGAGCTTTTGCCACCACCCACGCATCCTTGTTGTTTCTCGCC TTCCTGCCAGGTATTTCAAAGAAGAGATGACAGCGAGGAACGTGTACGTG ATCAACAAGCTGCGTTGGGACCGGCGTGCTCTCAAAAATGTCGCGTCCGC TTTAAAAGACTACAACCAAACCGGGGGGAGAAAGTACGACTTCCCAGAAA CCGTGAGTGCCAGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig116:27423..30536+

>mRNA_E-fasciculatus_F_contig116.1280.1 ID=mRNA_E-fasciculatus_F_contig116.1280.1|Name=mRNA_E-fasciculatus_F_contig116.1280.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1932bp|location=Sequence derived from alignment at E-fasciculatus_F_contig116:27423..30536+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGGTGCTTGTGCGGGATGATCTTGCGGATGCTCTGATCCAGACGGC
TTCGTCGACCCTTCGCAATGCCGCCACCTCCAACGTGAACGCATCTGCCG
ACGGTGTAGCCCCCATGACTACCAATGGCGCTAGCGCGACCAAGAGCTCC
TTTCCATCAACCTGGTCACCCGGCAGCAGCATTCAGCTCATGCCGCCGAA
ACTGAGCGACACGACCGACAGAAGCTTGTTCCGAAGGGCGCGACTAGCAG
TGTTCGACCCGCATGGGTATCGACATCAGAGAGGCCTCCGACGGCCGCTT
TTCTACAAGAGCGGGTACCTCAGCTGCACGAAGTGCAACGGCATGACCTT
TATCGATGCCTCGGCCCTGCGAACCATCCTCGAGCTTAAGAGTTTGGTGG
ATTTGGGGAAGGTCCGGCCCGAGAATCTCCCTCCGTGCGTCGGGTGTGGC
GAGACGGCCGGCTTGCGGGTTGGGGCACATGACTTCTTGAGTCTCATCGA
AGATGCAGGTGCTTGTGCGGGATGATCTTGCGGATGCTCTGATCCAGACG
GCTTCGTCGACCCTTCGCAATGCCGCCACCTCCAACGTGAACGCATCTGC
CGACGGTGTAGCCCCCATGACTACCAATGGCGCTAGCGCGACCAAGAGCT
CCTTTCCATCAACCTGGTCACCCGGCAGCAGCATTCAGCTCATGCCGCCG
AAACTGAGCGACACGACCGACAGAAGCTTGTTCCGAAGGGCGCGACTAGC
AGTGTTCGACCCGCATGGGTATCGACATCAGAGAGGCCTCCGACGGCCGC
TTTTCTACAAGAGCGGGTACCTCAGCTGCACGAAGTGCAACGGCATGACC
TTTATCGATGCCTCGGCCCTGCGAACCATCCTCGAGCTTAAGAGTTTGGT
GGATTTGGGGAAGGTCCGGCCCGAGAATCTCCCTCCGTGCGTCGGGTGTG
GCGAGACGGCCGGCTTGCGGGTTGGGGCACATGACTTCTTGAGTCTCATC
GAAGGAGGGAAGGAGGCGCTAGCGCGCCGACGGCGGTTGGAGCGAATCGC
CGCAAAAATGCTTCAGCGTGCTTTCCGACGACACCTACACATTCAGTGGA
GGAAAGCCGAAATCGTACGGCAGCGCACCATACAGTTGCTACGGTATCGC
TCGGCGCAGGTTATCCAAGCGATGTTGCGGGGGCGTTTGGGCCGTCGCGT
GTTCGAAACGGAGAAGTGGCTCGGGGTAGTGAAGAAAGCCCACCGGTTGC
TCATCAAGCACGCCTTGGACCACTACCCACATCGAAAAAGGGTGTTCTGG
TACAAGAACGAAGCGGAAGAGCGACAACTGTACGCTGACTACCGAATGCT
GGTGCGGAGGACAGGTTTTCGGCCGCCACGTATAGTGGTGGAACAAAATA
TCCGCGAGATTGGTGAGATCAATTCCGTTCTTGACGCTGTGAGGGAAGGA
GGCGCTAGCGCGCCGACGGCGGTTGGAGCGAATCGCCGCAAAAATGCTTC
AGCGTGCTTTCCGACGACACCTACACATTCAGTGGAGGAAAGCCGAAATC
GTACGGCAGCGCACCATACAGTTGCTACGGTATCGCTCGGCGCAGGTTAT
CCAAGCGATGTTGCGGGGGCGTTTGGGCCGTCGCGTGTTCGAAACGGAGA
AGTGGCTCGGGGTAGTGAAGAAAGCCCACCGGTTGCTCATCAAGCACGCC
TTGGACCACTACCCACATCGAAAAAGGGTGTTCTGGTACAAGAACGAAGC
GGAAGAGCGACAACTGTACGCTGACTACCGAATGCTGGTGCGGAGGACAG
GTTTTCGGCCGCCACGTATAGTGGTGGAACAAAATATCCGCGAGATTGGT
GAGATCAATTCCGTTCTTGACGCTGTCGACGAGAGTGCTGGAGAGAGAAG
CTGACGACGAGAGTGCTGGAGAGAGAAGCTGA
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