mRNA_E-fasciculatus_F_contig1157.1255.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: D8LI66_ECTSI (Similar to HemK methyltransferase family member 1 isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI66_ECTSI) HSP 1 Score: 397 bits (1020), Expect = 2.760e-135 Identity = 213/247 (86.23%), Postives = 215/247 (87.04%), Query Frame = 1
Query: 1 MLSKQQQQGVDT-VRLSRTAWKEFRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXDGTDSSGDESGECGMRFLDVGSGTGALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHAAVAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEALPRDVADHEDSVALDGG 738
M SKQQQQGVDT VRLSRTAW EFRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAA A DG DSS S E GMRFLDVGSGTGALGLALLGELPSGARCVAVD QESAVRLSRRNAARTGL+ARYSCFHAAVAELAP E GS TTPAIDRP VEK G DLD DGSFDF+VSNPPYIPTRDME LPRDVADHEDSVALDGG
Sbjct: 1 MQSKQQQQGVDTAVRLSRTAWTEFRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAADAPAAGG----DGADSS--SSDESGMRFLDVGSGTGALGLALLGELPSGARCVAVDTQESAVRLSRRNAARTGLQARYSCFHAAVAELAPSEKGSVTTPAIDRPPRSSVEKGGREDLDLDGSFDFVVSNPPYIPTRDMEGLPRDVADHEDSVALDGG 241
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: A0A6H5KUS7_9PHAE (Methyltranfer_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS7_9PHAE) HSP 1 Score: 400 bits (1029), Expect = 7.230e-134 Identity = 224/252 (88.89%), Postives = 228/252 (90.48%), Query Frame = 1
Query: 1 MLSKQQQQGVD-TVRLSRTAWKEFRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXD-----GTDSSGDESGECGMRFLDVGSGTGALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHAAVAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEALPRDVADHEDSVALDGG 738
M SKQQQQGVD VRLS TAW EFRRLCVLRAVQHVPVQYLVGEWDFYGL+LEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAA XXXXXXXXX SSGDESG MRFLDVGSGTGALGLALLGELP GARCVAVD QESAVRLSRRNAARTGL+ARYSCFHAAVAELAPRENGSATTPAIDRPQS GVEK G GDLDFDGSFDF+VSNPPYIPTRDM +LPRDVADHEDSVALDGG
Sbjct: 186 MQSKQQQQGVDKAVRLSTTAWTEFRRLCVLRAVQHVPVQYLVGEWDFYGLSLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAGXXXXXXXXXXXXXXXADSSSGDESG---MRFLDVGSGTGALGLALLGELPLGARCVAVDTQESAVRLSRRNAARTGLQARYSCFHAAVAELAPRENGSATTPAIDRPQSSGVEKGGRGDLDFDGSFDFVVSNPPYIPTRDMGSLPRDVADHEDSVALDGG 434
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: A0A0G4EHU7_VITBC (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHU7_VITBC) HSP 1 Score: 142 bits (359), Expect = 2.040e-36 Identity = 95/238 (39.92%), Postives = 123/238 (51.68%), Query Frame = 1
Query: 40 RLSRTAWKEFRR-----LCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXDGTDSSGDESGECGMRFLDVGSGTGALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHAAVAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEALPRDVADHEDSVALDGG 738
RL RTA E +R LC R ++ +PVQY+VG WDF+ ++++ PP LIPRPETEELVE+IL+ +R V GE + LDVG+GTGA+GLALL +LP+ ARC A+D+ AVRL+ NAA L RY C A + P + D +D IVSNPPYIPT ++ L +V D+EDS ALDGG
Sbjct: 38 RLVRTALTEEQRRLFDSLCAKR-LRRMPVQYVVGRWDFHHISVKCEPPVLIPRPETEELVELILEEVRRSVR------------------------------GERALHLLDVGAGTGAIGLALLKQLPT-ARCTAIDLSPHAVRLASANAATLSLADRYKCLQADMLTFEPPD---------------------------DERYDLIVSNPPYIPTAEIPTLQPEVRDYEDSGALDGG 216
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: A0A835YWT7_9STRA (PrmC_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWT7_9STRA) HSP 1 Score: 143 bits (360), Expect = 6.250e-34 Identity = 98/238 (41.18%), Postives = 119/238 (50.00%), Query Frame = 1
Query: 64 EFRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXDGTDSSGDESGECGMRFLDVGSGTG-------------ALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHAAVAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEALPRDVADHEDSVALDGG 738
EF RLC LRA + +P+QY++GEWD++ L L + PP LIPRPETE+LVE +L WLR +R A +RFLDVGSGTG A+GLALL LP GA CVA D+ AVRLS NA++ G+ RY+C + + L P G G+F FIVSNPPYIP RDM L DV ED AL GG
Sbjct: 1111 EFERLCRLRATR-MPLQYIMGEWDWHDLALLVRPPVLIPRPETEDLVERVLDWLR-----RTCPERERTA-----------------------LRFLDVGSGTGEHQSEPSVEQCCSAIGLALLNRLP-GAMCVACDVSADAVRLSLENASKVGVADRYACVLSPASSLQPPPPG--------------------------GAFHFIVSNPPYIPQRDMAGLDEDVRGFEDWGALCGG 1292
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: A0A8J2SRL1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRL1_9STRA) HSP 1 Score: 135 bits (341), Expect = 7.630e-34 Identity = 81/217 (37.33%), Postives = 106/217 (48.85%), Query Frame = 1
Query: 88 RAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXDGTDSSGDESGECGMRFLDVGSGTGALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHAAVAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEALPRDVADHEDSVALDGG 738
R + PVQY+VG W F+ + LE+ PPTLIPRPETEELV+++L W G F DVG G+G LGLALL +LP G+ C A+D+ + AV LS+RNA + GL + Y + +L +G+FDFIVSNPPYIP++D+ L +V D ED ALDGG
Sbjct: 80 RRLTREPVQYIVGTWAFHDVELELEPPTLIPRPETEELVDLVLDWW-----------------------------------GSSTAHFADVGCGSGCLGLALLNKLPEGSSCTAIDISQEAVSLSKRNAKKLGLSSVYDASRQSADQL-------------------------------EGAFDFIVSNPPYIPSQDLRGLDAEVVDFEDPRALDGG 230
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: A0A0M0JRK9_9EUKA (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JRK9_9EUKA) HSP 1 Score: 136 bits (342), Expect = 1.460e-33 Identity = 99/236 (41.95%), Postives = 118/236 (50.00%), Query Frame = 1
Query: 43 LSRTAWKEFRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXDGTDSSGDESGECGMRFLDVGSGTGALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHA----AVAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEALPRDVADHEDSVALDGG 738
L A + F +C R + VPVQY++G+WDF+ LTLEM PP LIPRPETEELVE +L+ L D R G S D + LDVG GTGA+GLALL LP+ ARCV +D+ +A LS+ NA R GL ARY A +LAPR FD IVSNPPYIP DM L +VA HED+ AL GG
Sbjct: 77 LDEAAARAFECMCK-RRFERVPVQYILGDWDFHDLTLEMRPPVLIPRPETEELVEHVLEALGDD-------HRTGGR----------GARRSSD------IDILDVGCGTGAIGLALLNRLPN-ARCVGIDICPTAHALSKANAERCGLSARYESLLVDGGIAACDLAPRR------------------------------FDVIVSNPPYIPRADMATLEPEVAWHEDAGALCGG 257
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: A0A7S4NLJ6_9EUKA (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NLJ6_9EUKA) HSP 1 Score: 132 bits (331), Expect = 5.760e-32 Identity = 91/224 (40.62%), Postives = 116/224 (51.79%), Query Frame = 1
Query: 67 FRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXDGTDSSGDESGECGMRFLDVGSGTGALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHAAVAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEALPRDVADHEDSVALDGG 738
F +C R ++ VPVQY++G+WDF+ LTL +APP LIPRPETE+LVE++L+ A RAA +RFLDVG G+GA+GLALL ++ A CV +D++ A L+ RNA GL ARY A GG+ SG+ G+FD IVSNPPYIP DM L +V DHED AL GG
Sbjct: 99 FEDMCGQR-LRRVPVQYILGDWDFHELTLSVAPPVLIPRPETEQLVELVLE--------AHGAARAAP------------------------LRFLDVGCGSGAIGLALLHKMQR-ADCVGLDIRSEATELATRNAEALGLAARYRAVLVA----------------------GGIAHFPSGES---GAFDVIVSNPPYIPKADMATLEPEVVDHEDEGALCGG 263
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: A0A7S0IWB7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IWB7_9EUKA) HSP 1 Score: 122 bits (307), Expect = 2.950e-30 Identity = 80/208 (38.46%), Postives = 104/208 (50.00%), Query Frame = 1
Query: 67 FRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXDGTDSSGDESGECGMRFLDVGSGTGALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHAAVAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEAL 690
F R C LR ++ +PVQY++G+WDF+ LTL++ P LIPRPETEELVE++L LR + G G ++ LDVG GTGA+GLAL+ ++P ARCV +D+ E AV L++RNAA L RY + E A + R FD IVSNPPYIP DM L
Sbjct: 13 FERFCELR-MRRMPVQYILGDWDFHELTLQVEAPILIPRPETEELVELVLSALRRE---------------------------GGQTRGGRPLKILDVGCGTGAIGLALINKMPE-ARCVGIDISEHAVSLAQRNAASLRLSDRYEASCIGITEYA-------RNTIVPR-------------------FDVIVSNPPYIPQADMSTL 165
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: R1FNS3_EMIHU (HemK methyltransferase family member 1 n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FNS3_EMIHU) HSP 1 Score: 122 bits (306), Expect = 2.300e-29 Identity = 94/221 (42.53%), Postives = 110/221 (49.77%), Query Frame = 1
Query: 76 LCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXDGTDSSGDESGECGMRFLDVGSGTGALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHAAVAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEALPRDVADHEDSVALDGG 738
+C R + PVQY++G+WDF LTLE+ PP LIPRPETE LVE++ A A AAA FLDVG GTGA+GLALL LP+ ARCV +D+ SA L+ RNA GL RYS AAV + G A RP D FD +VSNPPYIP D E L +VA HED AL GG
Sbjct: 1 MCARRLARE-PVQYILGDWDFMDLTLEVRPPVLIPRPETEGLVELV----------AQAHGDAAA--------------------------FLDVGCGTGAIGLALLSRLPA-ARCVGIDVSASAAALAARNAELCGLDDRYSA--AAV------DGGVAAW----RPS--------------DQRFDVVVSNPPYIPRADYEQLEPEVAGHEDERALCGG 157
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Match: A0A7S4C115_CHRCT (Peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C115_CHRCT) HSP 1 Score: 126 bits (317), Expect = 8.180e-29 Identity = 91/230 (39.57%), Postives = 114/230 (49.57%), Query Frame = 1
Query: 55 AWKEFRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDRAAAAXXXXXXXXXDGTDSSGDESGECGMRFLDVGSGTGALGLALLGELPSGARCVAVDMQESAVRLSRRNAARTGLRARYSCFHAA--VAELAPRENGSATTPAIDRPQSGGVEKDGSGDLDFDGSFDFIVSNPPYIPTRDMEALPRDVADHEDSVALDGG 738
A + F R C R + +PVQY++G+WDF+ LTL + PP LIPRPETEELVE++L A R++ A + LDVG G+GA+GLALL ++ A C+ +D+ E AV L+RRNA L RYS A VA A E TP FD IVSNPPYIP DME+L +VA ED AL GG
Sbjct: 234 ASETFERFCTAR-LGRMPVQYILGDWDFHELTLLVEPPVLIPRPETEELVELVL-----------AAQRSSPA--------------------SAALNLLDVGCGSGAIGLALLSQMDD-ATCIGIDISEKAVDLARRNAISLDLEGRYSAVLDAGGVASFAESEQ----TPR----------------------FDVIVSNPPYIPQADMESLEPEVAGFEDRRALCGG 404 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1157.1255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1157.1255.1 >prot_E-fasciculatus_F_contig1157.1255.1 ID=prot_E-fasciculatus_F_contig1157.1255.1|Name=mRNA_E-fasciculatus_F_contig1157.1255.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=275bp MLSKQQQQGVDTVRLSRTAWKEFRRLCVLRAVQHVPVQYLVGEWDFYGLTback to top mRNA from alignment at E-fasciculatus_F_contig1157:12070..13186- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1157.1255.1 ID=mRNA_E-fasciculatus_F_contig1157.1255.1|Name=mRNA_E-fasciculatus_F_contig1157.1255.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1117bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1157:12070..13186- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1157:12070..13186- >mRNA_E-fasciculatus_F_contig1157.1255.1 ID=mRNA_E-fasciculatus_F_contig1157.1255.1|Name=mRNA_E-fasciculatus_F_contig1157.1255.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1650bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1157:12070..13186- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |