mRNA_E-fasciculatus_F_contig11567.1251.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11567.1251.1 vs. uniprot
Match: D7G622_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G622_ECTSI) HSP 1 Score: 395 bits (1015), Expect = 6.660e-133 Identity = 232/315 (73.65%), Postives = 251/315 (79.68%), Query Frame = 1
Query: 244 MHVTAVANAVINIFYFLLVLLAKAHWHQTSVLVVILNQITVSVCGFLTIRMWIYTNDARLMRGSSTMLRISAVLEEKTGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAATFILLIVFADATFWIFGRALLRAINASLENSRKRALESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGEGRVASELGDGELQAAKSKVKWAMAFCAHMSLQGYAILLFSIFSKYGTSVPLVLFGVQMAIVPLVWHAFNIQLHARRSRASAIGRRSTGV--GGRRYVIPAVGSG 1182
MHVTAVANAV+++FYFLLVLL KA WH+ SVLVVILNQITVSVCGFLT+RMWIYTNDARLM+ SSTMLRIS+VLEEK GQRLSYLVLSTGPVVATVLALLGRTEAAAKLVA TFI+LIVF D TFWIFGRALLRAI+ASL+NSR RA++S+ XXXXXXXXXX WGGEGR SELGDGELQAAK KV+WAM FCAHMSLQGYAILLFSIFSKYGTS+PL+LFGVQM IVPLVWHAFNIQLHA RSR SAIGRRS+GV GGRRYV+PAVG+G
Sbjct: 1 MHVTAVANAVVSLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDARLMQASSTMLRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVFTDTTFWIFGRALLRAIDASLQNSRMRAMKSVFEEDRRESVLATLGGTEADEERGRRGSGXXXXXXXXXXSSSRTWSSVGPRRRGSW-WGGEGRDESELGDGELQAAKRKVRWAMGFCAHMSLQGYAILLFSIFSKYGTSMPLILFGVQMTIVPLVWHAFNIQLHAGRSRGSAIGRRSSGVDRGGRRYVVPAVGTG 314
BLAST of mRNA_E-fasciculatus_F_contig11567.1251.1 vs. uniprot
Match: A0A6H5LCQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ2_9PHAE) HSP 1 Score: 368 bits (944), Expect = 1.030e-121 Identity = 210/315 (66.67%), Postives = 231/315 (73.33%), Query Frame = 1
Query: 244 MHVTAVANAVINIFYFLLVLLAKAHWHQTSVLVVILNQITVSVCGFLTIRMWIYTNDARLMRGSSTMLRISAVLEEKTGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAATFILLIVFADATFWIFGRALLRAINASLENSRKRALESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGEGRVASELGDGELQAAKSKVKWAMAFCAHMSLQGYAILLFSIFSKYGTSVPLVLFGVQMAIVPLVWHAFNIQLHARRSRASAIGRRSTGV--GGRRYVIPAVGSG 1182
MHVTAVANA I++FYFLLVLL +A WH+ SVLV+ILNQITVSVCGF T+RMWIYTND RLM+GS T+LRISA LE+K GQRLSYLVLSTGPVVATVLALLGRTEAAAKLVA TFI+LIV AD +FWIFGRALLRAI+ASL+NSRKRA+ES+ WGGEGR SELG GELQAAK KV+W M FCA MSL+GYAILL SI SKYGT+VPL+LFGVQMAI PLVWHAFNIQLHA RSR SAIGRRS+ V GGRRYV+PAVG G
Sbjct: 1 MHVTAVANAAISLFYFLLVLLVEARWHEISVLVMILNQITVSVCGFSTVRMWIYTNDTRLMQGSITILRISAALEKKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVVADTSFWIFGRALLRAIDASLQNSRKRAMESVFGKDRRESVLAVLGGTEADEEGGRRGSSISAGEGGGRLSRKWSSGRLQRRGSW---WGGEGRDESELGGGELQAAKRKVRWVMVFCALMSLEGYAILLLSILSKYGTTVPLILFGVQMAIFPLVWHAFNIQLHAGRSRGSAIGRRSSSVDQGGRRYVVPAVGGG 312
BLAST of mRNA_E-fasciculatus_F_contig11567.1251.1 vs. uniprot
Match: D8LCB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB1_ECTSI) HSP 1 Score: 187 bits (476), Expect = 2.990e-52 Identity = 125/366 (34.15%), Postives = 186/366 (50.82%), Query Frame = 1
Query: 25 CSCICEDDSWADHNILGSDSCVPIKAHVIFGSVGIVLSVAVLSQALYQLHLQLKFHAQQFSVSTTPAECCRKNMHVTAVANAVINIFYFLLVLLAKAH--WHQTSVLVVILNQITVSVCGFLTIRMWIYTNDARLMRGSSTMLRISAVLEEKTGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAATFILLIVFADATFWIFGRALLRAINASLENSRKRALESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGEGRVASELGDGEL-QAAKSKVKWAMAFCAHMSLQGYAILLFSIFSKYGTSVPLVLFGVQMAIVPLVWHAFNIQLHARRSRA 1113
C C C +++W+++NI+G SCVP KAHV+FG+VG++++ L + YQL+ Q+K H Q + S + E CR+ +H+ + +AVI + YF +VLL + W T + ++ Q +++ G LT+RMWIY ND RL R + +L IS LE TG +S V+ GP +ATVLA+ +AA K+ A F+ LIVF D G ALLR +N L N+ +R+ S VA +G L +AA+ +K+A+ FC +SL A L+ +F+ YG + PL+ FG+ P VW FN+QLHA RSR+
Sbjct: 25 CRCACGNETWSEYNIVGLPSCVPSKAHVVFGTVGVLMATTSLCHSAYQLYRQVKHHRQVITASISSVEKCRRWLHIVVIIHAVIGLCYFGMVLLLDSERLWMST-IFMLSAGQTMMTIGGILTVRMWIYCNDPRLTRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAVAKSLQAAGKVSAVAFLGLIVFCDFIILKSGTALLRTVNKYLRNTVERSERS------------------------------------------------------------NSIVAGTVGSLPLLKAARKNIKFALYFCLVVSLLT-AFLMICLFTTYGATAPLIFFGIPYGFSPPVWFVFNVQLHAGRSRS 328
BLAST of mRNA_E-fasciculatus_F_contig11567.1251.1 vs. uniprot
Match: A0A6H5KM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM92_9PHAE) HSP 1 Score: 177 bits (448), Expect = 7.810e-48 Identity = 126/395 (31.90%), Postives = 187/395 (47.34%), Query Frame = 1
Query: 25 CSCICEDDSWADHNILGSDSCVPIKAHVIFGSVGIVLSVAVLSQALYQLHLQLKFHAQQFSVSTTPAECCRKNMHVTAVANAVINIFYFLLVLLAKAH--WHQTSVLVVILNQITVSVCGFLTIRMWIY------------------------------TNDARLMRGSSTMLRISAVLEEKTGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAATFILLIVFADATFWIFGRALLRAINASLENSRKRALESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGEGRVASELGDGEL-QAAKSKVKWAMAFCAHMSLQGYAILLFSIFSKYGTSVPLVLFGVQMAIVPLVWHAFNIQLHARRSR 1110
C C C D++W+++NILG SCVP KAH +FG+VG+ +++ L A YQL+ Q+K+H Q + ST+ E CR+ +H+ + +AVI + YF +VLL + W T + I QI +++ G LT+RMW+Y +ND RL+R + +L IS LE TG +S V+ GP VATVLA +AA + A F+ LIVF D ALL+ +N L NS R+ +S +A +G +L +AA+ +K+A+ FC +SL ++I++ +F+ YG + PL+ G+ P VW FNIQLHA RSR
Sbjct: 25 CRCACGDETWSEYNILGLPSCVPSKAHAVFGAVGVFVTMTSLGHAAYQLYRQVKYHRQFMAASTSSVEKCRRWLHIVVIIHAVIGLCYFGMVLLLDSERLWMSTIFMFGI-GQIMMTIGGILTVRMWLYCLTSDEQRSPLQLNRFPYVSPLRNHILFLASNDPRLIRETPELLMISEALERPTGLFVSNTVMCVGPAVATVLAAAKSLQAACMVSAVAFLGLIVFCDFIILKTATALLQTVNKYLRNSVVRSEKS------------------------------------------------------------NSIMAGTVGSLQLLKAARKNIKFALYFCVVVSLLTFSIVMIGLFTTYGATAPLIFSGIPYGCSPPVWFVFNIQLHAGRSR 358 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11567.1251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11567.1251.1 >prot_E-fasciculatus_F_contig11567.1251.1 ID=prot_E-fasciculatus_F_contig11567.1251.1|Name=mRNA_E-fasciculatus_F_contig11567.1251.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=394bp MSDEDGTSCSCICEDDSWADHNILGSDSCVPIKAHVIFGSVGIVLSVAVLback to top mRNA from alignment at E-fasciculatus_F_contig11567:2..3699- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11567.1251.1 ID=mRNA_E-fasciculatus_F_contig11567.1251.1|Name=mRNA_E-fasciculatus_F_contig11567.1251.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3698bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11567:2..3699- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11567:2..3699- >mRNA_E-fasciculatus_F_contig11567.1251.1 ID=mRNA_E-fasciculatus_F_contig11567.1251.1|Name=mRNA_E-fasciculatus_F_contig11567.1251.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2364bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11567:2..3699- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |