mRNA_E-fasciculatus_F_contig11512.1221.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: D7FP57_ECTSI (Calcium-dependent protein kinase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP57_ECTSI) HSP 1 Score: 224 bits (570), Expect = 9.920e-71 Identity = 115/143 (80.42%), Postives = 124/143 (86.71%), Query Frame = 1
Query: 28 LHTEQGAAAAQPVDGGLGTTFVRRHLEDAYAKAVFAQLALDPERGLLRMGDELGAGGHGTVHQAVDTTTGAFYAVKTANDEEGKACLKEEAKNLIRLGPHEGIVAVEAILDTEDSIAIAMELGQTDLKRAMFDKEHSAADVLR 456
+ TEQG AA PVD GLGT FVRR LE+A AKAVFAQ ALDPERGLLRM DELG GGHGTVHQAVD TTG YAVKTANDEEGKACLKEEAKNLIRLGPHEG+V VEAILD +DS+AIAMELGQ+DL+RAMF EH+ AD+LR
Sbjct: 158 MGTEQGGAAVPPVDEGLGTAFVRRRLENACAKAVFAQRALDPERGLLRMSDELGTGGHGTVHQAVDPTTGKRYAVKTANDEEGKACLKEEAKNLIRLGPHEGVVEVEAILDKDDSLAIAMELGQSDLQRAMFSNEHAPADLLR 300
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: D7FX16_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX16_ECTSI) HSP 1 Score: 229 bits (583), Expect = 2.710e-67 Identity = 119/151 (78.81%), Postives = 131/151 (86.75%), Query Frame = 1
Query: 4 TATAEGEGLHTEQGAAAAQPVDGGLGTTFVRRHLEDAYAKAVFAQLALDPERGLLRMGDELGAGGHGTVHQAVDTTTGAFYAVKTANDEEGKACLKEEAKNLIRLGPHEGIVAVEAILDTEDSIAIAMELGQTDLKRAMFDKEHSAADVLR 456
TATAEGEGL TEQG A A+PV GLGT FVRR LEDA AKAVFAQ ALDPERGLL+MGDELGAGGHGTV +AVD TTG YAVKTANDEEG ACLKEEAKNL RLGPHEGIV V+A+LD +S++IAMELGQTDL+RAMFD +H+ AD+LR
Sbjct: 147 TATAEGEGLGTEQGVADARPVGDGLGTAFVRRQLEDACAKAVFAQHALDPERGLLQMGDELGAGGHGTVRKAVDPTTGKTYAVKTANDEEGMACLKEEAKNLTRLGPHEGIVEVKAVLDKGESVSIAMELGQTDLQRAMFDNDHTPADLLR 297
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: A0A6H5JJE3_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJE3_9PHAE) HSP 1 Score: 211 bits (536), Expect = 1.570e-60 Identity = 109/147 (74.15%), Postives = 124/147 (84.35%), Query Frame = 1
Query: 16 EGEGLHTEQGAAAAQPVDGGLGTTFVRRHLEDAYAKAVFAQLALDPERGLLRMGDELGAGGHGTVHQAVDTTTGAFYAVKTANDEEGKACLKEEAKNLIRLGPHEGIVAVEAILDTEDSIAIAMELGQTDLKRAMFDKEHSAADVLR 456
EG GL TEQG A A+PV LGT+FVRR LEDA AKAVFAQ ALDP RGLL+M DELGAGGHGTV +AVD TTG YAVKTANDEEG ACLKEEAKNL RLGPHEG+V V+A+LD ++S++IAMELGQTDL+RAMF +H+ AD+LR
Sbjct: 208 EGGGLGTEQGVADARPVGDDLGTSFVRRQLEDACAKAVFAQHALDPGRGLLQMDDELGAGGHGTVRKAVDPTTGKTYAVKTANDEEGMACLKEEAKNLTRLGPHEGVVEVKAVLDKDESVSIAMELGQTDLQRAMFGNDHTPADLLR 354
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: D7FX33_ECTSI (Serine/threonine protein kinase with WD40 repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX33_ECTSI) HSP 1 Score: 188 bits (478), Expect = 9.870e-53 Identity = 98/139 (70.50%), Postives = 111/139 (79.86%), Query Frame = 1
Query: 37 EQGAAAAQPVDGGLGTTFVRRHLEDAYAKAVFAQLALDPERGLLRMGDELGAGGHGTVHQAVDTTTGAFYAVKTANDEEGKACLKEEAKNLIRLGPHEGIVAVEAILDTEDSIAIAMELGQTDLKRAMFDKEHSAADVL 453
EQG A P LG FVRR LEDA AKAVFAQ ALDPERGLL+M DELGAGGHGTV +AVD TTG +AVKTANDEEGK CLK EAKNLIRLG HEG+V V AILD ++S+AIAMELGQTDL+ AMFD++ + ++L
Sbjct: 185 EQGVVAVPPRSDDLGAAFVRRQLEDACAKAVFAQRALDPERGLLQMADELGAGGHGTVRKAVDPTTGKTFAVKTANDEEGKTCLKHEAKNLIRLGTHEGVVEVMAILDKDNSMAIAMELGQTDLQHAMFDQKRTVVELL 323
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: A0A6H5KAZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ4_9PHAE) HSP 1 Score: 103 bits (256), Expect = 2.620e-25 Identity = 55/92 (59.78%), Postives = 66/92 (71.74%), Query Frame = 1
Query: 37 EQGAAAAQPVDGGLGTTFVRRHLEDAYAKAVFAQLALDPERGLLRMGDELGAGGHGTVHQAVDTTTGAFYAVKTANDEEGKACLKEEAKNLI 312
+QG A A PVD LGT F R L+DA AKAVFAQ ALDPE GLL +G ELGAGGHG+ +A D T G YA+KTA + K CL++EA+N+I
Sbjct: 51 QQGVAGAAPVD--LGTAFARGQLQDACAKAVFAQRALDPEHGLLEVGPELGAGGHGSDSRARDPTPGVLYAMKTALPDSSKVCLRQEARNII 140
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: M4FGF8_BRARP (Protein kinase domain-containing protein n=10 Tax=Brassiceae TaxID=981071 RepID=M4FGF8_BRARP) HSP 1 Score: 57.4 bits (137), Expect = 7.110e-7 Identity = 35/97 (36.08%), Postives = 51/97 (52.58%), Query Frame = 1
Query: 169 RMGDELGAGGHGTVHQAVDTTTGAFYAVKTAN-----DEEGKACLKEEAKNLIRLGPHEGIVAVEAILDTEDSIAIAMELGQTDLKRAMFDKEHSAA 444
+M DE+G G GT+ + T FYA KT N D + C+ E + + L PH IV + + +TED++AI MEL D ++D+ SAA
Sbjct: 12 QMCDEIGRGRFGTITRCFSPATKEFYACKTINKRVLVDALDRECITTEPRIMAMLPPHPNIVTIHDLFETEDTLAIVMEL--VDPPTTIYDRLISAA 106
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: UPI00053C2685 (phosphoenolpyruvate carboxylase kinase 2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C2685) HSP 1 Score: 56.2 bits (134), Expect = 1.810e-6 Identity = 35/100 (35.00%), Postives = 52/100 (52.00%), Query Frame = 1
Query: 169 RMGDELGAGGHGTVHQAVDTTTGAFYAVKTAN-----DEEGKACLKEEAKNLIRLGPHEGIVAVEAILDTEDSIAIAMELGQTDLKRAMFDKEHSAADVL 453
++ DE+ +G GT+ + T FYA KT + D + CL+ E K + L PH +V + I +TEDS+AI MEL D ++D+ SA L
Sbjct: 12 QLSDEIASGRFGTITRCFSPVTSEFYACKTIDKRVLTDALDRECLETEPKIMALLPPHRNVVRIYDIFETEDSLAIVMEL--VDPSVTIYDRLISAGRKL 109
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: R0G6W4_9BRAS (Protein kinase domain-containing protein n=1 Tax=Capsella rubella TaxID=81985 RepID=R0G6W4_9BRAS) HSP 1 Score: 54.3 bits (129), Expect = 8.630e-6 Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 178 DELGAGGHGTVHQAVDTTTGAFYAVKTAN-----DEEGKACLKEEAKNLIRLGPHEGIVAVEAILDTEDSIAIAMELGQTDLKRAMFDK 429
DE+G G GT+ + +T FYA KT + D + C++ E + + L PH+ IV + + +TEDS+AI MEL D ++D+
Sbjct: 15 DEIGRGRFGTITRCFSPSTKQFYACKTIDKRVLVDALDRECIETEPRIMAMLPPHQNIVRIFDLFETEDSLAIVMEL--VDPPMTIYDR 101
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: PPCK2_ARATH (Phosphoenolpyruvate carboxylase kinase 2 n=12 Tax=Brassicaceae TaxID=3700 RepID=PPCK2_ARATH) HSP 1 Score: 53.1 bits (126), Expect = 2.210e-5 Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 1
Query: 178 DELGAGGHGTVHQAVDTTTGAFYAVKTAN-----DEEGKACLKEEAKNLIRLGPHEGIVAVEAILDTEDSIAIAMELGQTDLKRAMFDKEHSAADVL 453
DE+G G GT+ + T FYA KT + D + C++ E + + L PH I+ + + +TEDS+AI MEL D ++D+ SA L
Sbjct: 15 DEIGRGRFGTITRCFSPATKEFYACKTIDKRVLIDALDRECIETEPRIMAMLPPHPNIIRIFDLYETEDSLAIVMEL--VDPPMTIYDRLISAGGRL 109
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Match: UPI0002C30B90 (phosphoenolpyruvate carboxylase kinase 1-like n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C30B90) HSP 1 Score: 51.6 bits (122), Expect = 7.600e-5 Identity = 30/89 (33.71%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 178 DELGAGGHGTVHQAVDTTTGAFYAVKTAN-----DEEGKACLKEEAKNLIRLGPHEGIVAVEAILDTEDSIAIAMELGQTDLKRAMFDK 429
+E+G G GT+ +A T+ A AVK + DE +AC+ +E K + L PH I+ + + +TEDS+AI ++L + ++DK
Sbjct: 13 EEIGRGRFGTILRAFCPTSAASVAVKIIDKTLLADETDRACIDKEPKIMSLLSPHPNILQIHNVFETEDSMAIVLDLCSPE---TLYDK 98 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11512.1221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11512.1221.1 >prot_E-fasciculatus_F_contig11512.1221.1 ID=prot_E-fasciculatus_F_contig11512.1221.1|Name=mRNA_E-fasciculatus_F_contig11512.1221.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=153bp ATATAEGEGLHTEQGAAAAQPVDGGLGTTFVRRHLEDAYAKAVFAQLALDback to top mRNA from alignment at E-fasciculatus_F_contig11512:2874..4416- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11512.1221.1 ID=mRNA_E-fasciculatus_F_contig11512.1221.1|Name=mRNA_E-fasciculatus_F_contig11512.1221.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1543bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11512:2874..4416- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11512:2874..4416- >mRNA_E-fasciculatus_F_contig11512.1221.1 ID=mRNA_E-fasciculatus_F_contig11512.1221.1|Name=mRNA_E-fasciculatus_F_contig11512.1221.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=918bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11512:2874..4416- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |