mRNA_E-fasciculatus_F_contig1150.1213.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: A0A6H5K6N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N9_9PHAE) HSP 1 Score: 416 bits (1069), Expect = 1.270e-132 Identity = 216/270 (80.00%), Postives = 235/270 (87.04%), Query Frame = 1
Query: 2113 MTMYTLTLARRCRTGWQASGSLIGALASSRNRLLFTDDRATRPAPST--RIAGASMALKAAARPSSPAWNTYPGARLSSLAIPNEIAATGSPVSSSGNSN-SDFTVVEDGTEKFLVAARVLEANKVLFARVEGLVTGVKTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDTAEQPYLHVTVRAPQIHPNELLTIDYNAMEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQKEYIDGGATGSPPLTGAVKTWAEEHSIV*IES*R 2913
M M+TLTLARRCRTGWQASGSLIGAL+SSR+RLLFTDDRATRP P+ RIAGASMAL A A+PSSP+ YPGA SSLA PNE A GSPVSSS SD+TVV+DGTEKF+VAARVLEAN+VLF+RVEGLVTGVKTRHSVQ+SKERHLE G +L LMNHSCEPNCQLEVVDTAEQPYL VTVRAP++ PNE L IDYNAMEIDMTCPFDCQCGA +C+GWVSGFSNLS AEQ+EYIDGGATGSPPLTGAVKTWAEEH I +S R
Sbjct: 1 MAMHTLTLARRCRTGWQASGSLIGALSSSRSRLLFTDDRATRPGPTPPPRIAGASMALTADAKPSSPS-PVYPGAGFSSLARPNEFVAAGSPVSSSXXXXXSDYTVVQDGTEKFVVAARVLEANQVLFSRVEGLVTGVKTRHSVQLSKERHLETGSDLALMNHSCEPNCQLEVVDTAEQPYLRVTVRAPRVQPNEALEIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGIACRDSQR 269
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: A0A6H5JKC4_9PHAE (Post-SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC4_9PHAE) HSP 1 Score: 344 bits (882), Expect = 2.260e-104 Identity = 202/356 (56.74%), Postives = 219/356 (61.52%), Query Frame = 1
Query: 2119 MYTLTLARRCRTGWQASGSLIGALASSRNRLLFTDDRATRPA--------PSTRIAGASMALKAAARPSSPAWNTYPGARLSSLAIPNEIAATGS-----------------------PVSSSGNS----------------NSDFTVVEDGTEKFLVAARVLEANKVLFARVEGLVTGVKTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDTA--------------------------------------------------EQPYLHVTVRAPQIHPNELLTIDYNAMEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQKEYIDGGATGSPPLTGAVKTWAEEHSIV 2895
M+TLTL RRC TGWQASGSLI AL SSRNRLLFTDD ATRP PSTR+ GASM K+ SS AW+TY GA LSSLA PN G PV S S + DFTVV+DGTEKFLVAARVLEAN+ +FARVEGLVTGV TRHSVQVSKERHLEA +L+ +NHSCEPNCQLEVVD A EQPYL VTVRAP+I PNELLTIDYNAMEIDM+CPFDCQCGA +C+GWVSGFSNLS AEQKEYIDGGAT SPPLTGAVKTWA+E+ IV
Sbjct: 1 MHTLTLVRRCPTGWQASGSLIRALTSSRNRLLFTDDLATRPGGEEHGGPPPSTRVGGASMVPKSPVTSSSTAWSTYRGAWLSSLAGPNNDYVAGDVAVMVSGERGGGIGGKGNTLAPFPVGFSSRSXXXXXXXXXXXXXXXXSLDFTVVKDGTEKFLVAARVLEANQAIFARVEGLVTGVSTRHSVQVSKERHLEARCDLMFLNHSCEPNCQLEVVDAADHWVGWKSWANPNPIGIRKGVIEILKCSTLEKYCSNNRRAHAMNTFCNPQEQPYLRVTVRAPRIRPNELLTIDYNAMEIDMSCPFDCQCGAVRCRGWVSGFSNLSRAEQKEYIDGGATKSPPLTGAVKTWAQENDIV 356
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: D8LGU6_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU6_ECTSI) HSP 1 Score: 207 bits (526), Expect = 9.240e-59 Identity = 93/104 (89.42%), Postives = 99/104 (95.19%), Query Frame = 1
Query: 2584 MNHSCEPNCQLEVVDTAEQPYLHVTVRAPQIHPNELLTIDYNAMEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQKEYIDGGATGSPPLTGAVKTWAEEHSIV 2895
MNHSCEPNCQLEVVDTAEQPYL VTVRAP++ P+ELLTIDYNAMEIDMTCPFDCQCGA +C+GWVSGFSNLS AEQ+EYIDGGATGSPPLTGAVKTWAEEH IV
Sbjct: 1 MNHSCEPNCQLEVVDTAEQPYLRVTVRAPRVQPSELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGIV 104
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: D8LGU7_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU7_ECTSI) HSP 1 Score: 108 bits (269), Expect = 1.190e-24 Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 1
Query: 2713 MEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQKEYIDGGATGSPPLTGAVKTWAEEHSIV 2895
MEIDM+CPF+CQCGA +C+G VSGFSNLS EQKEYI+GGAT SP LTGAVK WAEEH+IV
Sbjct: 1 MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNIV 61
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: A0A3M6VG35_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VG35_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.600e-14 Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 1
Query: 2494 VEGLVTGVKTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDT-AEQPYLHVTVRAPQIHPNELLTIDYNAMEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQKEYI 2823
V G + + TR +VQ+++ +H+ G L +NHSC PN ++EVV+T A+ ++ +T I E LT DY+ E DM FDC+CGA KC+G + G LS E K +
Sbjct: 81 VSGNLYSMPTRFTVQLTRNKHMHFTGGLEFINHSCNPNTRIEVVETEAKVSFVAIT----SIKKGEHLTFDYSTSEWDMDEKFDCRCGALKCRGHIGGAKYLSDDEVKTRL 187
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: W5WEZ3_9PSEU (Uncharacterized protein n=1 Tax=Kutzneria albida DSM 43870 TaxID=1449976 RepID=W5WEZ3_9PSEU) HSP 1 Score: 79.0 bits (193), Expect = 4.410e-13 Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = 1
Query: 2404 NSDFTVVEDGTEKFLVAARVLEANKVLFARVEGLVTGVKTRHSVQVSKERHLEA----GGNLVL-------MNHSCEPNCQLEVVDTAEQPYLHVTVRAPQIHPNELLTIDYNAMEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQK 2814
NS VV G E +VA+R LF V G +TGV TR+SVQ+ + H++ G V+ NHSCEPN +L D + L R +I T Y E +M PFDC+CG+A+C+G +SGF +LS+ ++
Sbjct: 5 NSGVAVVRSGGEYTIVASRPFATGSRLF-EVNGEITGVPTRYSVQIGPDSHIDLPDRYGTEEVMDRFFWRFTNHSCEPNVRL---DGRQFFALRPIERWQEI------TFHYGTTEYEMAEPFDCRCGSAQCEGRISGFRHLSAQSRR 142
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: A7T2D6_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7T2D6_NEMVE) HSP 1 Score: 77.8 bits (190), Expect = 9.580e-13 Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 1
Query: 2524 RHSVQVSKERHLEAGGNLVLMNHSCEPNCQLE-------VVDTAEQPYLHVTVRAPQIHPNELLTIDYNAMEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQKEYIDGGATGSPPLTGAVK 2868
RH+VQVSK++H+ G + NH+C P + E V ++ H+ V I+ E +T +Y E +M PF+CQCGA +C G V GF +L++ +Q+E + A SP + +K
Sbjct: 45 RHTVQVSKDKHIMPEGKVKFTNHACSPTAEFEFKARDGVVAPEGKELSWHL-VATRDINKGEEITFNYTLTEYEMDAPFECQCGAKQCLGRVQGFKHLTTEQQQEIM---AKVSPAIKEIIK 162
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: A0A423EZ84_9PSED (SET domain-containing protein-lysine N-methyltransferase n=7 Tax=Pseudomonas TaxID=286 RepID=A0A423EZ84_9PSED) HSP 1 Score: 76.3 bits (186), Expect = 4.190e-12 Identity = 43/125 (34.40%), Postives = 65/125 (52.00%), Query Frame = 1
Query: 2449 VAARVLEANKVLFARVEGLVTGVKTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDTAEQPYLHVTVRAPQIHPNELLTIDYNAMEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQKEYI 2823
+ AR ++V A+V G + H++Q+S HL L +HSC+PN L++ YL V +IHP ELLT+DY E + F CQCG C+GW++G L +AE + ++
Sbjct: 47 IRARTAFDSRVCIAKVSGYALSERRLHTLQLSSRTHLYDCWFSGLFSHSCKPNVFLDL------HYLEVWALC-EIHPGELLTMDYATTEDVLFRQFACQCGELNCRGWITGHDELLNAEGQAFM 164
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: A0A3L7SDW3_9BACT (SET domain-containing protein-lysine N-methyltransferase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7SDW3_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 1.140e-10 Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 2518 KTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDTAEQPYLHVTVRAPQ-IHPNELLTIDYNAMEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQKEY 2820
++R ++QV+ + H+E G VLMNHSC+PNC + + + + +RA + I E +TIDY+ E ++T C+CG+ KC+G V+G+ +LSS + Y
Sbjct: 387 RSRRTIQVAADMHVEPDGVAVLMNHSCDPNCGVVIRSGVRE----IEIRALRPIAAGEEITIDYDTFEYEVTLGGACRCGSLKCRGRVAGYKHLSSDVKARY 484
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Match: UPI00195C5168 (SET domain-containing protein-lysine N-methyltransferase n=1 Tax=Lentzea nigeriaca TaxID=1128665 RepID=UPI00195C5168) HSP 1 Score: 70.9 bits (172), Expect = 2.400e-10 Identity = 47/147 (31.97%), Postives = 69/147 (46.94%), Query Frame = 1
Query: 2407 SDFTVVEDGTEKFLVAARVLEANKVLFARVEGLVTGVKTRHSVQVSKERHLEAGGNLVL-----------MNHSCEPNCQLEVVDTAEQPYLHVTVRAPQIHPNELLTIDYNAMEIDMTCPFDCQCGAAKCKGWVSGFSNLSSAEQK 2814
S VV E LVA R + ++LF VEG VT V TR++VQV ++ H++ MNHSC+P + + + + +T +YN E DM PF C+CG+ +C G V GF +LS E++
Sbjct: 11 SAVAVVRADGEYRLVANRPITEGELLFT-VEGEVTTVPTRYTVQVGRDTHVDVPAEYDFEAILDRFYWRFMNHSCDPTVFVRG---------RAVISLKPVEFGQDITFNYNTTEFDMAEPFACRCGSDRCSGRVQGFRHLSGEERR 147 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1150.1213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1150.1213.1 >prot_E-fasciculatus_F_contig1150.1213.1 ID=prot_E-fasciculatus_F_contig1150.1213.1|Name=mRNA_E-fasciculatus_F_contig1150.1213.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=262bp MTMYTLTLARRCRTGWQASGSLIGALASSRNRLLFTDDRATRPAPSTRIAback to top mRNA from alignment at E-fasciculatus_F_contig1150:13921..18419- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1150.1213.1 ID=mRNA_E-fasciculatus_F_contig1150.1213.1|Name=mRNA_E-fasciculatus_F_contig1150.1213.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4499bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1150:13921..18419- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1150:13921..18419- >mRNA_E-fasciculatus_F_contig1150.1213.1 ID=mRNA_E-fasciculatus_F_contig1150.1213.1|Name=mRNA_E-fasciculatus_F_contig1150.1213.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1150:13921..18419- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |