mRNA_E-fasciculatus_F_contig115.1206.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 494 bits (1272), Expect = 4.480e-176 Identity = 242/265 (91.32%), Postives = 250/265 (94.34%), Query Frame = 1
Query: 1 MDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPPTESTGLAVFAELWGNFALRQFALAAVSPSAVKEWAAQGQARKGASMWYLVKDYLTRGGIDEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLGINEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVFNDQVAKFGIE 795
MDKSGASGARRVATE+WRKDELVFDTVQWRRGDGFAADVMAS WKLLHGGCVESLRNHKGRSCKW+TIFRHPIARLLSAYDHCLGAPKDP+CPPTESTGLA FAELWGNFA+RQFALAAVSPSAVKEWAAQ QAR G SMWYLVK+YL RGGI EDEVL S LEPVKGLLSTQYAAVGIAQEL+TTMVLFSKALS EGLDW+SSWATLGINEEDKQDSEYDITES FRQAL NPRI SALRLDMSLYEHAVHVF DQVA+FGIE
Sbjct: 1 MDKSGASGARRVATEQWRKDELVFDTVQWRRGDGFAADVMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPPTESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 488 bits (1255), Expect = 3.020e-169 Identity = 240/265 (90.57%), Postives = 247/265 (93.21%), Query Frame = 1
Query: 1 MDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPPTESTGLAVFAELWGNFALRQFALAAVSPSAVKEWAAQGQARKGASMWYLVKDYLTRGGIDEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLGINEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVFNDQVAKFGIE 795
MDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHK RSCKWLTIFRHPIARLLSAY HCL APKDP+CPPTESTGL VFAELWGNFA+RQFAL +VSPSAVKEWAAQ QAR G SMWYLVK+YL RGGI EDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALS EGLDW+SSWATLGINEE KQDSEYDI ES FRQAL NPRI SALRLDMSLYEHA+HVF DQVA+FGIE
Sbjct: 279 MDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPTESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 164 bits (415), Expect = 1.330e-45 Identity = 106/308 (34.42%), Postives = 158/308 (51.30%), Query Frame = 1
Query: 1 MDKSGASGARRVATERWRKDELV----FDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKG---RSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPPT------ESTGLAVFAELWGNFALRQFALAAVSPSAVK----EWAAQG-----QARKGASMWYLVKDYLTRGGIDEDE-------------------VLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLGINEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVFNDQVAKFGIEEG 801
M+K+G S + + W K + V +D+ QW G FA D + L+ G E LR G R CKW TIFRHPI RL+SAY +C P+D +C + T L FAE WG+F LRQFALA V P + ++ A G ++ WY +K YL + +DE E + +L+PV+ LL+ +YAAVG+ ++ ET+++LF++AL G DW ++ ++G D + E+ ++ +PR+ L LD+ LY++AV V N QV K+G+ EG
Sbjct: 1 MNKAGGSTVKYMLAP-WTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQ-LDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKK---NSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGLGEG 303
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 163 bits (413), Expect = 2.460e-44 Identity = 101/299 (33.78%), Postives = 151/299 (50.50%), Query Frame = 1
Query: 1 MDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMAS-----HWKLLHGGCVESLR-------NHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPP----TESTGLAVFAELWGNFALRQFALAAVSPSAVKEW-------AAQGQARKGASM---WYLVKDYLT-RGGIDEDEV-----LESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLG-INEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVFNDQVAKFGIEE 798
+ K+G + +R+ + W + +D+ QW++G G+A V AS W GG +E+LR + + C+W T+FRHP++RL+SAY +C P D +C + + L FA WGNFALRQFAL VS VK++ A G + + WY++K +L R G+ +D LE M PV LL YA VGI ++ T+ LF AL G+ W + G +N D+ + + +QAL++P I L LD+ LY AV +FN Q +GI +
Sbjct: 94 LQKAGGTTVKRLLFDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLN----VDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGIAQ 388
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 145 bits (367), Expect = 4.270e-38 Identity = 92/287 (32.06%), Postives = 140/287 (48.78%), Query Frame = 1
Query: 1 MDKSGASGARRVA----TERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPPT----ESTGLAVFAELWGNFALRQFALAAVSPS------AVKEWAAQGQARKGASM--WYLVKDYLTR-------GGIDEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLGINEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVFNDQVAKFGI 792
M+KSG R++ TE+ L FD ++W G +A + + +GG E LR + R CKW T+FRHP++R++SAY +C A D +C L FAE WGN+ LRQFALA++ V E+ Q + + WY K YL G + L L + LST+YAAVGI +E + +M LF++ L+ DW + G +++ S+++ + + A +P + + LD+ LY+HA+ V QVA GI
Sbjct: 58 MNKSGGMTVRKMIMPFLTEKGVSTAL-FDDIEWSSGRSYAETFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSG--KKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.100e-35 Identity = 93/295 (31.53%), Postives = 140/295 (47.46%), Query Frame = 1
Query: 1 MDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAAD-----VMASHWKLLHGGCVESLRNHK--GRSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPP----TESTGLAVFAELWGNFALRQFALAAVSPSAVKEWAAQGQARKGASMWYLVKDYLTR-----GGI---------------DEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLGINEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVFNDQVAKFGI 792
+ K G S + + +RW ++D+++W+ GD F+A + W ++ GG E+LR + G C++ T+FRHPIAR++SAY +C D C + L FA+ WGNFALRQFAL V V+E Y +K YL R GG+ D L +L+P L+ Y AVGI ++ TT+ LF L ++W +A G + D + + +I T +QA + + +RLD+ LYEHAV VF+ Q G+
Sbjct: 183 LQKCGGSTVKDLLEDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE--------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIE---TLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 141 bits (355), Expect = 2.140e-35 Identity = 95/302 (31.46%), Postives = 147/302 (48.68%), Query Frame = 1
Query: 1 MDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAAD-----VMASHWKLLHGGCVESLRNHK--GRSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPP----TESTGLAVFAELWGNFALRQFALAAVSPSAVKEWAAQGQAR-------KGASMWYLVKDYLTRG-----GI-----------DEDEVLES----MLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLGINEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVFNDQVAKFGI 792
+ K G S + + + ++D+ QW+ GD +A+ W ++ GG E+LR + C++ T+FRHPIAR++SAY +C D C + L FA+ WGNFA+RQFAL V V+E+ +A+ K + WY +K YL R G+ D LE+ +L+P L+ + Y AVGI ++ TT+ LF AL G+ W + +A G D ++ ES T +QA + + +RLD+ LYEHAV VF++Q +G+
Sbjct: 162 LQKCGGSTVKYMLRRSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRL---ESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 115 bits (288), Expect = 9.250e-27 Identity = 85/288 (29.51%), Postives = 136/288 (47.22%), Query Frame = 1
Query: 1 MDKSGASGARRVATERWRKDELV---FDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKG-RSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPPT----ESTGLAVFAELWGNFALRQFALAAVSPSAVKEWAAQGQARKGASMWYLVKDYL-----------TRGGIDEDEVLESM-----LEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLGINEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVFNDQVAKFGI 792
M+K+G + RR+ + F Q+ GD ++ L+ G E LR + CKW T+ RHPIARL+SA+++C P D +C E + FAE WGN + QFALA + + + + WY K Y T I +V +++ L+PV+ LL ++YAAVGI ++ ET+M+LF AL G +W S+ A+ ++ D+ ++ + +P + L LD+ LYEHA V Q++++G+
Sbjct: 43 MNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVK------SPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKNDLLVAS-----MTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 115 bits (288), Expect = 9.600e-27 Identity = 77/256 (30.08%), Postives = 122/256 (47.66%), Query Frame = 1
Query: 85 WRRGDGFAADVMASHWKLLHGGCVESLRNHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPPT----ESTGLAVFAELWGNFALRQFALAAVSPSAVKEWAAQGQARKGASMWYLVKDYL--------------TRGGIDEDEV--LESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLGINEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVFNDQVAKFGI 792
+ RGD D++ L+ GG E LR + CKW T+ RHPIARL+SA+ +C G +D +C E + FA+ WGN+AL QFAL V + A W+ K Y R DE + + +L+PV+ LL + YAAVGI + + +M+LF AL G +W + A+L + + + + A A+ +P + + LD+ LYE+A + +Q+ ++ +
Sbjct: 74 YARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFA------EEVDAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNK----IVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Match: F0Y323_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y323_AURAN) HSP 1 Score: 66.2 bits (160), Expect = 1.250e-8 Identity = 64/245 (26.12%), Postives = 95/245 (38.78%), Query Frame = 1
Query: 52 RKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPICPPTESTGLAV-----FAELWGNFALRQFALAA-VSPSAVKEWAAQGQARKGA-SMWYLVKDYLTRGGIDEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSTEGLDWASSWATLGINEEDKQDSEYDITESATFRQALANPRITSALRLDMSLYEHAVHVF 765
R D+ FD R D D A + L+GG S G SC W+T FR P+ARL+SA HC DP+C + A A WGNF LA + +A + + R GA +W + L G E + L V L + V + + E +M L + WA G + ++ +A A A+P + + D ++Y A+ +F
Sbjct: 671 RCDDANFDWASKRCPD---LDPAAGANRWLNGGYALS-HAAAGPSCAWITNFREPVARLVSAQFHCTLHDHDPLCGDRPAAWFAAANASRMARYWGNFGFTNLLLAPRFAGTAAPRRDMRARRRDGAPKVWQRWRAALGGGDDPRTEAGAANLRRVVAALGDLFDVVVVVERWEDSMALLDCRVPLRDGTWAD---LAGAHLNTHGSEQHGDRAAAALAVARADPAVAEEIAADTAIYSAALALF 908 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig115.1206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig115.1206.1 >prot_E-fasciculatus_F_contig115.1206.1 ID=prot_E-fasciculatus_F_contig115.1206.1|Name=mRNA_E-fasciculatus_F_contig115.1206.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=268bp MDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGback to top mRNA from alignment at E-fasciculatus_F_contig115:1566..2369- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig115.1206.1 ID=mRNA_E-fasciculatus_F_contig115.1206.1|Name=mRNA_E-fasciculatus_F_contig115.1206.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=804bp|location=Sequence derived from alignment at E-fasciculatus_F_contig115:1566..2369- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig115:1566..2369- >mRNA_E-fasciculatus_F_contig115.1206.1 ID=mRNA_E-fasciculatus_F_contig115.1206.1|Name=mRNA_E-fasciculatus_F_contig115.1206.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1608bp|location=Sequence derived from alignment at E-fasciculatus_F_contig115:1566..2369- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |