mRNA_E-fasciculatus_F_contig11471.1187.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11471.1187.1 vs. uniprot
Match: D7G627_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G627_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 2.850e-170 Identity = 245/252 (97.22%), Postives = 248/252 (98.41%), Query Frame = 1
Query: 1 MKSAVATAVFLSHLASLANAAYVAQMDIASCADLQSAAGALSGGDIEGVLVESEITCDDWTTVEINQNKLKLTGQATTFTSVRFVVADGAILRVDTAVEFTGDQETRQGDGLAPAFLEAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVESDSMQHGGCIYNEGYVRFEGTFTADACRVGSTAEKYPGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGD 756
MKSAVATAVFLSHLAS NAAYVAQMDIASCADLQSAAGALSGG+IEGVLVESEITCDDWTTVEI+QNKLKLTGQATTFTSVRFVVADGAILRVDTAVEFTGDQE RQGDGLAPAFLEAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVE D+MQHGGCIYNEGYVRFEGTFTADACRVGSTAEKYPGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGD
Sbjct: 1 MKSAVATAVFLSHLASFVNAAYVAQMDIASCADLQSAAGALSGGNIEGVLVESEITCDDWTTVEISQNKLKLTGQATTFTSVRFVVADGAILRVDTAVEFTGDQERRQGDGLAPAFLEAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFEGTFTADACRVGSTAEKYPGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGD 252
BLAST of mRNA_E-fasciculatus_F_contig11471.1187.1 vs. uniprot
Match: A0A6H5L171_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L171_9PHAE) HSP 1 Score: 279 bits (713), Expect = 5.400e-91 Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 1
Query: 352 EAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVESDSMQHGGCIYNEGYVRFEGTFTADACRVGSTAEKYPGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGD 756
+AVNGGVLNVAPEGYARFLDSVKMYSVGVNTVE D+MQHGGCIYNEGYVRFEGTFTADACRVGSTAEKYPGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGD
Sbjct: 12 QAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFEGTFTADACRVGSTAEKYPGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGD 146
BLAST of mRNA_E-fasciculatus_F_contig11471.1187.1 vs. uniprot
Match: D8LU56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU56_ECTSI) HSP 1 Score: 274 bits (701), Expect = 6.930e-88 Identity = 147/254 (57.87%), Postives = 180/254 (70.87%), Query Frame = 1
Query: 1 MKSAVATAVFLSHLASLANAAYVAQMDIASCADLQSAAGALSGGDIEGVLVESEITCDDWTTVEINQNKLKLTGQATTFTSVRFVVADGAILRVDTAVEFTGDQETRQGDGLAPAFLEAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVESDSMQHGGCIYNEGYVRFEGTFTADACRVGS--TAEKYPGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGD 756
MK+ ++ L+H + NA YVA +DIASCADL +AA ALSGGDIE ++E++I CD+WTTVE+ QNKLK G TFTS RFVVA GA+LR D + TGDQ +AVNGG+LNVA G ARFLDSV M VGV +V ++M HGGC+YNEG +RFEGTF+AD C+ S TA PG+GG LWNGP K+VFKEAVEM NC G++T + R GL+GGA+YT+GK+SFYEDA FTDNE D
Sbjct: 1 MKAVISALGLLAH-SCFTNAVYVATIDIASCADLLTAADALSGGDIEANIMEADIACDEWTTVEVGQNKLKFVGSGATFTSARFVVAAGAVLRADVPLVLTGDQ------------TQAVNGGLLNVADGGKARFLDSVAMNDVGVLSVSEEAMVHGGCVYNEGLIRFEGTFSADGCKTVSSDTASVIPGDGGGLWNGPGGKIVFKEAVEMKNC-GERTGLRSWRSQGLDGGAIYTDGKVSFYEDAQFTDNEAD 240
BLAST of mRNA_E-fasciculatus_F_contig11471.1187.1 vs. uniprot
Match: D7FSQ1_ECTSI (Adhesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ1_ECTSI) HSP 1 Score: 224 bits (570), Expect = 4.790e-68 Identity = 126/235 (53.62%), Postives = 157/235 (66.81%), Query Frame = 1
Query: 76 MDIASCADLQSAAGALSG-GDIEGVLVESEITCDDWTTVEINQNKLKLTGQ---ATTFTSVRFVVADGAILRVDTAVEFTGDQETRQGDGLAPAFLEAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVESDSMQHGGCIYNEGYVRFEGTFTADACRVGSTAEKY----PGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGD 756
MDI++CA+LQ+AA A + G++ G LVE EI CD+W +VEI +NKLKL G F VRFVV GAILRVD VEFTGD+ + V+GGVLNV G ARFL SV M +GV+TV+ M+HGGC+YN+GYVRFEG F A+ C ST E+Y GNG +WNG DAKVVFKEAVEM C G NG G +GGA+Y++G++SF+EDA+FT+NE D
Sbjct: 26 MDISNCAELQAAAEATATVGNVLGQLVEEEIFCDEWLSVEIPENKLKLDGDDGVTYKFDKVRFVVKSGAILRVDVPVEFTGDR------------TQVVHGGVLNVEEGGKARFLSSVSMDGIGVDTVDLADMKHGGCVYNQGYVRFEGEFYANGCETVSTIEEYRVAMAGNGAGIWNGKDAKVVFKEAVEMDFC-GNWPWTSNGAEPGSDGGAIYSDGEVSFFEDALFTNNEAD 247
BLAST of mRNA_E-fasciculatus_F_contig11471.1187.1 vs. uniprot
Match: A0A6H5L6W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6W4_9PHAE) HSP 1 Score: 101 bits (251), Expect = 5.950e-24 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 88 SCADLQSAAGALSGGDIEGVLVESEITCDDWTTVEINQNKLKLTGQATTFTSVRFVVADGAILRVDTAVEFTGDQ 312
SCADL +AA ALSGGDIE +VE++I CD+WTTVE+ QNKLK G TFTS RFVVA GA+LR D + FTGDQ
Sbjct: 4 SCADLLTAADALSGGDIEANIVEADIACDEWTTVEVGQNKLKFVGSGATFTSARFVVAAGAVLRADVPLVFTGDQ 78 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11471.1187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11471.1187.1 >prot_E-fasciculatus_F_contig11471.1187.1 ID=prot_E-fasciculatus_F_contig11471.1187.1|Name=mRNA_E-fasciculatus_F_contig11471.1187.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=252bp MKSAVATAVFLSHLASLANAAYVAQMDIASCADLQSAAGALSGGDIEGVLback to top mRNA from alignment at E-fasciculatus_F_contig11471:1869..4406+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11471.1187.1 ID=mRNA_E-fasciculatus_F_contig11471.1187.1|Name=mRNA_E-fasciculatus_F_contig11471.1187.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2538bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11471:1869..4406+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11471:1869..4406+ >mRNA_E-fasciculatus_F_contig11471.1187.1 ID=mRNA_E-fasciculatus_F_contig11471.1187.1|Name=mRNA_E-fasciculatus_F_contig11471.1187.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11471:1869..4406+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |