mRNA_E-fasciculatus_F_contig11465.1181.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11465.1181.1
Unique NamemRNA_E-fasciculatus_F_contig11465.1181.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Match: D7G334_ECTSI (Metallophos domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G334_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.040e-13
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 1 
Query:   40 RFGADYYSFWCGGVRGLVLNTHLWASPTANP 132
            RFGADYYSFWCGGVRGLVLNTHLWAS TANP
Sbjct:   43 RFGADYYSFWCGGVRGLVLNTHLWASRTANP 73
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BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Match: A0A6H5KQR8_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR8_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.960e-13
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1 
Query:   40 RFGADYYSFWCGGVRGLVLNTHLWASPTANP 132
            RFGADYYSFWCGG+RGLVL+THLWASPT+NP
Sbjct:   96 RFGADYYSFWCGGMRGLVLSTHLWASPTSNP 126
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BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Match: A0A835ZFF7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF7_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 3.050e-6
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 1 
Query:   19 TLGTRLTRFGADYYSFWCGGVRGLVLNTHLWASP 120
            T     T FGAD+YSFW GGVRGLV+NT L A+P
Sbjct:  790 TFRVNFTLFGADFYSFWWGGVRGLVINTPLLAAP 823
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BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Match: A0A7S1AVG8_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AVG8_NOCSC)

HSP 1 Score: 50.1 bits (118), Expect = 7.800e-6
Identity = 21/41 (51.22%), Postives = 26/41 (63.41%), Query Frame = 1 
Query:    1 HHPIPVTLGTRLTRFGADYYSFWCGGVRGLVLNTHLWASPT 123
            + P  V++      FG DY+SFWCGGVR LVLN+ LW   T
Sbjct:  150 NRPNAVSIKDYKETFGDDYFSFWCGGVRCLVLNSQLWKDDT 190
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BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Match: W7TNJ2_9STRA (Calcineurin-like phosphoesterase domain-containing protein 1 isoform a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNJ2_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 5.130e-5
Identity = 18/39 (46.15%), Postives = 28/39 (71.79%), Query Frame = 1 
Query:    7 PIPVTLGTRLTRFGADYYSFWCGGVRGLVLNTHLWASPT 123
            P P +L T    FG DY+ FW GG++GLV+N++L++ P+
Sbjct:  197 PTPSSLRTFQEDFGDDYFGFWVGGMKGLVINSNLYSDPS 235
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BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Match: A0A4D9CZB2_9STRA (Metallophos domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZB2_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 5.130e-5
Identity = 18/39 (46.15%), Postives = 28/39 (71.79%), Query Frame = 1 
Query:    7 PIPVTLGTRLTRFGADYYSFWCGGVRGLVLNTHLWASPT 123
            P P +L T    FG DY+ FW GG++GLV+N++L++ P+
Sbjct:  207 PTPSSLRTFQEDFGDDYFGFWVGGMKGLVINSNLYSDPS 245
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BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Match: A0A8J5JNZ4_HOMAM (Serine/threonine-protein phosphatase CPPED1-like 2 n=2 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5JNZ4_HOMAM)

HSP 1 Score: 47.4 bits (111), Expect = 6.340e-5
Identity = 19/42 (45.24%), Postives = 25/42 (59.52%), Query Frame = 1 
Query:    7 PIPVTLGTRLTRFGADYYSFWCGGVRGLVLNTHLWASPTANP 132
            P P T+    + FG DY+SFWCGGV  +VLNT  +   +  P
Sbjct:  128 PTPATVNRYTSSFGDDYFSFWCGGVFFIVLNTQFYEDASQCP 169
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BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Match: A0A8J5JUF0_HOMAM (Serine/threonine-protein phosphatase CPPED1-like 1 n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5JUF0_HOMAM)

HSP 1 Score: 47.4 bits (111), Expect = 6.990e-5
Identity = 19/42 (45.24%), Postives = 25/42 (59.52%), Query Frame = 1 
Query:    7 PIPVTLGTRLTRFGADYYSFWCGGVRGLVLNTHLWASPTANP 132
            P P T+    + FG DY+SFWCGGV  +VLNT  +   +  P
Sbjct:  128 PTPATVNRYTSSFGDDYFSFWCGGVFFIVLNTQFYEDASQCP 169
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BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Match: A0A6L2Q6M9_COPFO (Serine/threonine-protein phosphatase CPPED1 n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q6M9_COPFO)

HSP 1 Score: 47.0 bits (110), Expect = 9.520e-5
Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 1 
Query:    1 HHPIPVTLGTRLTRFGADYYSFWCGGVRGLVLNTHLWASPTANP 132
            + P   T+ +  + FG DY+SFWCGGVR LVLNT  +   +  P
Sbjct:  142 NQPTTETIESYKSSFGDDYFSFWCGGVRFLVLNTQYFEDASEVP 185
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11465.1181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G334_ECTSI1.040e-1396.77Metallophos domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KQR8_9PHAE1.960e-1390.32Metallophos domain-containing protein n=1 Tax=Ecto... [more]
A0A835ZFF7_9STRA3.050e-664.71Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S1AVG8_NOCSC7.800e-651.22Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
W7TNJ2_9STRA5.130e-546.15Calcineurin-like phosphoesterase domain-containing... [more]
A0A4D9CZB2_9STRA5.130e-546.15Metallophos domain-containing protein n=2 Tax=Mono... [more]
A0A8J5JNZ4_HOMAM6.340e-545.24Serine/threonine-protein phosphatase CPPED1-like 2... [more]
A0A8J5JUF0_HOMAM6.990e-545.24Serine/threonine-protein phosphatase CPPED1-like 1... [more]
A0A6L2Q6M9_COPFO9.520e-545.45Serine/threonine-protein phosphatase CPPED1 n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11465contigE-fasciculatus_F_contig11465:4137..4268 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score71.2
Seed ortholog evalue1.3e-10
Seed eggNOG ortholog2880.D7G334
Preferred nameCPPED1
KEGG koko:K18914,ko:K21814,ko:K22390
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0009987,GO:0012505,GO:0016020,GO:0016192,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0035578,GO:0036230,GO:0042119,GO:0042582,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071944,GO:0097708,GO:0099503
EggNOG free text desc.acid phosphatase activity
EggNOG OGsCOG1409@1,KOG1378@2759
EC1.18.1.6,3.1.3.16
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03029
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size132
Cds size132
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927659.3463948-CDS-E-fasciculatus_F_contig11465:4136..42681622927659.3463948-CDS-E-fasciculatus_F_contig11465:4136..4268Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11465 4137..4268 +
1695995638.157248-CDS-E-fasciculatus_F_contig11465:4136..42681695995638.157248-CDS-E-fasciculatus_F_contig11465:4136..4268Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11465 4137..4268 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11465.1181.1prot_E-fasciculatus_F_contig11465.1181.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11465 4137..4268 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11465.1181.1

>prot_E-fasciculatus_F_contig11465.1181.1 ID=prot_E-fasciculatus_F_contig11465.1181.1|Name=mRNA_E-fasciculatus_F_contig11465.1181.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=44bp
HHPIPVTLGTRLTRFGADYYSFWCGGVRGLVLNTHLWASPTANP
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mRNA from alignment at E-fasciculatus_F_contig11465:4137..4268+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11465.1181.1 ID=mRNA_E-fasciculatus_F_contig11465.1181.1|Name=mRNA_E-fasciculatus_F_contig11465.1181.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=132bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11465:4137..4268+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CACCACCCTATTCCCGTTACTCTGGGGACTCGACTGACTAGGTTCGGAGC
GGATTACTACTCCTTCTGGTGTGGAGGGGTGAGGGGACTGGTGCTCAATA
CGCATCTCTGGGCCAGCCCCACCGCCAATCCG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11465:4137..4268+

>mRNA_E-fasciculatus_F_contig11465.1181.1 ID=mRNA_E-fasciculatus_F_contig11465.1181.1|Name=mRNA_E-fasciculatus_F_contig11465.1181.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=264bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11465:4137..4268+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CACCACCCTATTCCCGTTACTCTGGGGACTCGACTGACTAGGTTCGGAGC
GGATTACTACTCCTTCTGGTGTGGAGGGGTGAGGGGACTGGTGCTCAATA
CGCATCTCTGGGCCAGCCCCACCGCCAATCCGCACCACCCTATTCCCGTT
ACTCTGGGGACTCGACTGACTAGGTTCGGAGCGGATTACTACTCCTTCTG
GTGTGGAGGGGTGAGGGGACTGGTGCTCAATACGCATCTCTGGGCCAGCC
CCACCGCCAATCCG
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