mRNA_E-fasciculatus_F_contig11401.1136.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: D8LIC2_ECTSI (Eukaryotic initiation factor eIF3 i subunit p36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC2_ECTSI) HSP 1 Score: 394 bits (1011), Expect = 3.300e-137 Identity = 193/198 (97.47%), Postives = 195/198 (98.48%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQVRLVQGRSSGV 597
RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIV+YADGTIRTFDP+DGTELEYAQV QGRSSGV
Sbjct: 2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVAYADGTIRTFDPFDGTELEYAQVGTRQGRSSGV 199
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: A0A6H5KMX5_9PHAE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX5_9PHAE) HSP 1 Score: 301 bits (771), Expect = 8.110e-100 Identity = 152/188 (80.85%), Postives = 155/188 (82.45%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQV 567
RPILLKGHERAITCVVYNNDGDLVFTA+KDQIPSLWYAKTGERIGTYQGHQG RELVVYNHMGPVRSV+FAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQL+KIA LEIDLPPKMKAT VVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQV
Sbjct: 2 RPILLKGHERAITCVVYNNDGDLVFTASKDQIPSLWYAKTGERIGTYQGHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELVVYNHMGPVRSVAFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLDKIASLEIDLPPKMKATTVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQV 189
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: A0A835ZF13_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF13_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.370e-78 Identity = 113/180 (62.78%), Postives = 139/180 (77.22%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDG 543
RPILLK HERAITCV+YN DGDLVFTAAKD +P++W A TGER+GTY GH GAVW+LS WDS +LSASADA+ R+WDVQTG LV Y H GPVRSV +AEGGQ+F + S PF DSPG IS+++ P DV Q +++A EI +P K K T+V+W ALN++++ S+ DGTIR FDP G
Sbjct: 2 RPILLKSHERAITCVIYNADGDLVFTAAKDNVPTVWRADTGERLGTYIGHSGAVWELSCRWDSKYLLSASADATVRLWDVQTGESLVSYPHRGPVRSVCWAEGGQKFVSASQPFMDSPGFISIYDTPSDVDPSQYQQVASREISIPNKEKCTEVLWSALNDRILASFEDGTIRVFDPETG 181
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: A0A6V2RRW4_HETAK (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RRW4_HETAK) HSP 1 Score: 218 bits (555), Expect = 3.830e-67 Identity = 104/183 (56.83%), Postives = 135/183 (73.77%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTEL 552
RPILLKGHER+IT V+YN DGDL+FTA+KD +PS+WY++ GERIGTY GH GAVWDL SWDSTR+LS SADA+ +MWDV+TG E +NH GPVRSV +AEG Q F +VSDPF +SP +SV++ PDD +Q+EKI LEI L K + N++++V+ DG+IR +D G ++
Sbjct: 2 RPILLKGHERSITKVLYNRDGDLIFTASKDSVPSVWYSENGERIGTYHGHVGAVWDLDCSWDSTRLLSGSADATVKMWDVETGVETCTFNHKGPVRSVRWAEGCQAFVSVSDPFMESPPFVSVYDCPDDADPEQIEKIPRLEIQL-DKKSTGGAHFIKENKEILVAMEDGSIRIYDAETGEQI 183
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: A0A7S1TX14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX14_9STRA) HSP 1 Score: 205 bits (521), Expect = 3.990e-63 Identity = 95/184 (51.63%), Postives = 135/184 (73.37%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELE 555
RPILLKGHERA+T V+YN DGDL+F+A+KD P++WYA TG R+GT+ GHQG VWDL V+ DS+R+L+ASADA+ R+WDV+TGREL Y H GPVR+V++AEGG+ FAT ++PF PG ++V+ P L I ++PP+++A ++VW N++L+++Y DG++ D G EL+
Sbjct: 30 RPILLKGHERALTKVMYNKDGDLLFSASKDNKPTVWYADTGVRLGTFNGHQGTVWDLDVTHDSSRLLTASADATVRLWDVRTGRELANYTHRGPVRAVAWAEGGEYFATAAEPFGRYPGQVAVYYCPAGAEEYDLLPIEGRMFEIPPEVRAAQLVWLNNNKELLIAYDDGSLHILDAEFGEELQ 213
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: A0A7R9YCC7_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCC7_9STRA) HSP 1 Score: 207 bits (526), Expect = 3.880e-62 Identity = 97/183 (53.01%), Postives = 136/183 (74.32%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTEL 552
RPILLKGHERA+T V YN DGDL+F+AAKD P++WYA TG R+GT+ GHQGAVWDL VS+DS+R+L+ASADA+ R+W+V+TGREL Y+H GPVR+V++AEG Q FAT ++PF PG I+V+ P D I ++PP+++A+++ W N++++++Y DG++R D G EL
Sbjct: 40 RPILLKGHERALTRVKYNADGDLLFSAAKDPKPTVWYADTGVRLGTFNGHQGAVWDLDVSYDSSRLLTASADATVRLWEVRTGRELCQYDHSGPVRAVAWAEGCQYFATAAEPFGKHPGQIAVYYCPSDAEEYDQLPIENRVFEIPPEVRASQIAWLNNNKEILIAYDDGSLRILDAEYGDEL 222
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: A0A7S2NVM0_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVM0_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.430e-59 Identity = 98/192 (51.04%), Postives = 129/192 (67.19%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMK-----ATKVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQ 564
RPILLKGHER+IT V YN DGDL+FTA+KD +PS+W A+ G R+GT+ GH+G +WDL +T +LSASAD + ++W + G+ + Y H GPVR V++A GGQ FAT+SDPF + PG ISVF P +Q + LEI+LP K AT VVW LNE + V++ +G IR +DP +G ELE Q
Sbjct: 2 RPILLKGHERSITVVKYNRDGDLLFTASKDHVPSVWRAEDGSRLGTFNGHKGTIWDLDSDSTTTYLLSASADTTVKLWSICDGQIIRDYPHRGPVRGVAWAAGGQMFATISDPFVEHPGYISVFAVPKSESPEQWSEKPILEIELPKNNKGQRVNATNVVWLNLNEAIFVTFDNGCIRLYDPENGEELEEIQ 193
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: A0A1Z5K121_FISSO (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K121_FISSO) HSP 1 Score: 198 bits (503), Expect = 3.260e-59 Identity = 97/184 (52.72%), Postives = 126/184 (68.48%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPP----KMKATKVVWGALNEKLIVSYADGTIRTFDPYDG 543
RP LL+GHER IT V +N+DGDL+FTA+KD +PS+W + GER+GTY GH+G VWDL + R+L+ASAD S R+WDV+TG + V+NH GPVR V++AEG Q F T+SDPF D P I VF+AP+D LEI+LP +K T V W ALNE L+V++ +G IR +DP G
Sbjct: 2 RPYLLQGHERPITTVQFNHDGDLLFTASKDLVPSVWRVENGERLGTYNGHKGTVWDLDCDRFTKRLLTASADTSCRLWDVRTGECIFVFNHKGPVRGVAWAEGSQMFVTISDPFVDHPAKICVFDAPEDQDPSTYTDPPRLEIELPKINGKVVKPTHVHWTALNEDLLVAFDNGQIRLYDPETG 185
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: A0A7S3L4V7_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4V7_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.070e-52 Identity = 86/184 (46.74%), Postives = 122/184 (66.30%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPP----KMKATKVVWGALNEKLIVSYADGTIRTFDPYDG 543
RP LL+GHER IT + +N DGDL+FTA+KD +PS+W+ G+R+GTY GH+G VWDLS S R+L+ASAD + R+W+VQTG + + H GPVR V +AEG Q+F T++D F D P ISV++ P+ + L IDLP ++ T V W A+NE ++V++ +G I+ +DP G
Sbjct: 2 RPYLLQGHERPITSIEFNYDGDLLFTASKDHVPSVWWVDGGKRLGTYTGHKGTVWDLSCDRFSRRLLTASADTTCRLWNVQTGECIRHFTHTGPVRGVEWAEGSQKFVTINDSFMDHPPKISVYDVPEGQDPESYSDEPSLVIDLPKHATKRVAPTNVKWTAMNEDILVAFDNGMIKLYDPETG 185
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Match: A0A7S2I6P0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6P0_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.220e-51 Identity = 86/189 (45.50%), Postives = 119/189 (62.96%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPP-----KMKATKVVWGALNEKLIVSYADGTIRTFDPYDGTELE 555
RPILLKGHER+IT V YN DGDL+FTA+KD +PS+W A++G+R+GT+ GH+G +WDL V STR+L+ + V++H GPVR V++A+G FAT+SDPF D IS+++ P D + LEIDLP ++ T +VW LNE L V++ +G+IR +D G ELE
Sbjct: 2 RPILLKGHERSITVVKYNYDGDLLFTASKDHVPSVWRAESGDRLGTFAGHKGTIWDLDVDRFSTRVLTXXXXXXXXXXXXXXXECIKVFSHRGPVRGVAWADGSNSFATISDPFVDHNAQISIYDVPQDESPSDYDDTPRLEIDLPKTNDGKRVNPTNIVWLNLNEALFVTFDNGSIRLYDTVTGDELE 190 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11401.1136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11401.1136.1 >prot_E-fasciculatus_F_contig11401.1136.1 ID=prot_E-fasciculatus_F_contig11401.1136.1|Name=mRNA_E-fasciculatus_F_contig11401.1136.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=199bp QRPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGback to top mRNA from alignment at E-fasciculatus_F_contig11401:38..1387- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11401.1136.1 ID=mRNA_E-fasciculatus_F_contig11401.1136.1|Name=mRNA_E-fasciculatus_F_contig11401.1136.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1350bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11401:38..1387- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11401:38..1387- >mRNA_E-fasciculatus_F_contig11401.1136.1 ID=mRNA_E-fasciculatus_F_contig11401.1136.1|Name=mRNA_E-fasciculatus_F_contig11401.1136.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1194bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11401:38..1387- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |