mRNA_E-fasciculatus_F_contig11400.1135.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE) HSP 1 Score: 115 bits (288), Expect = 5.690e-27 Identity = 88/159 (55.35%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 1 RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVM------FSAAKSPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASWSTVVTTGAYGSPWPRDQSTCLLWCAIALGALVRGCPLEHVECYVDLAKESLATFKDQANLDTAR 459
R+RL+ASPATGL GL E+ L DF CLGFLSLA+ SIIR AMV VM + P+R XXXXXXXXXXXXX A W VTT + PRD STC+LWCAIALGALVRG PL HV+ YV LAK++LA+ A LD AR
Sbjct: 210 RARLSASPATGLAGLLENELLGDFFGCLGFLSLATESIIRGAMVSVMRANNVLIQQGATTPARPXXXXXXXXXXXXXDTEETPVSSVRTEE-ACWRNAVTTE--DAALPRDASTCILWCAIALGALVRGYPLPHVQRYVHLAKDTLASCSASAALDMAR 365
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: D7FTD5_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD5_ECTSI) HSP 1 Score: 101 bits (251), Expect = 4.070e-23 Identity = 63/153 (41.18%), Postives = 80/153 (52.29%), Query Frame = 1
Query: 1 RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVMFSAAKSPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASWSTVVTTGAYGSPWPRDQSTCLLWCAIALGALVRGCPLEHVECYVDLAKESLATFKDQANLDTAR 459
R RL ASPATGLVG++E G+L DF C G L L + S +R AMV +M A + P R TVV G P + C++WCAIALGAL+RG P+EHVE YV+LA+ESLA D +++ AR
Sbjct: 141 RCRLRASPATGLVGMKESGFLCDFFGCFGILPLTTESTVRNAMVEIMMGA-ELPRKRYNEEHLGVRTRWAEDEGEGEEKGCSGDR-----TVVRRGTQ----PDHAAMCMMWCAIALGALMRGVPVEHVEMYVNLARESLAECFDGRSIEHAR 283
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: D8LCV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV4_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 3.740e-20 Identity = 58/141 (41.13%), Postives = 72/141 (51.06%), Query Frame = 1
Query: 1 RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVMFSAAKSPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASWSTVVTTGAYGSPWPRDQSTCLLWCAIALGALVRGCPLEHVECYVDLAKESLA 423
R RL+ASPATGLV +QE+ +L DF C+GFL L +PS IR MV +M A S S G S + + GS P D S C WCA+ALGALV+G P+E V Y LA+E+LA
Sbjct: 6 RCRLSASPATGLVEMQENTFLSDFFGCIGFLPLTTPSQIRETMVKIMVPPASSQQS-----------VFGDGSDKRGHYFEAVAPGGDLSKI----SAGSQLPMDPSACTFWCAVALGALVKGSPIESVTSYAQLAQEALA 131
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: D8LCV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 9.280e-20 Identity = 57/147 (38.78%), Postives = 73/147 (49.66%), Query Frame = 1
Query: 1 RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVMFSAAKSPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASWSTVVTTG------AYGSPWPRDQSTCLLWCAIALGALVRGCPLEHVECYVDLAKESLA 423
R RL+ASPATGLVG+QE+ +L DF C+GFL L +PS IR MV +M A S S G + V G + + +P D S C WCA+ALGAL +G P+E V Y LA+E+LA
Sbjct: 10 RCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRETMVTIMLPRASSQQS---------------------VFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGALAKGSPIESVTSYAQLAQEALA 135
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: D8LSE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE2_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 4.890e-19 Identity = 60/135 (44.44%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 1 RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVMFSA------AKSPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASWSTVVTTGAYGSPWPRDQSTCLLWCAIALGALVRGCPLEHV 387
R+R++ASPATGL GL E+ L +F CLGFLSLA+ SI+R AMV VM ++ + P+R A W VTT + PRD STC+LWCAIALGALVRG PL HV
Sbjct: 69 RARISASPATGLAGLLENELLGEFFGCLGFLSLATESIVRGAMVSVMRASNGLNQRGATTPARPRPATDGAWLVEEDDTEEAPASSVRTEE-ACWRKAVTTE--DAALPRDASTCILWCAIALGALVRGYPLPHV 200
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: D7FY45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY45_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 6.940e-19 Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 1
Query: 331 LWCAIALGALVRGCPLEHVECYVDLAKESLATFKDQANLDTAR 459
+WCAIALGALVRGCP+EHVE YVDLA+ESLATF+DQANLDTAR
Sbjct: 1 MWCAIALGALVRGCPVEHVESYVDLAQESLATFRDQANLDTAR 43
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: A0A6H5L0K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 6.090e-18 Identity = 58/153 (37.91%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 1 RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVMFSAAKSPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASWSTVVTTGAYGSPWPRDQSTCLLWCAIALGALVRGCPLEHVECYVDLAKESLATFKDQANLDTAR 459
R RL++SPATGLVG+ E+G+L DF CLG L L + S +R AMV VM R G + + T P + C++WCAIALGAL+RG P+E V YV LA+ESLA D +++ AR
Sbjct: 165 RCRLSSSPATGLVGMPENGFLCDFFGCLGILPLTTESTVRNAMVEVMM--------RQCGGQVYSGTGGSGMEGLAEDEEKGWRGGGALARRHTL-------PDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHAR 302
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 8.270e-18 Identity = 59/153 (38.56%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 1 RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVMFSAAKSPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASWSTVVTTGAYGSPWPRDQSTCLLWCAIALGALVRGCPLEHVECYVDLAKESLATFKDQANLDTAR 459
R RL+ASPATGLVG+QE+G+L F CLG L L + S +R AMV VM R G + + T P + C++WCAIALGAL+RG P+E V YV LA+ESLA D +++ AR
Sbjct: 164 RCRLSASPATGLVGMQENGFLGAFFGCLGILPLTTESTVRNAMVEVMM--------RQCGGQAYSRTGGSGMEGLAEDEEKGWCGGGALARRHTL-------PDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHAR 301
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 4.880e-17 Identity = 58/153 (37.91%), Postives = 72/153 (47.06%), Query Frame = 1
Query: 1 RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVMFSAAKSPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASWSTVVTTGAYGSPWPRDQSTCLLWCAIALGALVRGCPLEHVECYVDLAKESLA-TFKDQANLDTA 456
R RL ASPATGLVG+QE+ +L DF C+GF+ L S S IR MV +M S A S W+ P D STC WCAIALGAL +GCP+E V Y LA E+L ++ A+ + A
Sbjct: 6 RFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIMASPAPLQQSAIGGAFGGVGSMVRARC---------------WNKASEKPQL----PMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKSYPSSADAEVA 139
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 8.310e-16 Identity = 55/140 (39.29%), Postives = 66/140 (47.14%), Query Frame = 1
Query: 1 RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVMFSAAKSPPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASWSTVVTTGAYGSPWPRDQSTCLLWCAIALGALVRGCPLEHVECYVDLAKESL 420
R RL+ASPATGLVG+QE+ +L DF C+GF+ L S S IR MV +M S A S W+ P D STC WCAIALGAL +G P+E V Y LA E+L
Sbjct: 110 RFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPLQQSAIGGACSEVGTMVRAPC---------------WNEASERNQL----PMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEAL 230 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11400.1135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11400.1135.1 >prot_E-fasciculatus_F_contig11400.1135.1 ID=prot_E-fasciculatus_F_contig11400.1135.1|Name=mRNA_E-fasciculatus_F_contig11400.1135.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=154bp RSRLAASPATGLVGLQEDGYLMDFLDCLGFLSLASPSIIRTAMVGVMFSAback to top mRNA from alignment at E-fasciculatus_F_contig11400:3010..4407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11400.1135.1 ID=mRNA_E-fasciculatus_F_contig11400.1135.1|Name=mRNA_E-fasciculatus_F_contig11400.1135.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1398bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11400:3010..4407- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11400:3010..4407- >mRNA_E-fasciculatus_F_contig11400.1135.1 ID=mRNA_E-fasciculatus_F_contig11400.1135.1|Name=mRNA_E-fasciculatus_F_contig11400.1135.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=924bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11400:3010..4407- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |