mRNA_E-fasciculatus_F_contig11166.924.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11166.924.1
Unique NamemRNA_E-fasciculatus_F_contig11166.924.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: D7FIV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIV7_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 6.040e-135
Identity = 210/250 (84.00%), Postives = 219/250 (87.60%), Query Frame = 2 
Query:    8 QAYYCCITQLLASWTRRGCATTGVIGTTGVEEEKXXXXXXXXXXXXXXXXKEEAVYVCGDSHTLTPAWHQVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMVDKSKHLHWLDFFDQLLDDKGTSLRPEFGLDGTHLAAGYVGLLEKALADVWVERR 757
            QAYYCCITQLLASWTRR C  +G     GVEEEK                 +EAVYVCGDSHTLTPAWH+VTVGGKRRVLRPALVTGLKHWHLRPESDFYPK+NFESVMAKVPNGSAVVF+LGEIDCREGILVAVEKLRYKTA +G+EHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVK YNRVFRRMVDKSKHLHWLDFF+QLLDD G+SLRP F LDGTHLAAGYVGLLEKALAD WVERR
Sbjct:  614 QAYYCCITQLLASWTRRSCTASG-----GVEEEKKSAEGDGSDD-------KEAVYVCGDSHTLTPAWHEVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKRNFESVMAKVPNGSAVVFILGEIDCREGILVAVEKLRYKTAEEGIEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKTYNRVFRRMVDKSKHLHWLDFFEQLLDDTGSSLRPNFRLDGTHLAAGYVGLLEKALADAWVERR 851
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: A0A7S1U1R8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1R8_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.470e-63
Identity = 118/247 (47.77%), Postives = 151/247 (61.13%), Query Frame = 2 
Query:   11 AYYCCITQLLA-SWTRRGCATTGVIGTTGVEEEKXXXXXXXXXXXXXXXXKEEAVYVCGDSHTLTPAWHQVTVG-GKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMV----DKSKHLHWLDFFDQLLDDKGTSLRPEFGLDGTHLAAGYVGLLEKAL 733
            AYYCCI Q++A ++ R G A+       G+EE                    E +YVCGDSH++TPAW  VT G    R L P LVTGLKHWHLRPE++FYPK NF   M  +P+G+  + + GEIDCREGILVAV+K RY++   G+ HT+ IF  V + L   RG R+F+HPV+PVL+ETR MV  YN  FRR       + K +HWLDF  +LLD     LR +  LDGTH+   Y+ L+E AL
Sbjct:   25 AYYCCIAQVMALTFPRDGPASKRA--PPGLEEV-------------------EPLYVCGDSHSITPAWSWVTCGEAGPRPLVPRLVTGLKHWHLRPETNFYPKYNFLRAMESLPDGADAIMIFGEIDCREGILVAVDKGRYESVEDGIAHTLDIFFSVLDGLLESRGFRVFMHPVLPVLNETRAMVAKYNEQFRRRTLAAAAQGKRVHWLDFEGELLDGASGKLRADLELDGTHIHPSYLALVEAAL 250
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: A0A485KK26_9STRA (Aste57867_8367 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK26_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.930e-61
Identity = 109/191 (57.07%), Postives = 137/191 (71.73%), Query Frame = 2 
Query:  170 VYVCGDSHTLTPAWHQVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMVDKSKHLHWLDFFDQLLDDKGTSLRPEFGLDGTHLAAGYVGLLEKALADV 742
            +YVCGDSHTL  AW  ++V G  RVL P+LVTGLKHWHLRPES FYPK NF +V+  +P+G+ VVF+ GEIDCREG+L+AVEK RY+T  +GM  T+ IF+ V + L R+RG R +VHP++PVL+ETR +V+ YN  F+R VD S    WLDFFD LL      L+P F LDGTHL   Y+ LL  A+  V
Sbjct:  542 IYVCGDSHTLATAWRVISVHGHDRVLVPSLVTGLKHWHLRPESTFYPKVNFYNVVQTIPHGADVVFLFGEIDCREGLLLAVEKCRYETLDEGMTKTISIFMDVLQTLVRDRGFRAYVHPIVPVLNETRPIVQQYNAHFKRKVDASACAQWLDFFDALLTP-AHKLQPSFELDGTHLHPAYLDLLAHAIERV 731
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: A0A7S2D3K4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3K4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.600e-60
Identity = 108/246 (43.90%), Postives = 151/246 (61.38%), Query Frame = 2 
Query:   14 YYCCITQLLASWTRRGCATTGVIGTTGVEEEKXXXXXXXXXXXXXXXXKEEAVYVCGDSHTLTPAWHQVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMVDKSKHLHWLDFFDQ--LLDDKGTS----LRPEFGLDGTHLAAGYVGLLEKAL 733
            YYCC+ Q L+         TG  GT    E                      +++CGDSH ++PAW +++VG +  +LRP LVTGLKHWHLR  +DFYPKKNF  V+  +P+G+ VVF+ GEIDCREGILVAVEK RY+T  +GM  T+  F+K    + R +  R+F+HPV PVL+ETR +   YN+++RR V ++  LHWL+   +  L+  +G++    LRP+  LDGTHL   Y+ L+ +AL
Sbjct:    1 YYCCLVQTLS---------TGTQGTRDAHEGTLP-----------------VIHLCGDSHVISPAWQRISVGDQTHLLRPQLVTGLKHWHLREATDFYPKKNFYRVVDGIPDGANVVFMFGEIDCREGILVAVEKGRYETVEEGMLVTMNFFLKAVVEVQRRKKFRVFIHPVNPVLNETRHLCMAYNKIYRRRVRETPGLHWLENVAERMLVGGEGSTQKKTLRPDLALDGTHLHPSYLKLVSEAL 220
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: W2QE94_PHYPN (Uncharacterized protein n=41 Tax=Phytophthora TaxID=4783 RepID=W2QE94_PHYPN)

HSP 1 Score: 222 bits (566), Expect = 2.770e-60
Identity = 113/242 (46.69%), Postives = 151/242 (62.40%), Query Frame = 2 
Query:    8 QAYYCCITQLLASWTRRGCATTGVIGTTGVEEEKXXXXXXXXXXXXXXXXKEEAVYVCGDSHTLTPAWHQVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMVDKSKHLHWLDFFDQLLDDKGTSLRPEFGLDGTHLAAGYVGLLEKAL 733
            QAYY CI QLL+         +  +   G  +                     A+Y+CGDSHTL  AW +++   ++ +LRPALVTGLKHWHLR ES FYPK NF  V+A +P+ S V+F+ GEIDCREGIL AVEK +Y+T  +GMEH +GIF++V   +  +    +++HPV+PVLDETR +V  YN++F++ VD+S    WLDF D L+      LRPEF LDGTHL   Y+  LE+AL
Sbjct:  606 QAYYACIAQLLS--IENALVMSPPVSPDGCPD---------------------AIYICGDSHTLATAWREISPHDEQILLRPALVTGLKHWHLRKESTFYPKLNFWHVVANIPSKSRVIFLFGEIDCREGILEAVEKCKYETIKEGMEHAIGIFMEVLSDIVEKFEFDVYIHPVVPVLDETRSLVISYNKLFQKRVDESSISRWLDFHDDLVCGDPPKLRPEFRLDGTHLHPSYLSKLEEAL 824
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: A0A833TQX5_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TQX5_PHYIN)

HSP 1 Score: 214 bits (546), Expect = 7.270e-60
Identity = 101/189 (53.44%), Postives = 132/189 (69.84%), Query Frame = 2 
Query:  164 EAVYVCGDSHTLTPAWHQVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMVDKSKHLHWLDFFDQLLDDKGTSLRPEFGLDGTHLAAGYVGLLEKA 730
            +A+YVCGDSHTL  AW ++ V  +  +LRPALVTGLKHWHLR ES FYPK NF  V+A +PN S V+F+ GEIDCR GIL AVEK +Y+T  +GM+HT+ IF+ V   +  +    +++HPV+PVLDETR +V  YN++F + V KS    WLDFFD+L+ +    LRP F LDGTH+   Y+  L  A
Sbjct:  304 DAIYVCGDSHTLATAWREINVEDRSILLRPALVTGLKHWHLRKESTFYPKLNFWRVLANIPNRSRVIFLFGEIDCRVGILEAVEKCKYETIEEGMKHTIDIFMDVLSDVVEKYAFDVYIHPVVPVLDETRLLVIQYNKLFEKRVVKSSICKWLDFFDELVCEDPPKLRPNFRLDGTHMHPSYLSTLAAA 492
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BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: A0A7S3BBD6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BBD6_9EUKA)

HSP 1 Score: 203 bits (517), Expect = 2.650e-59
Identity = 101/191 (52.88%), Postives = 129/191 (67.54%), Query Frame = 2 
Query:  170 VYVCGDSHTLTPAWHQVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMVDKSKHLHWLDFFDQLLDDKGTSLRPEFGLDGTHLAAGYVGLLEKALADV 742
            +Y+ GDSH+L+PAW  V   G+  +LRPAL TG K WHLR ESDF+PK NFE  ++ +P  S V+F  GEIDCREG+LVAVE+ RY++   G++ TVGI+I   + L+RER  R+ VHPV PVL+ETR +VK++N      V     L +LDFFD+LL   G +L     LDGTHL   YV LLEKAL  V
Sbjct:    3 LYIAGDSHSLSPAWRTVEYQGRPHLLRPALATGCKIWHLRKESDFFPKANFEVAISAIPQKSPVIFCFGEIDCREGLLVAVERCRYESLEAGVDFTVGIYIGKLKQLARERQFRVMVHPVAPVLNETRHIVKLFNARLAAAVRAEPDLLYLDFFDELLSPDGNALADGLALDGTHLHPDYVKLLEKALPAV 193
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: A0A2D4BJE6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJE6_PYTIN)

HSP 1 Score: 216 bits (549), Expect = 1.040e-58
Identity = 98/192 (51.04%), Postives = 133/192 (69.27%), Query Frame = 2 
Query:  158 KEEAVYVCGDSHTLTPAWHQVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMVDKSKHLHWLDFFDQLLDDKGTSLRPEFGLDGTHLAAGYVGLLEKAL 733
            K  ++YVCGDSHTL  AW  + V G+   LRPALVTGLKHWHLR ES+FYPK NF +V+  +P  S V+F++GEIDCREGIL A E+ +Y++  +GM HT+ IF+ V   +  + G  +F+HP++PV +ETR +V  YN +F+  V+KS    WLDFFD L++     LRP + LDGTHL   Y+ L+E+ L
Sbjct:  492 KPSSIYVCGDSHTLATAWRNIEVDGESTQLRPALVTGLKHWHLRKESEFYPKHNFWTVIGSLPPRSRVIFLIGEIDCREGILQAYERCKYESIQEGMXHTIDIFMSVLAEVIDKFGFEVFIHPIVPVXNETRPLVIQYNGIFQSRVNKSDKCRWLDFFDDLIEGSPARLRPRYALDGTHLHPSYLALVEREL 683
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: A0A1V9ZM71_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM71_9STRA)

HSP 1 Score: 215 bits (547), Expect = 2.510e-58
Identity = 118/234 (50.43%), Postives = 144/234 (61.54%), Query Frame = 2 
Query:   11 AYYCCITQLLASWTRRGCATTGVIGTTGVEEEKXXXXXXXXXXXXXXXXKEEAVYVCGDSHTLTPAWHQVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMVDKSKHLHWLDFFDQLLDDKGTSLRPEFGLDGTHLAAGYV 712
            AYYCCI QLL       C T   +    V                      EA+YVCGDSHTL  AW  +     R V  PALVTGLKHWHLRPES FYPK NF +V+ ++P  + V+F+LGEIDCREGILVAVEK RY++  +GM  T+GIF+KV EAL  E   +  +HPV+PVL+ETR +V  YN +FR  VDK+    W+D FD LLD +G  LR E+ LDGTHL   Y+
Sbjct:  488 AYYCCIAQLL-------CVTEPPLVPPPV-------------------LASEAIYVCGDSHTLPTAWRALPSQSLRFV--PALVTGLKHWHLRPESAFYPKHNFHNVVRRLPPRARVLFLLGEIDCREGILVAVEKCRYESLDEGMTATIGIFMKVLEALVAEHRFQALIHPVVPVLNETRHLVMRYNALFRAQVDKASFCTWIDCFDNLLDARG-QLRLEYALDGTHLHPAYI 692
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Match: A0A329SHC9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SHC9_9STRA)

HSP 1 Score: 216 bits (551), Expect = 3.440e-58
Identity = 111/242 (45.87%), Postives = 149/242 (61.57%), Query Frame = 2 
Query:    8 QAYYCCITQLLASWTRRGCATTGVIGTTGVEEEKXXXXXXXXXXXXXXXXKEEAVYVCGDSHTLTPAWHQVTVGGKRRVLRPALVTGLKHWHLRPESDFYPKKNFESVMAKVPNGSAVVFVLGEIDCREGILVAVEKLRYKTAAKGMEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKIYNRVFRRMVDKSKHLHWLDFFDQLLDDKGTSLRPEFGLDGTHLAAGYVGLLEKAL 733
            QAYY CI QLL+           ++ +     E                   +A+YVCGDSHTL  AW ++ +  +  +LRPALVTGLKHWHLR ES FYPK NF  V+A +P+ S V+F+ GEIDCREGIL AVEK +Y+T  +GMEHT+GIF++    +  +    +++HPV+PVLDETR +V  YN++F++ V  S    WLDFF++L+ +    LR E  LDGTHL   Y+  LE AL
Sbjct:  607 QAYYACIAQLLS-------IKKALVMSPPASPEA----------------SPDAIYVCGDSHTLATAWREINLDDRSILLRPALVTGLKHWHLRKESTFYPKLNFWRVVANIPSRSRVIFLFGEIDCREGILDAVEKCKYETIKEGMEHTIGIFMEALSDVVEKYEFDVYIHPVVPVLDETRSLVIQYNKLFQKHVANSSSCKWLDFFNELVCEDPPKLRSELRLDGTHLHPSYLSKLEAAL 825
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11166.924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIV7_ECTSI6.040e-13584.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1U1R8_9STRA1.470e-6347.77Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A485KK26_9STRA2.930e-6157.07Aste57867_8367 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S2D3K4_9STRA1.600e-6043.90Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W2QE94_PHYPN2.770e-6046.69Uncharacterized protein n=41 Tax=Phytophthora TaxI... [more]
A0A833TQX5_PHYIN7.270e-6053.44Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A7S3BBD6_9EUKA2.650e-5952.88Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A2D4BJE6_PYTIN1.040e-5851.04Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1V9ZM71_9STRA2.510e-5850.43Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A329SHC9_9STRA3.440e-5845.87Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11166contigE-fasciculatus_F_contig11166:195..4517 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1550
Cds size837
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11166.924.1prot_E-fasciculatus_F_contig11166.924.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11166 908..4517 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927622.4396691-UTR-E-fasciculatus_F_contig11166:194..9071622927622.4396691-UTR-E-fasciculatus_F_contig11166:194..907Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11166 195..907 -
1695995623.5086408-UTR-E-fasciculatus_F_contig11166:194..9071695995623.5086408-UTR-E-fasciculatus_F_contig11166:194..907Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11166 195..907 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927622.4599414-CDS-E-fasciculatus_F_contig11166:907..11681622927622.4599414-CDS-E-fasciculatus_F_contig11166:907..1168Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 908..1168 -
1695995623.5195699-CDS-E-fasciculatus_F_contig11166:907..11681695995623.5195699-CDS-E-fasciculatus_F_contig11166:907..1168Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 908..1168 -
1622927622.4710467-CDS-E-fasciculatus_F_contig11166:1715..18161622927622.4710467-CDS-E-fasciculatus_F_contig11166:1715..1816Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 1716..1816 -
1695995623.5298123-CDS-E-fasciculatus_F_contig11166:1715..18161695995623.5298123-CDS-E-fasciculatus_F_contig11166:1715..1816Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 1716..1816 -
1622927622.4826262-CDS-E-fasciculatus_F_contig11166:2448..25961622927622.4826262-CDS-E-fasciculatus_F_contig11166:2448..2596Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 2449..2596 -
1695995623.5398066-CDS-E-fasciculatus_F_contig11166:2448..25961695995623.5398066-CDS-E-fasciculatus_F_contig11166:2448..2596Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 2449..2596 -
1622927622.4978673-CDS-E-fasciculatus_F_contig11166:3492..35851622927622.4978673-CDS-E-fasciculatus_F_contig11166:3492..3585Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 3493..3585 -
1695995623.5497262-CDS-E-fasciculatus_F_contig11166:3492..35851695995623.5497262-CDS-E-fasciculatus_F_contig11166:3492..3585Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 3493..3585 -
1622927622.5108833-CDS-E-fasciculatus_F_contig11166:4283..45171622927622.5108833-CDS-E-fasciculatus_F_contig11166:4283..4517Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 4284..4517 -
1695995623.5578203-CDS-E-fasciculatus_F_contig11166:4283..45171695995623.5578203-CDS-E-fasciculatus_F_contig11166:4283..4517Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11166 4284..4517 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11166.924.1

>prot_E-fasciculatus_F_contig11166.924.1 ID=prot_E-fasciculatus_F_contig11166.924.1|Name=mRNA_E-fasciculatus_F_contig11166.924.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=279bp
MPPGVLLLHHAAAGVVDPSRLCYHRCHRYHRCRGRERERVSRGRRQRRRR
RRQGGGRLRLRGLAHAHPGLAPGHGGRKAARSTAGSGDRAQALAPEARER
LLPQEELRKRDGQGSQRVGGGLRPRRDRLPRRNPGCGGEAPLQDGREGHG
AHGRHLHQGCRGLVAGAGAEDLRTPRDSGARRDPRHGQDLQPRVPADGGQ
VQAPALARLLRPASGRQRYQPSARIRPGRDPPRRGLRRPPRKGVGGCLGG
AAGGGAGGTRGQEKVEGAWYSQPCMLMP*
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mRNA from alignment at E-fasciculatus_F_contig11166:195..4517-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11166.924.1 ID=mRNA_E-fasciculatus_F_contig11166.924.1|Name=mRNA_E-fasciculatus_F_contig11166.924.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4323bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11166:195..4517- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCCCCAGGCGTACTACTGCTGCATCACGCAGCTGCTGGCGTCGTGGA
CCCGTCGCGGTTGTGCTACCACCGGTGTCATCGGTACCACCGGTGTCGAG
GAAGAGAAAGAGAAAGAGTCAGTCGAGGGAGGAGGCAACGACGGCGACGG
CGACGGCAAGGAGGAGGCCGTCTACGTCTGCGGGGACTCGCACACGCTCA
CCCCGGCCTGGCACCAGGTCACGGTGGGCGGAAAGTGAGTTCGAGATACA
ATACAGCAGTACGGTGATGACCTTTAGAGGTGTGTTTCTACACCGCACTC
GCGTTCTTGGCTGACCCTGAGTGTGACGCTGTTGCGTCTAGCAGGTGGAG
ACAAAACCCGGCAGATGGACGTACATACACATGCCGATGTTGCAATCGAG
GTTTATGGTTGGATTTGTTTTCTTCGTCAAAGCCTTAAGAAAGATGCCAA
GTCGCAATCCGTGGCACGTTTTTTTTTCCCCGCTTTTTTATGTCATTTTA
TTGTCGTGCGGGGTCCGTGGATGGCAGCATTCAAAGCGTCTGACACGTGG
ATCCCTCTGTTCCATTGTTCCATCCTGCAATACTGTTTGGACCTAGAGCC
CGGCTATGATCAAAGCGTTTCGTTTCAGCGCCAGTGCACAGCTTGTTGCT
TCTCTATCTGGTAGCTCGAGCCTATGTTCACGAGCCGTCGAAGGCATCGC
ATCTTGGCGTGCACAGAGCGGCAGGAAGAGGGTGGTGGCATGCCGCTTTT
TCCCTCGCTCGTGCAGCCACAAGTCAAGGTTTGCCGTAACTTCGGCCGTC
GATTTTATCCAGCTGCTTCGACGCCCGTTGCGCGTGAACTTGCCGTCAAG
AATTTTGGCAGTCTTCGTACTTTCCTTACCTTTGCGCCTTCGCGTTGGTT
CGGTTGGGGGCTTTGCTCGGTTGTTTTGCCAGGCGGCGCGTTCTACGGCC
GGCTCTGGTGACCGGGCTCAAGCACTGGCACCTGAGGCCCGAGAGCGACT
TCTACCCCAAGAAGAACTTCGAAAGGTGAGTCCGTGGTGTCATGTCTGCG
TGACAAAAAGAAGTACATATCATCTTGTTGTGGCAAGGTGGTAAAACAAG
AGTATCATCTTCCAGCCCAAGATTCGCAAGAAAATGAGGTATCGTTTTTG
GCGACGGTATGCCCAGGAAGGCGCAAGGTTTCTGATGTATTCACCGTTTC
AACAATGTCGTCACACAGCAAAACCAAGTACTATTTTGTCCTTACGGCGC
GTATATGGTCGTCCAGAGTGGTACGTATCAGCCATAATGAGGCATCATCT
TGTGGGAGGGAGGATGGCAAAACATGGTACCATCTTGTGGGAAGGGAAGG
TACATCCAGCATGGAATGCAGGATGCGTGTACGCATGAGTACGCGCAAGA
CATCCGTGAGCATGCGCATATGGATGGTGTGTAGCGATAACAGAACGTGA
GTTTGCGAAGACATAGCGTCGAGATTTCTCAGGCCATATGGCGTCATTAT
TCACCAACAGCACGCGTGTGTTAGGAAGCGGAGTTTCGCTTGGCGACAGT
CCAACCATGGCGGAATTCTTGGCCTCCGGGCGCATTGATGGGGTGCCCGG
TGCGTTTCTGGGTGTGATGCTGCGGAACGTCTCCTTCATAAAGTCAAGGA
GTGTTGACGACACACCATCTCAGGGAAGGGGGAGGGGGCAATGTGCCAGC
CACGCTCCAGCGGTCTGCAGGACAGCACCTTTCGCAGAACCACACCCCGT
TCCGACGCAAACACTTGTGTCGTGTGGATGACAGCCTCTCCTGTCCTTGG
TGAGGCCTTTTCACTTTCACTTTCACTTTCACTTTAATAAAGCCAGTGGC
ATCAAACGTGACGACATTTTCGTCTCCCCATTTCCCCGATGCCCCCGCCA
ACCGACTGACCGCTGCCCCAGCGTGATGGCCAAGGTTCCCAACGGGTCGG
CGGTGGTCTTCGTCCTCGGAGAGATCGACTGCCGCGAAGGAATCCTGGTT
GCGGTGGAGAAGCTCCGCTACAAGACGGCCGCGAAGGGCATGGAGCACAC
GGTCGGCATCTTCATCAAGGTCAGGAAGTGCTGGTTCCGACCGTCTGCTC
TGGTGGTAGTTTTTTGTTTTTTACCGCCTTTGGGCTTACGTTTCCGATGA
TGCATCGGCCGGGGTAAAACAGGCTGTAGGCGGTTCGAAGGAAGCCCACG
ATGTTGTATGCATGTGGAAGTGGGAAATCAAGTGCGTCGCTGTGACGTCG
ACGTAAAAAGTTGTGTTCGAACGTTGTGGACCTCTCGCCTGCAGCTGGCT
CATTTTTTGTCGAGGCGCGGCGCTACACACGAGGACGAAAAGCTCTTACT
CGCGCACTTGTTTTTCTTGGAACAGCAGTAGTAGCACAGAAGCACATCGC
TCATTGCCGCTGTTAATGGCACAAAGTAGACCTGTTTGTTTGTCCAAAGC
ATTCCAACACCGACAACGGCAACAGTGCTGTATCACTGTCCGTATCACTG
TATGAGTGCCGTTGTCACAAATCTCTCTCTCCTCCCGAGCAAGTACAGGG
GAAGATAGATAGCAGTCCATGCCGTGTACCCTTTTGTGTGTGTTCGCTAC
GTAGACAGCCAACAGCACCCGTGCGCACTGCCCGGTGTCCCTACCCCTAT
CCCTACCCCTATCCTTACCCTTACCGCTCCTCTGACCTCTATCAAGGATA
GGTTGCCGAGGCCTTGTCGCGGGAGCGGGGGCTGAGGATCTTCGTACACC
CCGTGATTCCGGTGCTAGACGAGACCCGCGGCATGGTCAAGATCTACAAC
CGGTAAGGACGGGGTGATGGTCATGTCATGGGAGGGGAGGGGAGATAACG
GGGGGGCGAGGCGCAGAGCGAGGGAGGGACGGAACAATGGTGGTGATCCG
ACCGACTGACGGACTGACTGACCGACCGCCTGTTGCATGCGTAGACTGAT
GGTTTGACTTCACTGGGCATATGGAGACGGCTTGCGTCTCGGGGGAGATG
ACATCTGTAAGACATCTGTAAGTGATGAAGCGTAAACCTATTCCGGGTGA
TGGAGGCTCTCACGTCGAGGGTTGAGACGGGTCCATCTACTCCGTCCTTT
TGATCTGTTGATGTTTTGTTGTCGTTTGGCTCTTTGTAGTGTAGTGTAGC
TGTTGAGGTCAACTTCTACTTCTCCCAAAACGCACGATCGACCTACATAA
CCACGAGTACTTTTGAATCAAGTGGGTCCCAGTGCATACATCCGCGCCCT
TGAGGATCACCCCTCCCCCCTCATTGGAAACCCCTTTCGTCGCGTCGGAT
CTCTCCTCTGCAACACCGATGCAACACCCATGCAACACCCATGCGACAGC
GTGTTCCGGCGGATGGTGGACAAGTCCAAGCACCTGCACTGGCTCGACTT
CTTCGACCAGCTTCTGGACGACAAAGGTACCAGCCTTCGGCCAGAATTCG
GCCTGGACGGGACCCACCTCGCCGCGGGCTACGTAGGCCTCCTCGAAAAG
GCGTTGGCGGATGTCTGGGTGGAGCGGCGGGCGGCGGCGCAGGGGGGACG
CGCGGGCAAGAAAAAGTAGAGGGGGCGTGGTACTCACAGCCGTGCATGCT
GATGCCGTAGTCGTTATACCGTTGGCCTCATATCCCTGGACGAGCAACCC
GGGTTTTCACCCGGCCAGGCTAGCACGTCACCAAGCGCGGGAAGCGCCGT
GAGGTGTTCGGGGGGGGTATGTCCGAGAGTCGGGTAGATGGAGGGCTCGG
CTTTGGGGTGGCGTTGCGTTGCTATTGGCGTTGGGATTGTGTTGTGGTGG
TTTTTTGAGAAGAGGCCCGATTTCTGCTGCGATTTTCGGTCGGATTTGTT
ATTATTATTGTTGTTGTTGTTGTTGTTCGACGATTTTTGTTTTTTTTTCT
GTTTTTCGTTGTTCGTTGCACGCGATTGTTGAAGCGGGGAGGGTTGCGCC
TGCAGCTGAGACTGAGACTGAGACCGGCATGTTGTGTTTTGCGTGGGTTG
GTGTGCAGCTATTCACTCCGTCACGATAGCATTCGTGTCTTTATTTTCTG
GTTTGGTGTTGTGTGGGTCATTGCTGTCGTTTGTTCGGTGGTTTGGATCG
ACGATTACGACGGTGTGCTCACCGATATTTGTACCTCGTCTCTCTTGTGG
TAGTGTTCGCAGGCTGCATGAGAGGGGTCGTGATGAGATCGTTGTCAGTG
GACACGGGCGGGGCAGTTGTTCTCCAAGAAATGATTGATCATTGTTGTAT
TTCCAATGTCACGCGCCACCTGATGCCATGACGCAGCATGCAGTGCTCTT
CGACAGGAGGGCGGATGGATGCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11166:195..4517-

>mRNA_E-fasciculatus_F_contig11166.924.1 ID=mRNA_E-fasciculatus_F_contig11166.924.1|Name=mRNA_E-fasciculatus_F_contig11166.924.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1674bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11166:195..4517- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCCCCAGGCGTACTACTGCTGCATCACGCAGCTGCTGGCGTCGTGGA
CCCGTCGCGGTTGTGCTACCACCGGTGTCATCGGTACCACCGGTGTCGAG
GAAGAGAAAGAGAAAGAGTCAGTCGAGGGAGGAGGCAACGACGGCGACGG
CGACGGCAAGGAGGAGGCCGTCTACGTCTGCGGGGACTCGCACACGCTCA
CCCCGGCCTGGCACCAGGTCACGGTGGGCGGAAAATGCCCCCAGGCGTAC
TACTGCTGCATCACGCAGCTGCTGGCGTCGTGGACCCGTCGCGGTTGTGC
TACCACCGGTGTCATCGGTACCACCGGTGTCGAGGAAGAGAAAGAGAAAG
AGTCAGTCGAGGGAGGAGGCAACGACGGCGACGGCGACGGCAAGGAGGAG
GCCGTCTACGTCTGCGGGGACTCGCACACGCTCACCCCGGCCTGGCACCA
GGTCACGGTGGGCGGAAAGCGGCGCGTTCTACGGCCGGCTCTGGTGACCG
GGCTCAAGCACTGGCACCTGAGGCCCGAGAGCGACTTCTACCCCAAGAAG
AACTTCGAAAGGCGGCGCGTTCTACGGCCGGCTCTGGTGACCGGGCTCAA
GCACTGGCACCTGAGGCCCGAGAGCGACTTCTACCCCAAGAAGAACTTCG
AAAGCGTGATGGCCAAGGTTCCCAACGGGTCGGCGGTGGTCTTCGTCCTC
GGAGAGATCGACTGCCGCGAAGGAATCCTGGTTGCGGTGGAGAAGCTCCG
CTACAAGACGGCCGCGAAGGGCATGGAGCACACGGTCGGCATCTTCATCA
AGCGTGATGGCCAAGGTTCCCAACGGGTCGGCGGTGGTCTTCGTCCTCGG
AGAGATCGACTGCCGCGAAGGAATCCTGGTTGCGGTGGAGAAGCTCCGCT
ACAAGACGGCCGCGAAGGGCATGGAGCACACGGTCGGCATCTTCATCAAG
GTTGCCGAGGCCTTGTCGCGGGAGCGGGGGCTGAGGATCTTCGTACACCC
CGTGATTCCGGTGCTAGACGAGACCCGCGGCATGGTCAAGATCTACAACC
GGTTGCCGAGGCCTTGTCGCGGGAGCGGGGGCTGAGGATCTTCGTACACC
CCGTGATTCCGGTGCTAGACGAGACCCGCGGCATGGTCAAGATCTACAAC
CGCGTGTTCCGGCGGATGGTGGACAAGTCCAAGCACCTGCACTGGCTCGA
CTTCTTCGACCAGCTTCTGGACGACAAAGGTACCAGCCTTCGGCCAGAAT
TCGGCCTGGACGGGACCCACCTCGCCGCGGGCTACGTAGGCCTCCTCGAA
AAGGCGTTGGCGGATGTCTGGGTGGAGCGGCGGGCGGCGGCGCAGGGGGG
ACGCGCGGGCAAGAAAAAGTAGAGGGGGCGTGGTACTCACAGCCGTGCAT
GCTGATGCCGTAGCGTGTTCCGGCGGATGGTGGACAAGTCCAAGCACCTG
CACTGGCTCGACTTCTTCGACCAGCTTCTGGACGACAAAGGTACCAGCCT
TCGGCCAGAATTCGGCCTGGACGGGACCCACCTCGCCGCGGGCTACGTAG
GCCTCCTCGAAAAGGCGTTGGCGGATGTCTGGGTGGAGCGGCGGGCGGCG
GCGCAGGGGGGACGCGCGGGCAAGAAAAAGTAGAGGGGGCGTGGTACTCA
CAGCCGTGCATGCTGATGCCGTAG
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