mRNA_E-fasciculatus_F_contig11140.909.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11140.909.1
Unique NamemRNA_E-fasciculatus_F_contig11140.909.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: D8LTY6_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY6_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 7.150e-151
Identity = 255/301 (84.72%), Postives = 259/301 (86.05%), Query Frame = 1
Query:    1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEE--SGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGGGFGGGMPAAGSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEAQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            EISEAFEVL D+KKKKLYD+FGEAGLGPG G         SGMPFTRSRG      ASPFG XX      XXXXXXXXXXXXX F GSDPFSIFESMFGTGDINEAVG EGFPMGAGLNGMRMGGMGGGF    PA          RRQAPPVEHCLNLSLEELYQGSSKRMRITK+TSTGEAQVDKTI IKPGWK+GTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY
Sbjct:   46 EISEAFEVLGDDKKKKLYDQFGEAGLGPGVGXXXXXXXXXSGMPFTRSRG------ASPFGXXXXXXXXXXXXXXXXXXXXXX-FHGSDPFSIFESMFGTGDINEAVGREGFPMGAGLNGMRMGGMGGGFXXXXPAXXXXXXXXXXRRQAPPVEHCLNLSLEELYQGSSKRMRITKKTSTGEAQVDKTITIKPGWKNGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 339          
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A836CDH0_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH0_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.250e-64
Identity = 142/326 (43.56%), Postives = 189/326 (57.98%), Query Frame = 1
Query:   10 EAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRG--GGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGM------RMGGMGGGFGGGMPAA---------------------GSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRT-STGEAQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            +AFEVLSD +K+KLYD+FGEA + PG     +++E+G P     G   GG  G  P G   TH                     SDP  IFE  FGT D  EA GS GF    G+ GM       MGG GG   G                          GS     AP+ QAP +EH L +SLE+LY G++K+MRIT++T   G A  DK I IKPGWKDGT++T++++GDEQ G++PAD++F+IKTKPH RF R D+DLI    +TL+QAL+G    ++TLDGR++ V+EP L +S+ ET + GEGMPS K+  ++G+L V+Y
Sbjct:  181 QAFEVLSDPEKRKLYDQFGEAAINPG-----AADENGAPGAEFSGFGRGGGMGGMPAGTHFTH---------------------SDPSKIFEQFFGTADPGEA-GSRGFDF-MGMGGMPQGVRMHMGGPGGASAGXXXXXXXXXXXXXXXXXXXXXXSMRHGSQ---SAPQPQAPAIEHQLAVSLEDLYSGTTKKMRITRKTLDGGTASTDKEIKIKPGWKDGTRVTFERQGDEQAGVVPADVMFIIKTKPHDRFKRIDNDLIYEANVTLQQALSGVDTVLETLDGRRLRVSEPFLPSSTYETRITGEGMPSHKNSSIKGDLVVKY 475          
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: L8GLM4_ACACA (DnaJ family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GLM4_ACACA)

HSP 1 Score: 182 bits (462), Expect = 6.890e-52
Identity = 129/311 (41.48%), Postives = 164/311 (52.73%), Query Frame = 1
Query:    1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGGGFG-------GGMPAAGSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRT--STGEAQVDKTI---AIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            E+SEA+EVLSDEKKK LYDRFGE G+  GG  GG                        GG  +  +F+              F+ S P  IF   FG        GS  F   +G N    GG GG +G        G  +     PP+   ++APP+E     +LEELY G+ KRM+ITK    S GE QV + I    +KPGWK+GTKIT+ QEGD+ PG++PADIVF+++ KPHP FTRE  DL+ T  I+L QAL G  + I TLDGR + V    +        V GEGMP QK+   RGNL +R+
Sbjct:   49 EVSEAYEVLSDEKKKDLYDRFGEEGVKAGGAPGG------------------------GGASSAHSFNS-------------FRFSRPEDIFSQFFG--------GSNPFSRSSGRN----GGAGGFYGFDAFGEPEGFDSGFGGFPPRP--QKAPPIERTFGCTLEELYTGTMKRMKITKTITESGGEKQVIEKILELTVKPGWKEGTKITFAQEGDQAPGIIPADIVFILQQKPHPLFTREKSDLVYTANISLTQALCGAELSIVTLDGRTLNVHLRDVIPPGFSKTVPGEGMPDQKNPEKRGNLVIRF 308          
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A8J9RN24_9CHLO (DnaJ homolog subfamily B member 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RN24_9CHLO)

HSP 1 Score: 180 bits (456), Expect = 9.050e-51
Identity = 127/320 (39.69%), Postives = 164/320 (51.25%), Query Frame = 1
Query:    1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGGGFGGGMPAAGSSCPP----------------KAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEAQVDK-----TIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            E+SEAFEVLSD +K+++YD+FGE GL           + GMP     GGGG PG   F      + F+              F GS PF                G  G P    L G   GGM GG G GM A     P                 +A  RQ PP+EH L  +LEELYQG++KRM+I++       + D      +I IKPGWK GTKIT+ ++GDE+PG++PADI+FVI  K HP F RE +DLI T  + L  AL G TI + TLDGR + V+   ++    E  V+GEGMP  K    +G+L VR+
Sbjct:   49 EVSEAFEVLSDPEKRQVYDQFGEEGL-----------KGGMPGNM--GGGGMPGGMHFNATNPEEIFARF------------FGGSSPF----------------GGGGGPGADDLFGSLFGGMPGGRGAGMHAXXGGMPAGXXXXXXXXXXXGMNGRAGPRQDPPMEHQLPCTLEELYQGTTKRMKISRNVMDATGRTDHVTETLSIDIKPGWKKGTKITFPKKGDERPGVIPADIIFVINEKKHPVFEREGNDLIHTAKLPLVDALCGATIKVTTLDGRPLTVSVSDVARPGAEKRVKGEGMPQSKAPGTKGDLRVRF 327          
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A835YSR4_9STRA (DnaJ_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR4_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.090e-50
Identity = 84/153 (54.90%), Postives = 119/153 (77.78%), Query Frame = 1
Query:  442 APPVEHCLNLSLEELYQGSSKRMRITKRT-STGEAQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            AP +EH L +SLE+LY G++K+MRIT++T   G A  DK I IKPGWKDGT++T++++GDEQ G++PAD+VF+IKTKPH RF R D+DLI    +TL+QAL+G    ++TLDGR++ V+EP L +S+ ET + GEGMPS K+  ++G+L V+Y
Sbjct:   95 APAIEHQLAVSLEDLYSGTTKKMRITRKTLDGGTASTDKEIKIKPGWKDGTRVTFERQGDEQAGVVPADVVFIIKTKPHDRFKRVDNDLIYEANVTLQQALSGVDTVLETLDGRRLRVSEPFLPSSTYETRITGEGMPSHKNASIKGDLVVKY 247          
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A7S0SR92_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR92_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.890e-48
Identity = 129/312 (41.35%), Postives = 169/312 (54.17%), Query Frame = 1
Query:    1 EISEAFEVLSDEKKKKLYDRFGEAGLG---PGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVG-SEGFPMGAGLNGMR-MGGMGGGFGGGMPAAGSSCPPKAPRR--QAPPVEHCLNLSLEELYQGSSKRMRITKR------TSTGEAQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            EIS+AFEVLSD +K+K+YD+ GE GL    P G  G S   SGMP                 G   H                  F  S    IF + FGT D   A G S GF   +G  GM  M  MGGG   GMP   ++  P   +   +APPV H L ++LE++Y G  KRMRITK+       ST +  VDK I +KPGWKDGTKIT+++EGDE PG++PADI+F ++TKPH RF R+  DLI    ++L +A +G    I TLD R++++ E     S    +   EGMP+ K Q +RGNL V++
Sbjct:   50 EISQAFEVLSDPEKRKVYDQVGEEGLNGGIPTGADGASFNFSGMPQ----------------GATFH------------------FSHSSADDIFRNFFGTSDPFAAAGESGGFGGSSGFGGMPFMASMGGG---GMPRGFTNIRPTQSQALTKAPPVNHTLYVTLEDIYTGVLKRMRITKKILDASGVST-QVTVDKEIQVKPGWKDGTKITFEREGDESPGIIPADIIFTLQTKPHDRFERDGDDLIHKCSVSLYEAFSGVRKTIQTLDSRQLVI-EARSVCSDTVKLYPNEGMPNTKKQ-IRGNLKVKF 321          
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: I2CQW5_NANGC (Heat shock protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQW5_NANGC)

HSP 1 Score: 169 bits (429), Expect = 1.220e-47
Identity = 104/234 (44.44%), Postives = 145/234 (61.97%), Query Frame = 1
Query:  256 SDPFSIFESMFGTGDINEAVGSEGFPMGAGLNG--MRMGGMGG---------GFGGGMPAAGSSCPPKA--PRRQAPPVEHCLNLSLEELYQGSS-KRMRITKR---TSTGE---AQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            SDP  IF   FGT    +A G     +G G  G   R+ GMG          G G G      + PP++  P ++A P+E+  N++LE+LY G   K+MRITK+    ++G+     VDK I IK GWK+GTKIT+++EGDE PG++PADIVF++ TKPHPRF RE  DL+    +TLEQALTG  + + TLDGR + V+EP ++  + + ++RGEGMP QK    +GNL V++
Sbjct:   17 SDPADIFAQFFGTSSAFDADGFSFDDLGGGRGGARQRVRGMGXXXXXXXVPFGMGLGXXXGPGASPPRSSGPPKKAEPLEYNFNVTLEDLYTGGKQKKMRITKKIWDAASGKFLHTTVDKEIPIKKGWKNGTKITFEREGDELPGVIPADIVFILNTKPHPRFEREGDDLVYAATVTLEQALTGVEVSVQTLDGRVLKVSEPHVTPGTVK-ILRGEGMPLQKTPGKKGNLRVKF 249          
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: Q9SP09_TOBAC (DnaJ-like protein n=5 Tax=Nicotiana TaxID=4085 RepID=Q9SP09_TOBAC)

HSP 1 Score: 167 bits (422), Expect = 8.180e-46
Identity = 120/309 (38.83%), Postives = 172/309 (55.66%), Query Frame = 1
Query:    1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGG-----GFGGGMPAAGSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEA---QVDK--TIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            +ISEA++VLSD +K+ +YD++GE GL           + G+P     G GG  G SPF        FS              F       IF   FG    +   G      GAG  G R GGM G      FG G    G+S    APR++AP ++  L  +LE+LY+G++K+M+I++  +       QV++  TI IKPGWK GTKIT++++G+EQPG++PAD+VF+I  KPH  F+R+ +DLI T  I+L +ALTG T+ + TLDGR + +    +   + E VV GEGMP  KD   +GNL +++
Sbjct:   49 QISEAYDVLSDSQKRAVYDQYGEDGL-----------KGGVPPP---GAGGPGGGSPF--------FSTGEGPQSFR-----FNTRSADDIFAEFFG---FSSPFG------GAGGRGPRFGGMFGDDMFASFGEGGGGGGASMYQSAPRKEAP-IQQNLPCNLEDLYKGTTKKMKISREVADASGKRMQVEEILTINIKPGWKKGTKITFQEKGNEQPGVIPADLVFIIDEKPHRVFSRDGNDLIVTQKISLVEALTGTTVQLTTLDGRNLTIPVNSVIQPNYEHVVPGEGMPLPKDPTKKGNLRIKF 320          
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: Q20774_CAEEL (J domain-containing protein n=6 Tax=Caenorhabditis TaxID=6237 RepID=Q20774_CAEEL)

HSP 1 Score: 166 bits (420), Expect = 1.230e-45
Identity = 120/308 (38.96%), Postives = 157/308 (50.97%), Query Frame = 1
Query:    1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGM-----RMGGMGGGFGGGMPAAGSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEAQ--VDK--TIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            EI+EA++VLSD+KKKK+YD+FGE GL  GG                      PGA     XX H  F                   DP +IF S FG  D   A G   F +G G           GGM  G  GGM   G     +   RQ P V H L++SLE++ +G++K+M+IT++  T  AQ   DK  T+ IKPGWK GTKIT+ +EGD+ P   PADIVFVIK KPHP+F RE  D+     I+L+ ALTG  I I TLDG    +    +        + G+G+P+ K    RG+L + +
Sbjct:   47 EIAEAYDVLSDDKKKKIYDQFGEEGLKEGG----------------------PGAXXXXXXXMHYEFR-----------------GDPMNIFSSFFGGSDPFGAGGPGMFDLGGGXXXXXXXXXNQGGMDDGMFGGMHQGGR----RGHARQDPAVLHDLSVSLEDVLKGTTKKMKITRKVMTDNAQRLEDKVLTVTIKPGWKSGTKITFPKEGDQHPNRTPADIVFVIKDKPHPKFKREGSDIKRVEKISLKSALTGLDIMIPTLDGADYRLQLNDVIKPGTTRRLTGKGLPNPKSPSHRGDLIIEF 311          
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A803QH53_CANSA (J domain-containing protein n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QH53_CANSA)

HSP 1 Score: 166 bits (421), Expect = 1.330e-45
Identity = 113/305 (37.05%), Postives = 168/305 (55.08%), Query Frame = 1
Query:    1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGGGFGGGMPAA-GSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEAQ---VDK--TIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
            +ISEA+EVLSD +K+ +YD++GE GL           +  +P   + GG       P GG    QT                F   +   IF   FG+      +G  G     G+ G R    GG FG  + +A G   P     R+APP+E+ L  SLEELY+G++K+M+I++  +    +   V++  +I IKPGWK GTKIT+ ++G+EQP ++PAD+VF+I  KPH  F R+ +DL+ T  I+L +ALTG+T+ + TLDGR + +    + + + E VV  EGMP  KD   RGNL +++
Sbjct:   49 QISEAYEVLSDPQKRAIYDQYGEEGL-----------KGQVPPPDAAGG------FPGGGTTFFQTGDGPNVFR--------FNPRNANDIFAEFFGSSSPFGGMGGGGSGFPGGMRGSRS--FGGVFGDDIFSAFGDGRPMSQSPRKAPPIENTLPCSLEELYKGTTKKMKISREIADASGKTMPVEEILSIVIKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHSTFARDGNDLVVTQRISLAEALTGYTVNLTTLDGRNLTIPINSVISPNYEEVVPKEGMPLPKDPSKRGNLRIKF 326          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY6_ECTSI7.150e-15184.72Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CDH0_9STRA3.250e-6443.56J domain-containing protein n=1 Tax=Tribonema minu... [more]
L8GLM4_ACACA6.890e-5241.48DnaJ family protein n=1 Tax=Acanthamoeba castellan... [more]
A0A8J9RN24_9CHLO9.050e-5139.69DnaJ homolog subfamily B member 4 n=1 Tax=Coccomyx... [more]
A0A835YSR4_9STRA1.090e-5054.90DnaJ_C domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S0SR92_9STRA1.890e-4841.35Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
I2CQW5_NANGC1.220e-4744.44Heat shock protein (Fragment) n=1 Tax=Nannochlorop... [more]
Q9SP09_TOBAC8.180e-4638.83DnaJ-like protein n=5 Tax=Nicotiana TaxID=4085 Rep... [more]
Q20774_CAEEL1.230e-4538.96J domain-containing protein n=6 Tax=Caenorhabditis... [more]
A0A803QH53_CANSA1.330e-4537.05J domain-containing protein n=2 Tax=Cannabis sativ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11140contigE-fasciculatus_F_contig11140:17..4025 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score171.4
Seed ortholog evalue6.4e-40
Seed eggNOG ortholog4096.XP_009773811.1
KEGG koko:K09510
GOsGO:0000226,GO:0001578,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006996,GO:0007010,GO:0007017,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0032838,GO:0035082,GO:0036126,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0060271,GO:0070925,GO:0071840,GO:0097014,GO:0097223,GO:0097224,GO:0097729,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1904158
EggNOG free text desc.DnaJ C terminal domain
EggNOG OGs37KKV@33090,3GCCP@35493,44NWU@71274,COG0484@1,KOG0714@2759
COG Functional cat.O
Best tax levelasterids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHeat shock protein 40
Ec32 orthologEc-12_003870.1
Exons5
Model size897
Cds size897
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11140.909.1prot_E-fasciculatus_F_contig11140.909.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11140 17..4025 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927619.6121225-CDS-E-fasciculatus_F_contig11140:16..3261622927619.6121225-CDS-E-fasciculatus_F_contig11140:16..326Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 17..326 +
1695995622.5402842-CDS-E-fasciculatus_F_contig11140:16..3261695995622.5402842-CDS-E-fasciculatus_F_contig11140:16..326Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 17..326 +
1622927619.6236367-CDS-E-fasciculatus_F_contig11140:1521..17361622927619.6236367-CDS-E-fasciculatus_F_contig11140:1521..1736Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 1522..1736 +
1695995622.5526977-CDS-E-fasciculatus_F_contig11140:1521..17361695995622.5526977-CDS-E-fasciculatus_F_contig11140:1521..1736Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 1522..1736 +
1622927619.6401155-CDS-E-fasciculatus_F_contig11140:2610..27281622927619.6401155-CDS-E-fasciculatus_F_contig11140:2610..2728Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 2611..2728 +
1695995622.5640888-CDS-E-fasciculatus_F_contig11140:2610..27281695995622.5640888-CDS-E-fasciculatus_F_contig11140:2610..2728Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 2611..2728 +
1622927619.6569252-CDS-E-fasciculatus_F_contig11140:3216..33181622927619.6569252-CDS-E-fasciculatus_F_contig11140:3216..3318Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 3217..3318 +
1695995622.5779421-CDS-E-fasciculatus_F_contig11140:3216..33181695995622.5779421-CDS-E-fasciculatus_F_contig11140:3216..3318Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 3217..3318 +
1622927619.6745667-CDS-E-fasciculatus_F_contig11140:3873..40251622927619.6745667-CDS-E-fasciculatus_F_contig11140:3873..4025Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 3874..4025 +
1695995622.589533-CDS-E-fasciculatus_F_contig11140:3873..40251695995622.589533-CDS-E-fasciculatus_F_contig11140:3873..4025Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11140 3874..4025 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11140.909.1

>prot_E-fasciculatus_F_contig11140.909.1 ID=prot_E-fasciculatus_F_contig11140.909.1|Name=mRNA_E-fasciculatus_F_contig11140.909.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=299bp
EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGG
GRPGASPFGGGGTHQTFSFSTGGGGGGGSGGGFQGSDPFSIFESMFGTGD
INEAVGSEGFPMGAGLNGMRMGGMGGGFGGGMPAAGSSCPPKAPRRQAPP
VEHCLNLSLEELYQGSSKRMRITKRTSTGEAQVDKTIAIKPGWKDGTKIT
YKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGF
TIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY
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mRNA from alignment at E-fasciculatus_F_contig11140:17..4025+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11140.909.1 ID=mRNA_E-fasciculatus_F_contig11140.909.1|Name=mRNA_E-fasciculatus_F_contig11140.909.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4009bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11140:17..4025+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAAATCAGCGAAGCCTTCGAAGTGTTGAGCGACGAGAAGAAGAAGAAGCT CTATGACCGGTTCGGCGAGGCTGGCCTTGGCCCCGGCGGGGGAAGCGGAG GGTCTTCGGAGGAAAGCGGCATGCCCTTCACGCGGTCGCGCGGTGGGGGG GGGCGACCGGGAGCCTCGCCGTTCGGCGGGGGAGGGACTCACCAGACCTT TTCGTTCAGCACGGGCGGCGGCGGCGGCGGCGGCAGCGGCGGAGGGTTCC AGGGAAGCGACCCTTTCAGCATCTTCGAGTCCATGTTCGGGACCGGAGAC ATCAACGAAGGTAGGTGTGGTGCGCAAAAATGATGTGTGTGAAAATGATG TGTGTGTTGCTCTTTGTCAGGTGTGCGTTGCTTCAACAAGACGCTCCACT TATTAGCTGCTGATGCCGGTTCTCTTTTTCTATTGTTCTCTTCTCCCACC ACCCACAGCAGTGAATAGCGGGTGTGCCTTGAAACGGTGCGGTAAGCCAG GCACGCCCTCGGTGGCGGCTGCAAGTAGATGTAACTTGTGCGTTTTCTCG GAACCTCCACCTTGCATGCTTCGCTCAACGCGCGGGTACAGCAGTACTGC TGTACCACTTTTTTTGATAGAGCCAGCACGCGTGGTCATGATCGTCTCCG TTTCTCCTCGCTACACGTGCAGGCCCCGCATGGCTTGAGTCTTTTGTTGA AGCTACGAAACTCACCAAGCGACACGATCGCAGCCGCTGTTGCTCTGACT CTAAGGAATGCCAACACCTAGGAGACTCCGGGCGGACAATGGCACTCAAT ACTGTAGTTGAATACGAAACACTCTGTCAGCACATCCAGTATAGTCTAGG TCTCTACCCGTCATGCGTAGGAGGGGGGCACTTGATGTCTTGATGTTGAT GTCCTCCTGTATCTGTGCGATTTCATCAACCCCTACCCATTAGACGATCG GGTACAGCAGCAGTGTACATCGGACGAGGGGGGGTGGGGTACAAGACAAA TGCACGATGTTGTAGTACCCACAAGTTCGAGAAGCTGAAACTCCGGACAA CGCACTCTTAACTTGCTGAAATCCCCCGATGTTGGTTCATAGGCATGCGT TTACTTTAGGCAACCGGCCGACTCCCTTTCGCCAACGTCGCGCTCTATGT GTAGCACGACCTTTGGCCTCTTACCGGTAACAAGGTCAGCACATTATAAC AATGCGGCGTATTCCAATCCCCTTGTTGTTGTCTTGAAGTTTATGCTGCT CTGCTCTATTGTGTTGTCGTCGTTGTGCCTGTCGTAGATTCTCACCAGTA TTGTACTGATCTGGCCCGCCACATTTTTCTGTTGTCCGCTTTCCGCCCCT TCCTCCCCATGTAAATTTCCCCCTATTTCAATAAAACGTCATGTTCCTCG ACTACTAACCCTAACCCTAACCCTACTAAGCGACAACTTTACACCCACCG CCGTGTGTGTATTATTTTCCCCGCAAACGAAAATCGACCATACCAAAAAT CTCAGCCGTCGGCAGCGAGGGCTTCCCGATGGGGGCGGGCTTGAACGGGA TGCGAATGGGCGGCATGGGTGGTGGGTTCGGTGGCGGCATGCCGGCGGCG GGCTCTTCTTGCCCTCCGAAGGCGCCGAGGCGCCAGGCGCCGCCGGTGGA GCACTGCCTGAACCTGTCGCTGGAGGAGCTGTACCAGGGGTCCTCGAAGC GGATGAGGATCACCAAGAGGGTGAGAGTGAGAGATGTGGATGGGATGGAT GGCATGGGAGACGTGGCATGGTGCAGCAGTAATAGCTTAACGTGTCTCTT TGTGGGTGGGTGAGGGAAGGCAAGCAGCTTACAATTACCATTTCGTTAAT CGGCGCTGACCGCGCCGACATGCTGAGCTCTGGAAGACGTGGATTTTAGC GGACAAGTATGAAGCCCCCAAAAGAGATTTCTTGCCCGCGGACTTCCTTC GAGGGGCTGTGCGTTTGTGTATTAAAGATGAAATGCATTTTCTTGTTTTT CCATGACAGCCATGTTTGCTGTACATGTGTGAGTTTTCGGGGCTTGACCC TTCTTGTTCCCTTCGCGTGGGGGTACTCTCCGTTTTTTTTGTTTTTTTTT CCAGTAGTTTGAAGGTGCTGTGAAGCTGCCTTTCTTGTTGGGTGTTGCTT CTGTCTCTGTCTCTCGCCACTCGGACCTGGGCGTATGTCTTGCCTATTTT TTTTTGTGTATTGTAGCTGCCTCTGTCCCGAATAAGTTGGGCTCCTATCT GGGTATCTAGCTGGACCTGCTCCCCCCACGGTGTTGTGTTCTTGTTGGTT GATCGTATGATCGGTTCCTCAGTATGCTCTTGTTGAACGGATAGCCAGTT GTTTTGCCTCACCTCACCCAGCAGAACACTTACTTCCGCCGTCCCGAAAG ATGCTAAATACCGCTTTCGAGTACAATACAAGCGAGATGAAACGACGACA CCCCCCTTGCACCGCTTGTCAGCACGTATGCATACATGCCGCCTCTCACA CACACACCCTCCGTGTTCTCCTTCCGTTCCGACAAAAAAAACAAAATGAC ACGATCGAACGAACAAACCGACCGCTTGGGGTGATGATGGGCAGACCTCA ACCGGGGAGGCGCAAGTCGATAAGACGATCGCCATCAAGCCCGGCTGGAA GGATGGGACGAAGATCACCTACAAGCAGGAGGGTGACGAGCAACCAGGCA TGCTCCCGGCCGGTGAGTGTTTTTTTTTTGTCGTTTTTTAAGCTTGTGCG TCTTTTTTTTTTGTCTCAGGCTCGATTTGCAGCGAGATCGCGTGACCGTG CAGTAGGTCTGTTTTAACCTTCGTAGGACTGTTGTAACGTCGGAAATGAC TTGCTACTCACATCATGTGTGTGTTGGTATAATAGTAATAGTGTCTATGC ATCGATCAGCTTTTTCTTTATGTCGTGCTCGGCTTGTGTCTTCATGTCTT CCGATTGAAAGCTTTCGGCGCTGTCGGAGGCACGTGCGCTAAGCACCCTC CCTTCCCCTCCCCTCCCCAAACGTCTGTTGACTCCGGCGCTGTCTAGATA CACCGGGCCAGGTATCTACAATCAGTCGCGGGGATGTTGCAGGGTCCCCT TGCATCCACGCCATGTTGTCCTTCTCATCCCTTCCGCGTGTTTTTTTTTG TGCGCCCCTCTGTGCGTCGAAACCTCACCCCACTTGTTTTCGCCCGGCAG ACATTGTATTCGTGATCAAGACCAAGCCTCACCCCAGGTTCACGAGGGAG GATCATGACCTCATCTGCACCGTCATCATCACGCTGGAGCAGGCGTTGAC AGGTGGGTGCAAACAAGGCTATAATAGTACTGTGTGCCGTCTGCCCAGTT GATATGGCCAATGTACTGTGGTGCGCAGCATGGGTACGAAGAACAAAGAA TAAAAGAACACGTACTGTACTAACGTACACACACGGCGGTTTCGTCGGTA AGACCCATGTCGTTTCGTTGGTCTGGTCGGCCGATTCAAGCGGTCGATGT TGCTGAAAGAAATACACACACATATGCTACACGTACGTGTACGCCCCAAG CTTTCGTTTGCACTTTCTACTTTGAACAGTTCTTCAAAGGTGCAGTCATG TTGGCAATCAAGCTGCGCCTTGTTTTACTCGAAATCTAGAGATTTTCGTT GCGAGTAGATCTGACGTGCGTATATAACTTGGCATGCATAGTGCTACATT GTCGTGCAAGGCCTGTGGATGGGCCGTGGTACAAACGCGCATGGTGTGGT ACACGAGCACGTGACTTTTCCACGCTCACTCACTTGCGTTGACGAACGAG CGAACCAATGGCCAACCGAATGTAACCGCCGAATCAACCAATCAATCCAC TTTGCAGGCTTCACTATCCCGATCGACACCCTCGACGGCAGAAAGGTGAT GGTTACCGAGCCGGGCCTGTCGACGTCCTCCCAGGAGACCGTGGTCCGGG GAGAGGGGATGCCGTCCCAGAAGGACCAAAGAGTGCGAGGGAACCTCACC GTCAGGTAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11140:17..4025+

>mRNA_E-fasciculatus_F_contig11140.909.1 ID=mRNA_E-fasciculatus_F_contig11140.909.1|Name=mRNA_E-fasciculatus_F_contig11140.909.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1794bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11140:17..4025+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAAATCAGCGAAGCCTTCGAAGTGTTGAGCGACGAGAAGAAGAAGAAGCT
CTATGACCGGTTCGGCGAGGCTGGCCTTGGCCCCGGCGGGGGAAGCGGAG
GGTCTTCGGAGGAAAGCGGCATGCCCTTCACGCGGTCGCGCGGTGGGGGG
GGGCGACCGGGAGCCTCGCCGTTCGGCGGGGGAGGGACTCACCAGACCTT
TTCGTTCAGCACGGGCGGCGGCGGCGGCGGCGGCAGCGGCGGAGGGTTCC
AGGGAAGCGACCCTTTCAGCATCTTCGAGTCCATGTTCGGGACCGGAGAC
ATCAACGAAGGAAATCAGCGAAGCCTTCGAAGTGTTGAGCGACGAGAAGA
AGAAGAAGCTCTATGACCGGTTCGGCGAGGCTGGCCTTGGCCCCGGCGGG
GGAAGCGGAGGGTCTTCGGAGGAAAGCGGCATGCCCTTCACGCGGTCGCG
CGGTGGGGGGGGGCGACCGGGAGCCTCGCCGTTCGGCGGGGGAGGGACTC
ACCAGACCTTTTCGTTCAGCACGGGCGGCGGCGGCGGCGGCGGCAGCGGC
GGAGGGTTCCAGGGAAGCGACCCTTTCAGCATCTTCGAGTCCATGTTCGG
GACCGGAGACATCAACGAAGCCGTCGGCAGCGAGGGCTTCCCGATGGGGG
CGGGCTTGAACGGGATGCGAATGGGCGGCATGGGTGGTGGGTTCGGTGGC
GGCATGCCGGCGGCGGGCTCTTCTTGCCCTCCGAAGGCGCCGAGGCGCCA
GGCGCCGCCGGTGGAGCACTGCCTGAACCTGTCGCTGGAGGAGCTGTACC
AGGGGTCCTCGAAGCGGATGAGGATCACCAAGAGGCCGTCGGCAGCGAGG
GCTTCCCGATGGGGGCGGGCTTGAACGGGATGCGAATGGGCGGCATGGGT
GGTGGGTTCGGTGGCGGCATGCCGGCGGCGGGCTCTTCTTGCCCTCCGAA
GGCGCCGAGGCGCCAGGCGCCGCCGGTGGAGCACTGCCTGAACCTGTCGC
TGGAGGAGCTGTACCAGGGGTCCTCGAAGCGGATGAGGATCACCAAGAGG
ACCTCAACCGGGGAGGCGCAAGTCGATAAGACGATCGCCATCAAGCCCGG
CTGGAAGGATGGGACGAAGATCACCTACAAGCAGGAGGGTGACGAGCAAC
CAGGCATGCTCCCGGCCGACCTCAACCGGGGAGGCGCAAGTCGATAAGAC
GATCGCCATCAAGCCCGGCTGGAAGGATGGGACGAAGATCACCTACAAGC
AGGAGGGTGACGAGCAACCAGGCATGCTCCCGGCCGACATTGTATTCGTG
ATCAAGACCAAGCCTCACCCCAGGTTCACGAGGGAGGATCATGACCTCAT
CTGCACCGTCATCATCACGCTGGAGCAGGCGTTGACAGACATTGTATTCG
TGATCAAGACCAAGCCTCACCCCAGGTTCACGAGGGAGGATCATGACCTC
ATCTGCACCGTCATCATCACGCTGGAGCAGGCGTTGACAGGCTTCACTAT
CCCGATCGACACCCTCGACGGCAGAAAGGTGATGGTTACCGAGCCGGGCC
TGTCGACGTCCTCCCAGGAGACCGTGGTCCGGGGAGAGGGGATGCCGTCC
CAGAAGGACCAAAGAGTGCGAGGGAACCTCACCGTCAGGTACGCTTCACT
ATCCCGATCGACACCCTCGACGGCAGAAAGGTGATGGTTACCGAGCCGGG
CCTGTCGACGTCCTCCCAGGAGACCGTGGTCCGGGGAGAGGGGATGCCGT
CCCAGAAGGACCAAAGAGTGCGAGGGAACCTCACCGTCAGGTAC
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