mRNA_E-fasciculatus_F_contig11140.909.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: D8LTY6_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY6_ECTSI) HSP 1 Score: 436 bits (1120), Expect = 7.150e-151 Identity = 255/301 (84.72%), Postives = 259/301 (86.05%), Query Frame = 1
Query: 1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEE--SGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGGGFGGGMPAAGSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEAQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
EISEAFEVL D+KKKKLYD+FGEAGLGPG G SGMPFTRSRG ASPFG XX XXXXXXXXXXXXX F GSDPFSIFESMFGTGDINEAVG EGFPMGAGLNGMRMGGMGGGF PA RRQAPPVEHCLNLSLEELYQGSSKRMRITK+TSTGEAQVDKTI IKPGWK+GTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY
Sbjct: 46 EISEAFEVLGDDKKKKLYDQFGEAGLGPGVGXXXXXXXXXSGMPFTRSRG------ASPFGXXXXXXXXXXXXXXXXXXXXXX-FHGSDPFSIFESMFGTGDINEAVGREGFPMGAGLNGMRMGGMGGGFXXXXPAXXXXXXXXXXRRQAPPVEHCLNLSLEELYQGSSKRMRITKKTSTGEAQVDKTITIKPGWKNGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 339
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A836CDH0_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH0_9STRA) HSP 1 Score: 219 bits (557), Expect = 3.250e-64 Identity = 142/326 (43.56%), Postives = 189/326 (57.98%), Query Frame = 1
Query: 10 EAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRG--GGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGM------RMGGMGGGFGGGMPAA---------------------GSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRT-STGEAQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
+AFEVLSD +K+KLYD+FGEA + PG +++E+G P G GG G P G TH SDP IFE FGT D EA GS GF G+ GM MGG GG G GS AP+ QAP +EH L +SLE+LY G++K+MRIT++T G A DK I IKPGWKDGT++T++++GDEQ G++PAD++F+IKTKPH RF R D+DLI +TL+QAL+G ++TLDGR++ V+EP L +S+ ET + GEGMPS K+ ++G+L V+Y
Sbjct: 181 QAFEVLSDPEKRKLYDQFGEAAINPG-----AADENGAPGAEFSGFGRGGGMGGMPAGTHFTH---------------------SDPSKIFEQFFGTADPGEA-GSRGFDF-MGMGGMPQGVRMHMGGPGGASAGXXXXXXXXXXXXXXXXXXXXXXSMRHGSQ---SAPQPQAPAIEHQLAVSLEDLYSGTTKKMRITRKTLDGGTASTDKEIKIKPGWKDGTRVTFERQGDEQAGVVPADVMFIIKTKPHDRFKRIDNDLIYEANVTLQQALSGVDTVLETLDGRRLRVSEPFLPSSTYETRITGEGMPSHKNSSIKGDLVVKY 475
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: L8GLM4_ACACA (DnaJ family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GLM4_ACACA) HSP 1 Score: 182 bits (462), Expect = 6.890e-52 Identity = 129/311 (41.48%), Postives = 164/311 (52.73%), Query Frame = 1
Query: 1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGGGFG-------GGMPAAGSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRT--STGEAQVDKTI---AIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
E+SEA+EVLSDEKKK LYDRFGE G+ GG GG GG + +F+ F+ S P IF FG GS F +G N GG GG +G G + PP+ ++APP+E +LEELY G+ KRM+ITK S GE QV + I +KPGWK+GTKIT+ QEGD+ PG++PADIVF+++ KPHP FTRE DL+ T I+L QAL G + I TLDGR + V + V GEGMP QK+ RGNL +R+
Sbjct: 49 EVSEAYEVLSDEKKKDLYDRFGEEGVKAGGAPGG------------------------GGASSAHSFNS-------------FRFSRPEDIFSQFFG--------GSNPFSRSSGRN----GGAGGFYGFDAFGEPEGFDSGFGGFPPRP--QKAPPIERTFGCTLEELYTGTMKRMKITKTITESGGEKQVIEKILELTVKPGWKEGTKITFAQEGDQAPGIIPADIVFILQQKPHPLFTREKSDLVYTANISLTQALCGAELSIVTLDGRTLNVHLRDVIPPGFSKTVPGEGMPDQKNPEKRGNLVIRF 308
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A8J9RN24_9CHLO (DnaJ homolog subfamily B member 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RN24_9CHLO) HSP 1 Score: 180 bits (456), Expect = 9.050e-51 Identity = 127/320 (39.69%), Postives = 164/320 (51.25%), Query Frame = 1
Query: 1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGGGFGGGMPAAGSSCPP----------------KAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEAQVDK-----TIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
E+SEAFEVLSD +K+++YD+FGE GL + GMP GGGG PG F + F+ F GS PF G G P L G GGM GG G GM A P +A RQ PP+EH L +LEELYQG++KRM+I++ + D +I IKPGWK GTKIT+ ++GDE+PG++PADI+FVI K HP F RE +DLI T + L AL G TI + TLDGR + V+ ++ E V+GEGMP K +G+L VR+
Sbjct: 49 EVSEAFEVLSDPEKRQVYDQFGEEGL-----------KGGMPGNM--GGGGMPGGMHFNATNPEEIFARF------------FGGSSPF----------------GGGGGPGADDLFGSLFGGMPGGRGAGMHAXXGGMPAGXXXXXXXXXXXGMNGRAGPRQDPPMEHQLPCTLEELYQGTTKRMKISRNVMDATGRTDHVTETLSIDIKPGWKKGTKITFPKKGDERPGVIPADIIFVINEKKHPVFEREGNDLIHTAKLPLVDALCGATIKVTTLDGRPLTVSVSDVARPGAEKRVKGEGMPQSKAPGTKGDLRVRF 327
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A835YSR4_9STRA (DnaJ_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR4_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.090e-50 Identity = 84/153 (54.90%), Postives = 119/153 (77.78%), Query Frame = 1
Query: 442 APPVEHCLNLSLEELYQGSSKRMRITKRT-STGEAQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
AP +EH L +SLE+LY G++K+MRIT++T G A DK I IKPGWKDGT++T++++GDEQ G++PAD+VF+IKTKPH RF R D+DLI +TL+QAL+G ++TLDGR++ V+EP L +S+ ET + GEGMPS K+ ++G+L V+Y
Sbjct: 95 APAIEHQLAVSLEDLYSGTTKKMRITRKTLDGGTASTDKEIKIKPGWKDGTRVTFERQGDEQAGVVPADVVFIIKTKPHDRFKRVDNDLIYEANVTLQQALSGVDTVLETLDGRRLRVSEPFLPSSTYETRITGEGMPSHKNASIKGDLVVKY 247
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A7S0SR92_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR92_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.890e-48 Identity = 129/312 (41.35%), Postives = 169/312 (54.17%), Query Frame = 1
Query: 1 EISEAFEVLSDEKKKKLYDRFGEAGLG---PGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVG-SEGFPMGAGLNGMR-MGGMGGGFGGGMPAAGSSCPPKAPRR--QAPPVEHCLNLSLEELYQGSSKRMRITKR------TSTGEAQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
EIS+AFEVLSD +K+K+YD+ GE GL P G G S SGMP G H F S IF + FGT D A G S GF +G GM M MGGG GMP ++ P + +APPV H L ++LE++Y G KRMRITK+ ST + VDK I +KPGWKDGTKIT+++EGDE PG++PADI+F ++TKPH RF R+ DLI ++L +A +G I TLD R++++ E S + EGMP+ K Q +RGNL V++
Sbjct: 50 EISQAFEVLSDPEKRKVYDQVGEEGLNGGIPTGADGASFNFSGMPQ----------------GATFH------------------FSHSSADDIFRNFFGTSDPFAAAGESGGFGGSSGFGGMPFMASMGGG---GMPRGFTNIRPTQSQALTKAPPVNHTLYVTLEDIYTGVLKRMRITKKILDASGVST-QVTVDKEIQVKPGWKDGTKITFEREGDESPGIIPADIIFTLQTKPHDRFERDGDDLIHKCSVSLYEAFSGVRKTIQTLDSRQLVI-EARSVCSDTVKLYPNEGMPNTKKQ-IRGNLKVKF 321
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: I2CQW5_NANGC (Heat shock protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQW5_NANGC) HSP 1 Score: 169 bits (429), Expect = 1.220e-47 Identity = 104/234 (44.44%), Postives = 145/234 (61.97%), Query Frame = 1
Query: 256 SDPFSIFESMFGTGDINEAVGSEGFPMGAGLNG--MRMGGMGG---------GFGGGMPAAGSSCPPKA--PRRQAPPVEHCLNLSLEELYQGSS-KRMRITKR---TSTGE---AQVDKTIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
SDP IF FGT +A G +G G G R+ GMG G G G + PP++ P ++A P+E+ N++LE+LY G K+MRITK+ ++G+ VDK I IK GWK+GTKIT+++EGDE PG++PADIVF++ TKPHPRF RE DL+ +TLEQALTG + + TLDGR + V+EP ++ + + ++RGEGMP QK +GNL V++
Sbjct: 17 SDPADIFAQFFGTSSAFDADGFSFDDLGGGRGGARQRVRGMGXXXXXXXVPFGMGLGXXXGPGASPPRSSGPPKKAEPLEYNFNVTLEDLYTGGKQKKMRITKKIWDAASGKFLHTTVDKEIPIKKGWKNGTKITFEREGDELPGVIPADIVFILNTKPHPRFEREGDDLVYAATVTLEQALTGVEVSVQTLDGRVLKVSEPHVTPGTVK-ILRGEGMPLQKTPGKKGNLRVKF 249
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: Q9SP09_TOBAC (DnaJ-like protein n=5 Tax=Nicotiana TaxID=4085 RepID=Q9SP09_TOBAC) HSP 1 Score: 167 bits (422), Expect = 8.180e-46 Identity = 120/309 (38.83%), Postives = 172/309 (55.66%), Query Frame = 1
Query: 1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGG-----GFGGGMPAAGSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEA---QVDK--TIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
+ISEA++VLSD +K+ +YD++GE GL + G+P G GG G SPF FS F IF FG + G GAG G R GGM G FG G G+S APR++AP ++ L +LE+LY+G++K+M+I++ + QV++ TI IKPGWK GTKIT++++G+EQPG++PAD+VF+I KPH F+R+ +DLI T I+L +ALTG T+ + TLDGR + + + + E VV GEGMP KD +GNL +++
Sbjct: 49 QISEAYDVLSDSQKRAVYDQYGEDGL-----------KGGVPPP---GAGGPGGGSPF--------FSTGEGPQSFR-----FNTRSADDIFAEFFG---FSSPFG------GAGGRGPRFGGMFGDDMFASFGEGGGGGGASMYQSAPRKEAP-IQQNLPCNLEDLYKGTTKKMKISREVADASGKRMQVEEILTINIKPGWKKGTKITFQEKGNEQPGVIPADLVFIIDEKPHRVFSRDGNDLIVTQKISLVEALTGTTVQLTTLDGRNLTIPVNSVIQPNYEHVVPGEGMPLPKDPTKKGNLRIKF 320
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: Q20774_CAEEL (J domain-containing protein n=6 Tax=Caenorhabditis TaxID=6237 RepID=Q20774_CAEEL) HSP 1 Score: 166 bits (420), Expect = 1.230e-45 Identity = 120/308 (38.96%), Postives = 157/308 (50.97%), Query Frame = 1
Query: 1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGM-----RMGGMGGGFGGGMPAAGSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEAQ--VDK--TIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
EI+EA++VLSD+KKKK+YD+FGE GL GG PGA XX H F DP +IF S FG D A G F +G G GGM G GGM G + RQ P V H L++SLE++ +G++K+M+IT++ T AQ DK T+ IKPGWK GTKIT+ +EGD+ P PADIVFVIK KPHP+F RE D+ I+L+ ALTG I I TLDG + + + G+G+P+ K RG+L + +
Sbjct: 47 EIAEAYDVLSDDKKKKIYDQFGEEGLKEGG----------------------PGAXXXXXXXMHYEFR-----------------GDPMNIFSSFFGGSDPFGAGGPGMFDLGGGXXXXXXXXXNQGGMDDGMFGGMHQGGR----RGHARQDPAVLHDLSVSLEDVLKGTTKKMKITRKVMTDNAQRLEDKVLTVTIKPGWKSGTKITFPKEGDQHPNRTPADIVFVIKDKPHPKFKREGSDIKRVEKISLKSALTGLDIMIPTLDGADYRLQLNDVIKPGTTRRLTGKGLPNPKSPSHRGDLIIEF 311
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Match: A0A803QH53_CANSA (J domain-containing protein n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QH53_CANSA) HSP 1 Score: 166 bits (421), Expect = 1.330e-45 Identity = 113/305 (37.05%), Postives = 168/305 (55.08%), Query Frame = 1
Query: 1 EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGGRPGASPFGGXXTHQTFSXXXXXXXXXXXXXGFQGSDPFSIFESMFGTGDINEAVGSEGFPMGAGLNGMRMGGMGGGFGGGMPAA-GSSCPPKAPRRQAPPVEHCLNLSLEELYQGSSKRMRITKRTSTGEAQ---VDK--TIAIKPGWKDGTKITYKQEGDEQPGMLPADIVFVIKTKPHPRFTREDHDLICTVIITLEQALTGFTIPIDTLDGRKVMVTEPGLSTSSQETVVRGEGMPSQKDQRVRGNLTVRY 897
+ISEA+EVLSD +K+ +YD++GE GL + +P + GG P GG QT F + IF FG+ +G G G+ G R GG FG + +A G P R+APP+E+ L SLEELY+G++K+M+I++ + + V++ +I IKPGWK GTKIT+ ++G+EQP ++PAD+VF+I KPH F R+ +DL+ T I+L +ALTG+T+ + TLDGR + + + + + E VV EGMP KD RGNL +++
Sbjct: 49 QISEAYEVLSDPQKRAIYDQYGEEGL-----------KGQVPPPDAAGG------FPGGGTTFFQTGDGPNVFR--------FNPRNANDIFAEFFGSSSPFGGMGGGGSGFPGGMRGSRS--FGGVFGDDIFSAFGDGRPMSQSPRKAPPIENTLPCSLEELYKGTTKKMKISREIADASGKTMPVEEILSIVIKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHSTFARDGNDLVVTQRISLAEALTGYTVNLTTLDGRNLTIPINSVISPNYEEVVPKEGMPLPKDPSKRGNLRIKF 326 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11140.909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11140.909.1 >prot_E-fasciculatus_F_contig11140.909.1 ID=prot_E-fasciculatus_F_contig11140.909.1|Name=mRNA_E-fasciculatus_F_contig11140.909.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=299bp EISEAFEVLSDEKKKKLYDRFGEAGLGPGGGSGGSSEESGMPFTRSRGGGback to top mRNA from alignment at E-fasciculatus_F_contig11140:17..4025+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11140.909.1 ID=mRNA_E-fasciculatus_F_contig11140.909.1|Name=mRNA_E-fasciculatus_F_contig11140.909.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4009bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11140:17..4025+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11140:17..4025+ >mRNA_E-fasciculatus_F_contig11140.909.1 ID=mRNA_E-fasciculatus_F_contig11140.909.1|Name=mRNA_E-fasciculatus_F_contig11140.909.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1794bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11140:17..4025+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |