mRNA_E-fasciculatus_F_contig11128.896.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI) HSP 1 Score: 317 bits (811), Expect = 2.610e-103 Identity = 172/274 (62.77%), Postives = 199/274 (72.63%), Query Frame = 1
Query: 10 KREMGIFVKTHTGKTIMIGAFPSETVLDIKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNIQSAATLQSFLPLRGGKPVILLYPPAPVDATVTLELKPLWSFSALYPK-PPSNKLQQAGPHP-----------KCKWHVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGLDDTRSFCVAGDAAGRYVPDWLCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAFR 795
+ E+ +KT TGK I AFPSETVLD+K+K++ ++G C QR++YAG D RTLR NI++ + L LR KPVILLYPPAPVD TV +EL PLWSFS+LYPK P N Q A + +CKW+VHASP GSL+DLSTGREYPYLFWEADSSDGRV+RSFGLD +RSFCVAG+AAG VFLD ALERLGLN+RERCDMVT WLPQLESS FN+IYFV+VERYE+ ARLTI P PDVTIRVFMAFR
Sbjct: 155 ENEISFSIKTLTGKQHTIRAFPSETVLDVKKKVQD-----TQGIPC-EQQRIIYAGQQTSDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVDITVAVELSPLWSFSSLYPKLQPRNLKQLAADYEAGSQANVAGGQQCKWNVHASPGGSLKDLSTGREYPYLFWEADSSDGRVTRSFGLDGSRSFCVAGEAAG--------VFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFR 412
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: A0A8H8JUU4_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JUU4_9AGAM) HSP 1 Score: 177 bits (450), Expect = 1.720e-49 Identity = 113/273 (41.39%), Postives = 142/273 (52.01%), Query Frame = 1
Query: 19 MGIFVKTHTGKTIMIGAFPSETVLDIKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNIQSAATLQSFLPLRGGKPVILLYPPAPV-DATVTLELKPLWSFSALYPKPPSNKLQQAGPHPKCKWHVHASPDGSLEDLSTGREYPYLFWEADSSDGR------------VSRSFGLDDTRSFCVAGDAAGRYVP-DWLCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAFR 795
M +FVKT TGKTI + A+ S+T+ IK K++ + QRL++AG LEDG L YNIQ +TL L LRGGKPVI L+PP P D + L L W FS LYP P+ + A W V A PD +L D +TGRE YLFWEA S+ V F D R D+ +P D + ++D AL LGL+ RC +TYWLP L+ + + F+ YE ARL I P PDVT RVFM FR
Sbjct: 120 MTLFVKTLTGKTITVYAYRSDTIDCIKAKIQDREGIPPD------QQRLIFAGKQLEDGLMLIDYNIQDNSTLHLVLRLRGGKPVIYLFPPIPTSDIRIELALTKRWGFSVLYP--PAAISRTADDGQSVLWTVDAKPDSTLFDRATGREVSYLFWEAHSNSTELPSPACTRACTPVEDIFPFDPARPSLTPADSV--VLPLDKVTEYIDDALLSLGLHTEARCSFITYWLPDLQRHQYIALRFLPQPDYEAAARLNITPIPDVTTRVFMLFR 382
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: A0A8H8MML9_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MML9_9AGAM) HSP 1 Score: 171 bits (434), Expect = 2.190e-48 Identity = 108/273 (39.56%), Postives = 142/273 (52.01%), Query Frame = 1
Query: 19 MGIFVKTHTGKTIMIGAFPSETVLDIKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNIQSAATLQSFLPLRGGKPVILLYPPAPVDAT-VTLELKPLWSFSALYPKPPSNKLQQAGPHPKCKWHVHASPDGSLEDLSTGREYPYLFWEADSSDG-----RVSR--------SFGLDDTRSFCVAGDAAGRYVPDWLCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAFR 795
M + VKT TGKTI + S+TV ++K K++ E QRL++AG +EDGRTL YNI T+ LRGGKPV+ L+PP P ++ V L L P WSFSALYP P AG W V A PDG+L D TGRE YLFWEA ++ VSR + D +R + D + + + ++D L LGL+ RC +TYWLP L+ + F+ YE A + + P+PDVT RVFM FR
Sbjct: 1 MQLIVKTLTGKTIWVEVETSDTVDNVKAKIQDKEGILPEV------QRLIFAGKQMEDGRTLSDYNILKQRTIHVVTRLRGGKPVVYLFPPLPTNSIRVDLALTPAWSFSALYPSAPVRPT--AGDGHSVAWIVDAKPDGTLSDHGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQEVAATFDPSRPV-ITPDNSTVLPFEKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFR 264
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: A0A8H8MJY2_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MJY2_9AGAM) HSP 1 Score: 171 bits (434), Expect = 2.190e-48 Identity = 107/273 (39.19%), Postives = 142/273 (52.01%), Query Frame = 1
Query: 19 MGIFVKTHTGKTIMIGAFPSETVLDIKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNIQSAATLQSFLPLRGGKPVILLYPPAPVD-ATVTLELKPLWSFSALYPKPPSNKLQQAGPHPKCKWHVHASPDGSLEDLSTGREYPYLFWEADSSDG-----RVSR--------SFGLDDTRSFCVAGDAAGRYVPDWLCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAFR 795
M ++VKT TGK I S+T+ ++K K++ + QRLL+AG +EDGRTL YNIQ +T+ LRGGKPV+ L+PP P + + L L P WSFSALYP P AG W V A PDG+L D TGRE YLFWEA ++ VSR + D +R + D + D + ++D L LGL+ RC +TYWLP L+ + F+ YE A + + P+PDVT RVFM FR
Sbjct: 1 MQLYVKTLTGKKTTIEVESSDTIDNVKAKIQDKDGVPPD------QQRLLFAGKQMEDGRTLSDYNIQRESTVILVYRLRGGKPVVYLFPPLPTNNVRIDLALTPAWSFSALYPSVPVRPT--AGDGQSVAWIVDAKPDGTLSDHGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQEVASTFDPSRPV-ITPDNSTVLPFDKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFR 264
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: A0A8H8J338_9AGAM (Ubiquitin family protein n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8J338_9AGAM) HSP 1 Score: 170 bits (430), Expect = 8.640e-48 Identity = 106/274 (38.69%), Postives = 142/274 (51.82%), Query Frame = 1
Query: 19 MGIFVKTHTGKTIMIGAFPSETVLDIKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNIQSAATLQSFLPLRGGKPVILLYPPAPVDAT-VTLELKPLWSFSALYPKPPSNKLQQAGPHPKCKWHVHASPDGSLEDLSTGREYPYLFWEADSSDG-----RVSR--------SFGLDDTRSFCVAGDAAGRYVP-DWLCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAFR 795
M ++VKT TGKTI + S+T+ ++K K++ E QRL++AG +ED TL YNIQ T+ LRGGKPV+ L+PP P + V L L P WSFSALYP ++ AG W V A PDG+L D TGRE YLFWEA ++ VSR + D +R ++ +P D ++D L LGL+ RC +TYWLP L+ + F+ YE A + + P+PDVT RVFM FR
Sbjct: 1 MQVYVKTLTGKTITLEVESSDTIANVKAKIQDKEGYPPE------QQRLMFAGKQIEDDCTLGDYNIQKEYTIHFVSTLRGGKPVVYLFPPLPTNRIRVDLALAPAWSFSALYPS--ASVRPTAGGGQSVAWIVDAKPDGTLSDRGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQEVAATFDPSRPVITPDNST--VIPFDKATGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFR 264
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: A0A2H3CQT3_ARMGA (Ubiquitin-domain-containing protein n=1 Tax=Armillaria gallica TaxID=47427 RepID=A0A2H3CQT3_ARMGA) HSP 1 Score: 160 bits (406), Expect = 2.250e-43 Identity = 104/286 (36.36%), Postives = 145/286 (50.70%), Query Frame = 1
Query: 7 PKREMGIFVKTHTGKTI-MIGAFPSETVLD-IKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNIQSAATLQSFLPLRGGKPVILLYPPAPVDATVTLELKPLWSFSALYPKPPSNKLQQAGPHPKCKWHVHASPDGSLEDLSTGREYPYLFWEADSS----------------DGRVSRSF-----GLDDTRSFCVAGDAAGRYVPDWLCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAFR 795
P R M I VKT TGKTI ++G + T +D +K ++ + QRL++AG LEDGR+L Y I + AT+ L LRG KPVI L+ P P++ATV L L WSFSA+YP P K ++G +W+V+ D ++ D+++G YLFWEA+++ D + F GL DT S + Y LD+AL LGL++ R +TYWLP + F + F+ YE A L + P PDV RVFM F+
Sbjct: 74 PSRPMTIHVKTLTGKTITIVGGLETSTTIDSVKTMVQDREGIPPD------QQRLIFAGKQLEDGRSLSDYGIGNGATIDLVLRLRGDKPVIYLFAPVPLNATVRLSLVKAWSFSAIYPGVPI-KSSESGQ--SIEWNVNIHEDHTMTDIASGARVSYLFWEAETNPGLPLSPPSSPRLGPADSDIISPFDPSMPGLTDTNSVVLPASKTALY--------LDKALIALGLHIEARTSFITYWLPSILKHDFVALRFLPQASYEHAALLNVEPKPDVVTRVFMLFK 342
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: A0A0D7AXK4_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7AXK4_9AGAR) HSP 1 Score: 160 bits (404), Expect = 6.300e-43 Identity = 103/281 (36.65%), Postives = 142/281 (50.53%), Query Frame = 1
Query: 1 RSPKREMGIFVKTHTGKTIMIGAFPSETVLDIKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNIQSAATLQSFLPLRGGKPVILLYPPAPVDATVTLELKPLWSFSALYPKPPSNKLQQAGPHPKCKWHVHASPDGSLEDLSTGREYPYLFWEA--------DSSDGRVS------RSFGLDDTR--SFCVAGDAAGRYVPDWLCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAFR 795
R P + + I+V+T TG + + TV D+K ++ C +LL G L + ++LR Y I S +T+ LRGGKPVI L P +DATV + L WSFSALYP PS + W+V PDG L+++ +G E PYLFWEA + DG++S S G + R S A + D +LDRAL+ LGLN+ R +TYWLP ++ FV ++ YEK A L ++PAPDV RVFM F+
Sbjct: 92 RRPTKTLVIYVETLTGGRYTLNVASTSTVYDVKLAVESILDE------CTDDHKLLLDGSQLIESQSLRSYGIDSESTVLLVPTLRGGKPVIYLTSPIQIDATVRVSLTKDWSFSALYPVVPSVPSRSGE---SATWNVQVRPDGVLQEIDSGTEVPYLFWEALTNTASISTTEDGQMSPPPSPLMSNGFNPCRANSLFSAQTCVALTIKD-TPQYLDRALKDLGLNIEARASFITYWLPSFLKHENILLTFVSMDAYEKAAPLDVSPAPDVVTRVFMVFK 362
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: A0A5C2S7E1_9APHY (Ubiquitin-domain-containing protein n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2S7E1_9APHY) HSP 1 Score: 158 bits (400), Expect = 2.480e-42 Identity = 109/281 (38.79%), Postives = 139/281 (49.47%), Query Frame = 1
Query: 1 RSPKREMGIFVKTHTGKTIMIGAFPSETVLDIKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNI-QSAATLQSFLPLRGGKPVILLYPPAPV-DATVTLELKPLWSFSALYPKPPSNKLQQAGPHPKCKWHVHASPDGSLEDLSTGREYPYLFWEADSS-------------DGRVSRSFGLDDTRSFCVAGDAAGRYVP-DWLCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAFR 795
R R + I V T TGKTI+I P TV +K + + QRL++AG LED TL HY I S+ + L LRGGKPVI L+PP+PV ATV++ L P W+FS +YP P KL W V A+P+GSL D TG E YLFWEA S D S + D + G +P L +LD L+ L L+ R D +TYWLP L + + F+ YE+ A+L + PAPDV RVFM FR
Sbjct: 89 RQQYRNIDILVVTLTGKTIIIKINPRTTVRILKSYICDKEGIPED------QQRLIFAGRQLEDDHTLSHYGIVYSSVIVHLVLRLRGGKPVIYLFPPSPVAHATVSIRLVPQWTFSHIYP-PCDIKLLNDDLGQSITWSVFANPNGSLSDNRTGVELSYLFWEALSKSSIQTTPPLTPAVDASYSTTEHFDPSLPSLKPGHPTVVLLPFATLLPYLDTVLKSLTLHTSARNDFITYWLPALSRKPYVALRFLPQATYERAAQLEVTPAPDVVTRVFMLFR 362
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: A0A4Y7TAI2_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TAI2_9AGAR) HSP 1 Score: 157 bits (397), Expect = 5.140e-42 Identity = 97/280 (34.64%), Postives = 148/280 (52.86%), Query Frame = 1
Query: 13 REMGIFVKTHTGKTIMIGAFPSETVLDIKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNIQSAATLQSFLPLRGGKPVILLYPPA--PVDATVTLELKPLWSFSALYPKPPSNKLQQAGPHPKCKWHVHASPDGSLEDLSTGREYPYLFWEADSSDGRVSRSFGL--DDTRSFCVAGDAAGRYVPDW---------------LCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAFR 795
+E+ I+VK TG + I A+PS+T+ + K K++ ++ QRL++AG LEDGR L Y +++ L + LRGGKPVI ++PP+ V+A+V L L P W FS +YP ++ + G +W+V AS DG L + +TG E YLFWEA++ R+S T + ++P+ + +LD+AL+ LGL+ R +TYWLP L + + F+ YEK A L ++PAPDV R+FM F+
Sbjct: 76 KEITIWVKRDTGAIVDIKAYPSDTIDNFKAKIQDREGIPAD------QQRLIFAGKQLEDGRLLSDYGLRNEDVLYLVIRLRGGKPVIYVFPPSGSEVNASVKLSLVPEWEFSVIYPIVSASITKVGGQ--TLEWNVKASSDGVLLEKNTGLEVSYLFWEAEALK-RLSEPISPLPSPTSKYASLESVPETFIPNQPHINATNSIVLEVSKMTPYLDKALKELGLHTEARTSFITYWLPALLKHKYVALRFLPQTVYEKAAPLEVSPAPDVVARIFMLFK 346
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Match: A0A8H8J2X5_9AGAM (Ubiquitin family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8J2X5_9AGAM) HSP 1 Score: 155 bits (391), Expect = 1.210e-41 Identity = 100/273 (36.63%), Postives = 137/273 (50.18%), Query Frame = 1
Query: 19 MGIFVKTHTGKTIMIGAFPSETVLDIKEKLKXXXXXXSEGKGCLHHQRLLYAGMLLEDGRTLRHYNIQSAATLQSFLPLRGGKPVILLYPPAPVD-ATVTLELKPLWSFSALYPKPPSNKLQQAGPHPKCKWHVHASPDGSLEDLSTGREYPYLFWEADSSDG-----RVSRSFG--------LDDTRSFCVAGDAAGRYVP-DWLCVFLDRALERLGLNMRERCDMVTYWLPQLESSAFNIIYFVDVERYEKTARLTIAPAPDVTIRVFMAF 792
M +F+KT TGK + + S+T+ ++K K++ + QRL++AG LED TL YNI+ +TL LRGGKPVI L+PPA + V L L W FSALYP P G W V A PDG+L + TGRE YLFWEA ++ VSR D +R ++ +P + + ++D L LGL+ RC +TYWLP L+ + F+ YE A + + P+PDVT RVFM F
Sbjct: 34 MQLFIKTLTGKILTLEVESSDTIDNVKSKIQDKEGMPPD------EQRLIFAGTQLEDRCTLSDYNIKKESTLHLVKRLRGGKPVIYLFPPAAANNIRVDLALTQAWDFSALYPSAPICPTADGGQ--SVAWIVDAKPDGTLFEHGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQGVVATFDPSRPIITPSNST--LLPFEKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQQHKHIALRFLPQSEYEAAAPMHVTPSPDVTTRVFMLF 296 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11128.896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11128.896.1 >prot_E-fasciculatus_F_contig11128.896.1 ID=prot_E-fasciculatus_F_contig11128.896.1|Name=mRNA_E-fasciculatus_F_contig11128.896.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=259bp MGIFVKTHTGKTIMIGAFPSETVLDIKEKLKEKIKEKSEGKGCLHHQRLLback to top mRNA from alignment at E-fasciculatus_F_contig11128:3082..4396+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11128.896.1 ID=mRNA_E-fasciculatus_F_contig11128.896.1|Name=mRNA_E-fasciculatus_F_contig11128.896.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1315bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11128:3082..4396+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11128:3082..4396+ >mRNA_E-fasciculatus_F_contig11128.896.1 ID=mRNA_E-fasciculatus_F_contig11128.896.1|Name=mRNA_E-fasciculatus_F_contig11128.896.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1554bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11128:3082..4396+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |