mRNA_E-fasciculatus_F_contig11123.895.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: A0A6H5KMF7_9PHAE (Glyco_tran_28_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF7_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.240e-47 Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = 1
Query: 16 SGLGKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLIELDDSPSARRPYPPAKPEAFAAIVDEEMRAAQDGR 258
SGLGKALVVVVNRALMDNHQEELADALAQR+YLRATTPEGLA +L+ELDDSPSARRPYPPAKPEAFAAIVDEEMRAAQDGR
Sbjct: 5 SGLGKALVVVVNRALMDNHQEELADALAQRNYLRATTPEGLAGALVELDDSPSARRPYPPAKPEAFAAIVDEEMRAAQDGR 85
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: D7FSK5_ECTSI (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK5_ECTSI) HSP 1 Score: 153 bits (387), Expect = 7.360e-46 Identity = 76/80 (95.00%), Postives = 79/80 (98.75%), Query Frame = 1
Query: 19 GLGKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLIELDDSPSARRPYPPAKPEAFAAIVDEEMRAAQDGR 258
GLGKALVVVVNRALMDNHQEELADALAQR+YLRATTPEGLA +L+ELDDSPSARRPYPPAKPEAFAAIVDEEMRAAQDGR
Sbjct: 93 GLGKALVVVVNRALMDNHQEELADALAQRNYLRATTPEGLAGALVELDDSPSARRPYPPAKPEAFAAIVDEEMRAAQDGR 172
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: A0A7R9TAB8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TAB8_9VIRI) HSP 1 Score: 70.1 bits (170), Expect = 5.620e-13 Identity = 41/68 (60.29%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 22 LGKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLIELDDSPSARRPYPPAKPEAFAAIV 225
L K LVVVVN ALMDNHQ+ELA ALA R YL +TTP L S+L LD S A +PYP P A A V
Sbjct: 113 LKKPLVVVVNEALMDNHQQELAGALASRGYLVSTTPARLVSALETLDTS--ALKPYPGGDPAAVAQAV 178
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: A0A4S4M0F0_9AGAM (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4M0F0_9AGAM) HSP 1 Score: 69.7 bits (169), Expect = 5.940e-13 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 25 GKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLIELDDSPSARRPYPPAKPEAFAAIVDEEM 237
GK L++V N L+DNHQEELADAL+ +L+A+T L+ +L+E D PS P+PP F+ ++DEEM
Sbjct: 99 GKPLIIVPNPTLLDNHQEELADALSALGHLKASTVSNLSQTLLEFD--PSTLAPFPPFDGSRFSRLLDEEM 167
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: A0A167L3H1_CALVF (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167L3H1_CALVF) HSP 1 Score: 67.8 bits (164), Expect = 2.930e-12 Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 25 GKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLIELDDSPSARRPYPPAKPEAFAAIVDEEM 237
GK L+ V N +LMDNHQ ELADALA++ Y+ TPE L +L+ PS P+PP F +I+D+EM
Sbjct: 93 GKPLIAVPNTSLMDNHQAELADALAKQGYIGVATPETLPEALVAF--KPSQLTPFPPFDGSKFLSILDDEM 161
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: A0A8H4QQX0_9AGAR (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4QQX0_9AGAR) HSP 1 Score: 66.6 bits (161), Expect = 9.550e-12 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 22 LGKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLIELDDSPSARRPYPPAKPEAFAAIVDE 231
+GK ++VV N L+DNHQ ELA AL + YL+ATT +GLA ++ + D S +P+PP FA IVDE
Sbjct: 100 MGKPMIVVPNPTLLDNHQAELASALEEMGYLKATTVDGLAQTIKDFDASKI--KPFPPFNGSRFAKIVDE 167
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: A0A0L0DB70_THETB (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DB70_THETB) HSP 1 Score: 66.2 bits (160), Expect = 1.580e-11 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 22 LGKALVVVVNRALMDNHQEELADALAQRDYLRATTPE--GLASSLIELDDSPSARRPYPPAKPEAFAAIVDEEM 237
+GK +V V N +LM+NHQEELA A+A Y+ PE LA++L L D + +P+PP EAF A++D EM
Sbjct: 104 MGKPMVAVANGSLMNNHQEELAAAMAGAGYVIRAEPEPQSLAAALAALSDGSAELQPFPPPASEAFVAVLDAEM 177
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: A0A2H3DN98_ARMGA (UDP-N-acetylglucosamine transferase subunit ALG13 n=3 Tax=Armillaria TaxID=47424 RepID=A0A2H3DN98_ARMGA) HSP 1 Score: 65.1 bits (157), Expect = 3.680e-11 Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 22 LGKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLIELDDSPSARRPYPPAKPEAFAAIVDEEM 237
LGK L+VV N L+DNHQEELA+AL + +LR++T LA ++ D S + +PP P F +VDEEM
Sbjct: 100 LGKPLIVVPNPTLLDNHQEELAEALEELGHLRSSTVSDLAHTIETFDRSAIVK--FPPQDPSRFRRLVDEEM 169
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: A0A2H3J8S5_WOLCO (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J8S5_WOLCO) HSP 1 Score: 65.5 bits (158), Expect = 4.200e-11 Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 22 LGKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLIELDDSPSARRPYPPAKPEAFAAIVDEEM 237
LGK L+VV N +L+DNHQEELA ALA +L+A T GL +++ L D+ P+PP F ++DEEM
Sbjct: 121 LGKPLIVVPNPSLLDNHQEELATALASLGHLKAATIAGLPEAIVSLADAKLV--PFPPFNGSRFRELLDEEM 190
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Match: V9EYS7_PHYPR (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=11 Tax=Phytophthora TaxID=4783 RepID=V9EYS7_PHYPR) HSP 1 Score: 64.7 bits (156), Expect = 4.900e-11 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 22 LGKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLIELDDSPSARRPYPPAKPEAFAAIVDEEMRAAQ 249
L K LVVVVN ALMDNHQ ELA+A+ + + ATT +GL S++E D S + PYPP +AF +VD M A+
Sbjct: 90 LKKMLVVVVNTALMDNHQAELAEAMVDQKFCLATTVQGL-HSVLETGDWNSLQ-PYPPLDEQAFPDLVDAVMGVAE 163 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11123.895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11123.895.1 >prot_E-fasciculatus_F_contig11123.895.1 ID=prot_E-fasciculatus_F_contig11123.895.1|Name=mRNA_E-fasciculatus_F_contig11123.895.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=87bp TCRRYSGLGKALVVVVNRALMDNHQEELADALAQRDYLRATTPEGLASSLback to top mRNA from alignment at E-fasciculatus_F_contig11123:30..290+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11123.895.1 ID=mRNA_E-fasciculatus_F_contig11123.895.1|Name=mRNA_E-fasciculatus_F_contig11123.895.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=261bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11123:30..290+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11123:30..290+ >mRNA_E-fasciculatus_F_contig11123.895.1 ID=mRNA_E-fasciculatus_F_contig11123.895.1|Name=mRNA_E-fasciculatus_F_contig11123.895.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=522bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11123:30..290+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |