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Homology
BLAST of mRNA_E-fasciculatus_F_contig11084.866.1 vs. uniprot
Match: A0A6H5KTR9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTR9_9PHAE) HSP 1 Score: 243 bits (621), Expect = 1.550e-72 Identity = 244/339 (71.98%), Postives = 248/339 (73.16%), Query Frame = 3
Query: 63 MSSRQKKPDARALFKQAKSRKGENNGKNVVSAGGSXXXXXXXXXXXXXXXXXXXXXKSKEELLALYRAKKAIAAASKANASAQQIKKQPPQRPSAKSSGSPATERKPTEKVPVMTAASGAGRPSVQPAPRGQVQAEGGGLTGLLGIGAGDSXXXXXXXXXXXXXXXXXXXXXXSDRHPGKNVAPAVSTPAAAAR---EGLPAGFFDEDLAADSSKTDDGTXXXXXXXXXXXXXXXXPPAGRFGAERAAELXXXXXXXXXXXXLREAEKLAAMRAAGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPNGSALPEGFFDDPEMDAKSRGVDLKAEKK 1070
MS+ QKKPDARALFKQAKSRKGEN+GKNVVSAGGS XXXXXXXXXXX SKEELLALYRAKK QRPS KSSGSPAT RKPT KVPVMTAASGAGRPSVQPAPRGQVQAEG GLTGLLGIGAGDS XXXXXXXXXXXXXXXXXX RHPG + AP EGLPAGFFDEDLA XXXXXXXXXXXX PP GRFGAERAAEL XXXXXXXXXLREAEKLAAMRAAG+ XXXXXXXXXXXXXXXA PNGSALPEGFFDDPEMDAKSRGVDLKAEKK
Sbjct: 1 MSNHQKKPDARALFKQAKSRKGENSGKNVVSAGGSAVSGRSGAXXXXXXXXXXX---SKEELLALYRAKKXXXXXXXXXXXXXXXXXXXTQRPSDKSSGSPATGRKPTVKVPVMTAASGAGRPSVQPAPRGQVQAEGVGLTGLLGIGAGDSSXXXXXXXXXXXXXXXXXX-----RHPGTDAAPVSXXXXXXXXXXPEGLPAGFFDEDLAXXXXXXXXXXXXXXXXXXXXXXRPQAPPVGRFGAERAAELAAEXXXXXXXXXLREAEKLAAMRAAGLLVVAADGATGGAAADXXXXXXXXXXXXXXXA-PNGSALPEGFFDDPEMDAKSRGVDLKAEKK 330
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 224.2 |
| Seed ortholog evalue | 9.4e-56 |
| Seed eggNOG ortholog | 2880.D7FPG5 |
| KEGG ko | ko:K13104 |
| EggNOG OGs | 2D068@1,2SCZH@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03041 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-14_004850.1 |
| Exons | 4 |
| Model size | 1085 |
| Cds size | 1023 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11084.866.1 >prot_E-fasciculatus_F_contig11084.866.1 ID=prot_E-fasciculatus_F_contig11084.866.1|Name=mRNA_E-fasciculatus_F_contig11084.866.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=341bp
MSSRQKKPDARALFKQAKSRKGENNGKNVVSAGGSAAGVSGGRSGAATSA
GGKYGGKSKEELLALYRAKKAIAAASKANASAQQIKKQPPQRPSAKSSGS
PATERKPTEKVPVMTAASGAGRPSVQPAPRGQVQAEGGGLTGLLGIGAGD
SSSSDEEEDDDDDDNSNNKAGGGSDRHPGKNVAPAVSTPAAAAREGLPAG
FFDEDLAADSSKTDDGTEEAAGGPAPAPPPPQAPPAGRFGAERAAELAAE
AAAVAEAAALREAEKLAAMRAAGVTVVAAAGAPGGAAAGGGEKAADGGAE
AAAAAAPNGSALPEGFFDDPEMDAKSRGVDLKAEKKEEEQ* back to topmRNA from alignment at E-fasciculatus_F_contig11084:243..4493+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig11084.866.1 ID=mRNA_E-fasciculatus_F_contig11084.866.1|Name=mRNA_E-fasciculatus_F_contig11084.866.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4251bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11084:243..4493+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACTACTAGCACCAGTTCTCACTACTGACAGCAGCTGCGGGTAGGGCACCC
CACATCCCTGACATGTCAAGCCGTCAGAAGAAGCCTGACGCTCGCGCCCT
TTTCAAGCAAGCCAAGAGCAGGAAAGGGGAGAATAATGGAAAAAATGTAG
TGTCGGCGGGGGGATCAGCAGCAGGAGTATCCGGCGGTCGATCAGGGGCA
GCAACATCAGCGGGAGGGAAATATGGAGGGAAAAGCAAGGAAGAGGTGAG
GGGGAGTAGAGATACCGTCGAGGTTTGTGACCAGAGAACATGGTGTGCCA
ACCTAAATGGCGAATTCTGCGCCTTTTGTCCAAATTTTGCAAGTGTATCC
AGGGAGAAATTCAACGGACCATTTTGCGCATCGTTACATGGAGAGAATGC
CCGCTCGAGATCATTAGTTGTAGCCGATTGAAGCGAGGTTTGAGGGATCA
CCTGCTGGACAGCAGTAGTGGACTTAATCAAGCCTGGTTTAAGTCCTTAA
ACAGGGAAAGCAGTAGTGCCCGCGGAACATGCTTTGCCTTGACACTCATG
TGCTGTAGGTGAGACAGCAGTCTCAGAAGGTGACGCATCGAGCAGGTGCC
ACTATGAACTGTAATGCTTGGAAAGCCTGCTGTAAATGCTCTTCGTCCTG
TATTGAGGGCGTCACCCCCCAACAAACAGCCTTGGCAGACTATATTCAAT
AGCTACGCCGTAACAACACACCCGTGGAGATTTACAGCAGTAGTATAGAC
TGCCGTCGTCTCTTTTTTTCCATGCTGCAGGCGCAAATCAAAGGAACACG
CAGATCACCACCACCCTCTCTCCACCGCCGCCGGCAGCAAACCATCAACA
TCGACGACAACAAGCCAGTTTCCTACCGTATTTCTCGGAGACTTATCATG
GTCGTGCTTACGGCTACAGCAGTATTATAGGTGCATTGGCTCAACAAGGG
GTGTTGTCGGTGATCGCACAAGGTTAAGGTTGTGGTGCAAGAGGTCCAGC
CAGTACAGTACCGAAGAAGAAGACAAAGCTCCGGAGCTTGTCTGCCATGA
ACGAGGCTGACGCACCGCAACCTGGTTGGCCTCTCCGTTGCCGAAGATAA
TGGCACGTTTTTTTGCCACTGCCGTGTTCGGGGGCAAATTACCTGAAGTA
GGTATCTGCTCTGCTGCCGTGCACCTTATGTATACGCACGCCACCTTGTT
CTCCTCATAGGTCTTTTTTTCATTGGAGCGGTTTAACTCTCAACACGTTG
TGCTGATGCCCGCCGTTAACGTCTTGCTCGTGCCCTCCTCCCTGCCTCCC
CCCAGCTGTTGGCTTTGTATAGGGCGAAGAAAGCCATCGCCGCTGCCAGC
AAGGCTAATGCGAGCGCACAGCAAATCAAGAAGCAGCCGCCCCAGCGCCC
GAGTGCCAAGAGCTCGGGGTCGCCAGCTACGGAACGGAAGCCGACCGAAA
AGGTAGGGAGGGGGGCACACGCACATCCCACACCACATATCTCGCGTTGT
GTACAATAGAACAGCGCCTATTTCAGCTGCTGCGCGTGGCGACGGCAGCC
TCGTTTTTGCATGTTGTCTGTGTGTCCGTCCCATCTGGTGGAAGGGAAAT
GTGACATAGCTCCATCGAGCGAGAGACAGACAGACAGACAGACAGACCGA
CCGACGCACACAGAGAGGTACAGACAGAGAGAGGACATGCGCCGTTGTGT
GTAGCAAAACTGTCACATCCTAACCGCACACCTAACCGCACAGCCCGTGC
GTGGACTGGACTTACGACTTACAAATCACCCGTGTCCTCTTGATGTGCCG
CTGTGTAGATAGTTTGTCGCCTCTCTTCGTACATGTTAACACCACACGAA
CGACATTCCCGTATATATATATTGGCGTATCTTCTCCTTCTAAGAGGCAT
GGCCGTGTCGCAGAGAGACAGATAGCCGTGGCGAAAGCGGCTATGCAGTT
ATCTGTAAAAATCCATCATACACCTCTCTCTCTCTCTCTCTTTTCCGCGT
ATCCCCCCACCGGTACAATATCACTCGCTTTTTGGTGCGATTGTGCGTTC
ACCGTCGAAATCGCTCCTCCCTGTTTTGCACCTCCATCTCCGTCTCGCTT
GCCACGCGTCAACGTGGCATGTGCCACGGGGCTATTCATCAACTAACTAC
TCATCGACAGGTGCCGGTGATGACCGCAGCGTCTGGAGCCGGGCGCCCCA
GCGTCCAGCCAGCGCCGCGAGGACAGGTCCAAGCGGAGGGCGGTGGATTG
ACAGGTGAATTTCACCGCCCATTCGGCAGAAGTACATGCATGTCGAAGCA
ACAAGACCACTTGCAATACGAAGGTGCGCGCACTTTTTTGCTGCTCGGCG
CGACCTTTTTCGTCGATAAAGAGGAATTTGGCTGCTCATTCCGCAGTCAG
AGTCATGGCCAGAAGCAACAGTTGAAGTTTGAGCGATGTTTTCTCCATGC
AAACGCACACACCCTCTACGTGGCAACGAATAACTACATTTGGTGCGGGT
CAAGCGTGCGAACAGTATTAGGTAGTTTTGCTTGAAGCGTCATAATGTCT
CAAAATCCGGGGGATAGAGACATGATGATGCTACAGTGCAACTACCTGAT
ACTGTTCGCACGCTTGAACCAAACAAATGTAGTTGTTCGTTGCCGTTTAG
AGTGTGTGTGCGTTTGCTTGGAGAAAACACCGCTCTACACCGCTCTATTT
TCATGCGTTTCTTCTGGCCATGATTCTGATTGCGGAAATACTGTAAGCAG
CCAAATTCCTACAGAAGGATCTTTCTCAACGAAAAAGGCCGCGCCGAGCA
GCAAAGAGGGGCGCGAACCTTTTTTTATTGGAAGTATATTCTATCGACAA
AAACTGCTGTGGCGCTCGCTCTTTGCAGCTATGATGAGAGTTCTGGCCGC
GTTGTTCCTGTCGCGATTCACTGAGGTGTTAATCCATTCGCTGCAGACGA
GGTTGGTGTGCCGTACTTCGTCGACACTCTCTTGGTTGATGAATTATGTG
TCTATTGATGGACGCCATAGTTGTGTCTTGGTAACGCATCCCACCGCCGT
GGATATATTGTGTGGAGAATCAACGGCAAACATTCTTACCCCACGGGTTC
GTTTGATAGAGTGAGGAATTCTTGTGTCGTGGTGGCAAGCTATCTAGCCG
TTACATGGAATGAAGAAGCTCGAACGCGACTTTAAGGTTGCACAGAGTTG
GACGTTGGCCACAACCATGTACCCGCCTCCTACCGTACCGTACGGAACAC
CGCCCCACGGTATGGTTTGTTTGTGACGTACGTACACTGACATTGGCAAG
GGGCAAGAGCGTCCATGCCAAACGACGCTCGTCGAAGAGGCCGCAGAGAA
CTTGCCCATAACGCGATGATGTAATGAGCATCTCCACCTTACACGTTGTG
GATAAAACAGGGCTACGGGTGGCGTCCCACGGCGCCAAGCCGGGGGTTTA
ACCTTTTTGACACGTTCCCTGCATCGCTGGGCGACACAGCACGCACGCAC
GCCCTTTTTCTCCGAGAAACCCTCCCGTTGCTGGCCAAGGACAAGAAGCA
CCAGCCCCCACGGCGAGTAGAGCGCATCCTTGGCCTTGGTGTCACTGGTT
CTGACCTCGCCAACGCGTGTTGGGACTCTTGACTATTGTTGTATCGCCCC
AGGCCTTTTAGGCATCGGAGCAGGGGACAGCAGCAGCAGCGACGAAGAAG
AAGACGACGACGACGACGACAACAGCAATAACAAGGCAGGCGGTGGTAGT
GACAGGCATCCGGGAAAGAATGTCGCCCCTGCCGTCTCAACCCCCGCCGC
CGCCGCACGCGAGGGCTTGCCAGCGGGCTTCTTCGACGAAGACTTGGCGG
CCGATTCCTCCAAGACTGACGACGGCACCGAGGAGGCCGCCGGGGGGCCG
GCACCGGCTCCGCCGCCGCCCCAGGCGCCGCCGGCGGGGCGGTTTGGGGC
GGAACGGGCGGCCGAGCTTGCCGCCGAAGCCGCTGCCGTTGCCGAGGCTG
CTGCTCTCCGGGAGGCGGAGAAGCTGGCGGCGATGCGCGCGGCGGGTGTA
ACGGTAGTAGCGGCGGCTGGGGCACCAGGCGGGGCAGCGGCAGGCGGGGG
CGAGAAGGCCGCGGACGGCGGGGCTGAGGCGGCGGCGGCGGCGGCACCCA
ACGGATCTGCTCTGCCGGAAGGGTTCTTCGACGATCCCGAGATGGACGCG
AAATCCCGAGGCGTTGACCTCAAGGCCGAGAAGAAAGAGGAGGAGCAGTG
A back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig11084:243..4493+ >mRNA_E-fasciculatus_F_contig11084.866.1 ID=mRNA_E-fasciculatus_F_contig11084.866.1|Name=mRNA_E-fasciculatus_F_contig11084.866.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2046bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11084:243..4493+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCAAGCCGTCAGAAGAAGCCTGACGCTCGCGCCCTTTTCAAGCAAGC
CAAGAGCAGGAAAGGGGAGAATAATGGAAAAAATGTAGTGTCGGCGGGGG
GATCAGCAGCAGGAGTATCCGGCGGTCGATCAGGGGCAGCAACATCAGCG
GGAGGGAAATATGGAGGGAAAAGCAAGGAAGAGATGTCAAGCCGTCAGAA
GAAGCCTGACGCTCGCGCCCTTTTCAAGCAAGCCAAGAGCAGGAAAGGGG
AGAATAATGGAAAAAATGTAGTGTCGGCGGGGGGATCAGCAGCAGGAGTA
TCCGGCGGTCGATCAGGGGCAGCAACATCAGCGGGAGGGAAATATGGAGG
GAAAAGCAAGGAAGAGCTGTTGGCTTTGTATAGGGCGAAGAAAGCCATCG
CCGCTGCCAGCAAGGCTAATGCGAGCGCACAGCAAATCAAGAAGCAGCCG
CCCCAGCGCCCGAGTGCCAAGAGCTCGGGGTCGCCAGCTACGGAACGGAA
GCCGACCGAAAAGCTGTTGGCTTTGTATAGGGCGAAGAAAGCCATCGCCG
CTGCCAGCAAGGCTAATGCGAGCGCACAGCAAATCAAGAAGCAGCCGCCC
CAGCGCCCGAGTGCCAAGAGCTCGGGGTCGCCAGCTACGGAACGGAAGCC
GACCGAAAAGGTGCCGGTGATGACCGCAGCGTCTGGAGCCGGGCGCCCCA
GCGTCCAGCCAGCGCCGCGAGGACAGGTCCAAGCGGAGGGCGGTGGATTG
ACAGGTGCCGGTGATGACCGCAGCGTCTGGAGCCGGGCGCCCCAGCGTCC
AGCCAGCGCCGCGAGGACAGGTCCAAGCGGAGGGCGGTGGATTGACAGGC
CTTTTAGGCATCGGAGCAGGGGACAGCAGCAGCAGCGACGAAGAAGAAGA
CGACGACGACGACGACAACAGCAATAACAAGGCAGGCGGTGGTAGTGACA
GGCATCCGGGAAAGAATGTCGCCCCTGCCGTCTCAACCCCCGCCGCCGCC
GCACGCGAGGGCTTGCCAGCGGGCTTCTTCGACGAAGACTTGGCGGCCGA
TTCCTCCAAGACTGACGACGGCACCGAGGAGGCCGCCGGGGGGCCGGCAC
CGGCTCCGCCGCCGCCCCAGGCGCCGCCGGCGGGGCGGTTTGGGGCGGAA
CGGGCGGCCGAGCTTGCCGCCGAAGCCGCTGCCGTTGCCGAGGCTGCTGC
TCTCCGGGAGGCGGAGAAGCTGGCGGCGATGCGCGCGGCGGGTGTAACGG
TAGTAGCGGCGGCTGGGGCACCAGGCGGGGCAGCGGCAGGCGGGGGCGAG
AAGGCCGCGGACGGCGGGGCTGAGGCGGCGGCGGCGGCGGCACCCAACGG
ATCTGCTCTGCCGGAAGGGTTCTTCGACGATCCCGAGATGGACGCGAAAT
CCCGAGGCGTTGACCTCAAGGCCGAGAAGAAAGAGGAGGAGCAGTGAGCC
TTTTAGGCATCGGAGCAGGGGACAGCAGCAGCAGCGACGAAGAAGAAGAC
GACGACGACGACGACAACAGCAATAACAAGGCAGGCGGTGGTAGTGACAG
GCATCCGGGAAAGAATGTCGCCCCTGCCGTCTCAACCCCCGCCGCCGCCG
CACGCGAGGGCTTGCCAGCGGGCTTCTTCGACGAAGACTTGGCGGCCGAT
TCCTCCAAGACTGACGACGGCACCGAGGAGGCCGCCGGGGGGCCGGCACC
GGCTCCGCCGCCGCCCCAGGCGCCGCCGGCGGGGCGGTTTGGGGCGGAAC
GGGCGGCCGAGCTTGCCGCCGAAGCCGCTGCCGTTGCCGAGGCTGCTGCT
CTCCGGGAGGCGGAGAAGCTGGCGGCGATGCGCGCGGCGGGTGTAACGGT
AGTAGCGGCGGCTGGGGCACCAGGCGGGGCAGCGGCAGGCGGGGGCGAGA
AGGCCGCGGACGGCGGGGCTGAGGCGGCGGCGGCGGCGGCACCCAACGGA
TCTGCTCTGCCGGAAGGGTTCTTCGACGATCCCGAGATGGACGCGAAATC
CCGAGGCGTTGACCTCAAGGCCGAGAAGAAAGAGGAGGAGCAGTGA back to top
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