mRNA_E-fasciculatus_F_contig11080.864.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: D8LPN0_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN0_ECTSI) HSP 1 Score: 184 bits (468), Expect = 1.040e-55 Identity = 99/119 (83.19%), Postives = 102/119 (85.71%), Query Frame = 1
Query: 7 VVSRLSRVFPSGLSNFYSGLVASSIDRTAMLDELDFRKEAKNIEDFTGFLDRAGIRDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
+ SRL + L +AS I RTAMLDELDFRKEAKNIEDFTGFLDRAGI DAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA
Sbjct: 20 IASRLLEILQPELGRTSFAAIASDI-RTAMLDELDFRKEAKNIEDFTGFLDRAGILDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 137
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: A0A6H5KTF5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF5_9PHAE) HSP 1 Score: 181 bits (458), Expect = 2.150e-51 Identity = 97/119 (81.51%), Postives = 101/119 (84.87%), Query Frame = 1
Query: 7 VVSRLSRVFPSGLSNFYSGLVASSIDRTAMLDELDFRKEAKNIEDFTGFLDRAGIRDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
+ SRL + L +AS I RTAMLDELDFRKEAKNIEDFTGFL RAGI DAVAPKVYEDLSSKRLLVMERLKGVALTDL+GIKDYSSNPEATLITALNTWSMSVMMAESFHA
Sbjct: 321 IASRLLEILQPELGRTSFAAIASDI-RTAMLDELDFRKEAKNIEDFTGFLGRAGILDAVAPKVYEDLSSKRLLVMERLKGVALTDLDGIKDYSSNPEATLITALNTWSMSVMMAESFHA 438
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: A0A835YPW4_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW4_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.240e-31 Identity = 62/93 (66.67%), Postives = 74/93 (79.57%), Query Frame = 1
Query: 85 RTAMLDELDFRKEAKNIEDFTGFLDRAGIRDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
R +MLDELDF KEA NI++F FL A + A AP+VY LS++R+L MERLKGV LTD+EGI+ YS+NPEATLI ALNTWS+SVMM SFHA
Sbjct: 262 RASMLDELDFGKEADNIDEFLQFLSDADVTQATAPRVYRSLSTRRVLTMERLKGVPLTDIEGIRRYSANPEATLINALNTWSLSVMMCNSFHA 354
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: A0A4D9CYJ6_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYJ6_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.170e-28 Identity = 59/121 (48.76%), Postives = 86/121 (71.07%), Query Frame = 1
Query: 1 VCVVSRLSRVFPSGLSNFYSGLVASSIDRTAMLDELDFRKEAKNIEDFTGFLDRAGIRDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
+ + SRL L+ G + + I R+++L+E+DF KE N+E+F FLD+AG+ A PKVY +LS++++L MERL+GV+L DLEGI+ Y+ +PE LITALNTWS+SV++ SFHA
Sbjct: 216 IYLASRLIETLAPDLARTSLGDIVADI-RSSILEEVDFSKEQANLEEFRMFLDQAGVTAATCPKVYPELSTRKVLTMERLRGVSLIDLEGIRAYTDDPEGALITALNTWSLSVVLCPSFHA 335
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: A0A7S0XPK8_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XPK8_HEMAN) HSP 1 Score: 112 bits (280), Expect = 2.340e-26 Identity = 61/101 (60.40%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 61 GLVASSIDRTAMLDELDFRKEAKNIEDFTGFLDRAGIRDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
G +A I RT MLDELDFRKEA NI+DF FL + I + V P VY SSKRLL M+RL G LTDLE I YS+NPE TL+ ALNTW SV+ +SFHA
Sbjct: 296 GNIAEDI-RTTMLDELDFRKEADNIQDFQAFLTASDIDNVVCPFVYRGESSKRLLTMQRLYGRPLTDLEAIASYSANPEETLLNALNTWMASVVACKSFHA 395
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: A0A6T5M278_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5M278_HETAK) HSP 1 Score: 111 bits (277), Expect = 3.670e-26 Identity = 62/120 (51.67%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 7 VVSRLSRVFPSGLSNFYSGLVASSIDRTAMLDELDFRKEAKNIEDFTGFLDRAGIRD-AVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
V SR+ + L +A I RT+MLDELDF KEA NI +F FL R G+ A AP+VY +LS +R+L MER GV LTDL+ I+ YSS PE TLI ALNTW+ SV++ ++FHA
Sbjct: 198 VTSRVLELLSPELGRVALADIAGDI-RTSMLDELDFTKEAANIAEFRDFLVREGLTGVAAAPRVYPELSGRRVLCMERFDGVPLTDLDNIRRYSSQPEKTLIDALNTWTASVLLCDTFHA 316
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: A0A6C1NIZ5_9GAMM (AarF/ABC1/UbiB kinase family protein n=1 Tax=Halomonadaceae bacterium TaxID=2026746 RepID=A0A6C1NIZ5_9GAMM) HSP 1 Score: 110 bits (274), Expect = 5.990e-26 Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 67 VASSIDRTAMLDELDFRKEAKNIEDFTGFLDRAGIRDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
V I RT M++E DF KEA N+E F FL+ G RDA PKVY DLSS+R+L MER GV LTDLE I+ +S +PE TLITA+NTW S+ E FHA
Sbjct: 173 VVQEIQRT-MMEECDFVKEANNLETFARFLEDTGNRDATVPKVYRDLSSRRVLTMERFHGVPLTDLESIRRFSKDPERTLITAMNTWFASLTQCEFFHA 270
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: D8LFG3_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG3_ECTSI) HSP 1 Score: 109 bits (273), Expect = 9.470e-26 Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 85 RTAMLDELDFRKEAKNIEDFTGFLDRAGI-RDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
R++MLDELDF+KEA N E F FL +GI + APKV+ + S++R+L MERL GV LTDLEGI+ S NPEATLI+ALNTW++SVM + FHA
Sbjct: 273 RSSMLDELDFKKEAANQEVFRTFLKESGIDHEVTAPKVFPEASTERVLTMERLYGVPLTDLEGIQKVSKNPEATLISALNTWTLSVMNCDFFHA 366
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: A0A6H5KMH0_9PHAE (ABC1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH0_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.270e-25 Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 85 RTAMLDELDFRKEAKNIEDFTGFLDRAGI-RDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
R++MLDELDF+KEA N E F FL +GI + APKV+ + S++R+L MERL GV LTDLEGI+ S NPEATLI+ALNTW++SVM + FHA
Sbjct: 292 RSSMLDELDFKKEAANQEIFRAFLKESGIDHEVTAPKVFPEASTERVLTMERLYGVPLTDLEGIQKVSQNPEATLISALNTWTLSVMNCDFFHA 385
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Match: A0A1D1ZEB0_9ARAE (Putative aarF domain-containing protein kinase At5g05200, chloroplastic (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZEB0_9ARAE) HSP 1 Score: 110 bits (274), Expect = 1.530e-25 Identity = 54/94 (57.45%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 85 RTAMLDELDFRKEAKNIEDFTGFLDRAGI-RDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHA 363
+ +ML+E+DFRKEA NIE F G+L+ G+ R A+APKVY+ S++R+L MERL GV LTDL+ IK SS+PE TL+TALN W S++ E+FHA
Sbjct: 298 KESMLEEVDFRKEAANIESFRGYLENMGLTRQAIAPKVYQHCSTRRILTMERLYGVPLTDLDSIKSLSSDPEMTLVTALNVWFGSLLARETFHA 391 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11080.864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11080.864.1 >prot_E-fasciculatus_F_contig11080.864.1 ID=prot_E-fasciculatus_F_contig11080.864.1|Name=mRNA_E-fasciculatus_F_contig11080.864.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=130bp VCVVSRLSRVFPSGLSNFYSGLVASSIDRTAMLDELDFRKEAKNIEDFTGback to top mRNA from alignment at E-fasciculatus_F_contig11080:466..1348- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11080.864.1 ID=mRNA_E-fasciculatus_F_contig11080.864.1|Name=mRNA_E-fasciculatus_F_contig11080.864.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=883bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11080:466..1348- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11080:466..1348- >mRNA_E-fasciculatus_F_contig11080.864.1 ID=mRNA_E-fasciculatus_F_contig11080.864.1|Name=mRNA_E-fasciculatus_F_contig11080.864.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=780bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11080:466..1348- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |