mRNA_E-fasciculatus_F_contig11074.856.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11074.856.1 vs. uniprot
Match: D7FIE2_ECTSI (Abhydrolase domain-containing protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIE2_ECTSI) HSP 1 Score: 655 bits (1691), Expect = 9.900e-230 Identity = 372/503 (73.96%), Postives = 384/503 (76.34%), Query Frame = 1
Query: 1 QLGGYMQSFMFATWCPPCDRAMVSRLVSRKTGRIRVETP----CFPSSWSCVAARLAAAVSFDLLGTPLPADAPVVFVLFGVVGGVDVFYIRYLATHLSTKYGYRVVTKNWRGIGLGVSTRRPETWDHAALSDRRGAIKHLRRTVEGHVPVLGVGFSFGGCVLTAIAGMAPQEANGLCGLVSIFGLFDMPAMMKHIAEQYAYPYGFANTKVTVKNYRKFKVLETLTAEADASVTGGRSSGPIRNSSSCFSDDEGMGLGPSSSS-TAEEPLRPSTGPMRTTKMLHPASAEVGGAAAPVAVGCSAASQAPSSASTIASLATRFSLSAGSGASGR-----LVDGETTPSTATEEAVAWRRGDEMFHTASLLDSGGGKEGEVARPAGPA-GAGATAGLVTAKEMAAMKDPSAFHEALTLPFTGDSSVDTYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGNVVCVAITEHGDHCGWFDGLGAGSWLDRVS 1476
+LGG+MQSFMFATWCPP DRAMVSRLVSR+ RVE+ F W FDL TPLPADAPVVFVL GVVG YIR+LA HLSTKYGYRVVTKNWRGIGL +STRRPETWDHAALSD R AIKHLRRTV HVPVLGVGFSFGGCVLTAIAG APQE +GLCGLVSI GLFDMPAMMKHIAEQYAYPYGFANTKVTVKNYRKFKVLETLTAEAD SV GGRSSGPIRNSS C SDDEGMG+GPSSSS TAEEPLRPSTGPMRT K L PASA LVDGETT TAT EAVA RRGDE+FHTASLLDSG GK EV PAG GAGAT+GLVTAKEMAAMKDPSAFHEALTLPFTGDSSVD YFQRIGRVMGQ VSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDG + VAITEHG HCGWFDGLGAGSWLDR +
Sbjct: 129 RLGGHMQSFMFATWCPPGDRAMVSRLVSRQD---RVESSFDGGVFRMDW------------FDLRETPLPADAPVVFVLPGVVGQGTNVYIRHLAAHLSTKYGYRVVTKNWRGIGLELSTRRPETWDHAALSDCRDAIKHLRRTVGEHVPVLGVGFSFGGCVLTAIAGTAPQEEHGLCGLVSISGLFDMPAMMKHIAEQYAYPYGFANTKVTVKNYRKFKVLETLTAEADVSVPGGRSSGPIRNSSFCSSDDEGMGVGPSSSSATAEEPLRPSTGPMRTRKKLRPASAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVDGETTQGTATAEAVASRRGDEVFHTASLLDSGHGKGREVGMPAGAGPGAGATSGLVTAKEMAAMKDPSAFHEALTLPFTGDSSVDAYFQRIGRVMGQGVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDG--IVVAITEHGGHCGWFDGLGAGSWLDRAT 614
BLAST of mRNA_E-fasciculatus_F_contig11074.856.1 vs. uniprot
Match: A0A835YXD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD5_9STRA) HSP 1 Score: 175 bits (443), Expect = 5.910e-44 Identity = 96/246 (39.02%), Postives = 142/246 (57.72%), Query Frame = 1
Query: 4 LGGYMQSFMFATWCPPCDRAMVSRLVSRKT-GRIRV-----ETPCFPSSWSCVAARLAAAVSFDLL-------GTPLPADAPVVFVLFGVVGGVDVFYIRYLATHLSTKYGYRVVTKNWRGIGLGVSTRRPETWDHAALSDRRGAIKHLRRTVEGHVPVLGVGFSFGGCVLTAIAGMAPQEANGLCGLVSIFGLFDMPAMMKHIAEQYAYPYGFANTKVTVKNYRKFKVLETLTAEADASVTGGRS 702
+GG++QS MFA WCPP ++ +K ++R+ E C + + + +F ++ G PLP+ APVV +L GVVG D Y++ +A HL+ +YG+R V K WRG+G ++T RPETWD AL D I ++R T+ VP+ GVGFSFGG +LT G P+ + L +VS+ GLFD +M+KH+ Q+ + Y N KVTV NY++FKVL+ + A ++ T S
Sbjct: 139 IGGHIQSAMFAMWCPPKVWRQTGKMTCKKDLVKVRMHVCLQEGVCMYACKTDLVESSRDGGAFGVVWWDASAAGAPLPSTAPVVIMLPGVVGKPDNIYLKRMALHLAHRYGWRTVVKGWRGLGTELTTPRPETWDDTALQDLLDVIAYVRGTIGPGVPMFGVGFSFGGALLTTAVGTVPRAVHTLSAVVSVSGLFDFGSMLKHVETQWGWLYDAMNAKVTVANYKRFKVLDVVCTPARSADTAATS 384
BLAST of mRNA_E-fasciculatus_F_contig11074.856.1 vs. uniprot
Match: A0A6H5JJN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN0_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 4.100e-13 Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 1330 LCPPHAWVGALEAAAKSDGNVVCVAITEHGDHCGWF---DGLGAGSWLDRVSR 1479
L P WVGALEAAAKSDG + VAIT+HG HCGWF DGLGAGSWLDR ++
Sbjct: 20 LAPACLWVGALEAAAKSDG--IVVAITKHGGHCGWFGWFDGLGAGSWLDRATK 70
BLAST of mRNA_E-fasciculatus_F_contig11074.856.1 vs. uniprot
Match: A0A150GN41_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GN41_GONPE) HSP 1 Score: 61.2 bits (147), Expect = 3.100e-6 Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 1147 LVTAKEMAAMKDPSAFHEALTLPFTGDSSVDTYFQRIGRVMGQDVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGNVVCVAITEHGDHCGWFDGLGAGSWLDRV 1473
LV E+ A F AL LP G + +D Y++R + V+VP LCL A+DDP+ P A EAAA ++ VV +A+T+ G H GW G SW+ V
Sbjct: 433 LVDFNEVLACNTLHEFERALMLPICGVADLDAYYERNNCKTA--LQHVSVPLLCLSARDDPIIGPRLLRHA-EAAAAANPRVV-LAVTKRGGHLGWLAGWRGHSWMMDV 537
BLAST of mRNA_E-fasciculatus_F_contig11074.856.1 vs. uniprot
Match: A0A8H7DJQ0_9AGAR (AB hydrolase-1 domain-containing protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H7DJQ0_9AGAR) HSP 1 Score: 57.4 bits (137), Expect = 3.980e-5 Identity = 52/174 (29.89%), Postives = 82/174 (47.13%), Query Frame = 1
Query: 202 DAPVVFVLFGVVGGVDVFYIRYLATHLSTKY-----GYRVVTKNWRGIGLGVSTRRPETWDHAALSDRRGAIKHLRRTVEGHVPVLGVGFSFGGCVLTAIAGMAPQEANGLCGLVSIFGL-FDMPA-----MMKHIAEQYAYPYGFANTKVTV-KNYRKFKVLETLTAEADASV 687
DAP++ V G+ GG YIR + + GYR V N+RG GV P+ + A D R A+ ++ + H P+LG+GFS GG VLT +A + A+ L I G +D+ A + + + Y G +T+ K +R+ + + TA+A +V
Sbjct: 121 DAPIIVVQHGLTGGSHEPYIRAVLAPACSPVEQGGLGYRAVVVNFRGCS-GVPITSPKFYTAAQTDDLRQALMYISKLYP-HAPLLGLGFSIGGNVLTRY--LAEEGADSLLRSACILGCPWDLKANNDYLLYNNTLGKRLYLRGMGENVITIMKQHRQVFLADPRTAKAAHTV 290 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11074.856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11074.856.1 >prot_E-fasciculatus_F_contig11074.856.1 ID=prot_E-fasciculatus_F_contig11074.856.1|Name=mRNA_E-fasciculatus_F_contig11074.856.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=497bp MQSFMFATWCPPCDRAMVSRLVSRKTGRIRVETPCFPSSWSCVAARLAAAback to top mRNA from alignment at E-fasciculatus_F_contig11074:48..3989- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11074.856.1 ID=mRNA_E-fasciculatus_F_contig11074.856.1|Name=mRNA_E-fasciculatus_F_contig11074.856.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3942bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11074:48..3989- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11074:48..3989- >mRNA_E-fasciculatus_F_contig11074.856.1 ID=mRNA_E-fasciculatus_F_contig11074.856.1|Name=mRNA_E-fasciculatus_F_contig11074.856.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2982bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11074:48..3989- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |