mRNA_E-fasciculatus_F_contig1106.849.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: D7FIS6_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS6_ECTSI) HSP 1 Score: 585 bits (1507), Expect = 2.560e-198 Identity = 284/297 (95.62%), Postives = 290/297 (97.64%), Query Frame = 3
Query: 1005 MQGETFAHKSGKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDALKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLVQRPEGNIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQGYGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGYDLAMQSESMELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAAANTKAGR 1895
MQGETFAHKSGKSAVVRQPETEEERRGAYRAM ACPTSSIRVEASDP+ARDALKDFPFPVDSERLPGVFHLGFH ESSFGCSPWLVQRPEGN+MMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMH ADVQ YGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHS+GS+TLLY GNNKSAH A +GGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGYDLAMQSES+ELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAAANTKAGR
Sbjct: 1 MQGETFAHKSGKSAVVRQPETEEERRGAYRAMHACPTSSIRVEASDPIARDALKDFPFPVDSERLPGVFHLGFHGESSFGCSPWLVQRPEGNMMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHKADVQRYGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSRGSVTLLYHGNNKSAHPAAEGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGYDLAMQSESIELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAAANTKAGR 297
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: A0A7S2WU26_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU26_9STRA) HSP 1 Score: 295 bits (754), Expect = 1.170e-86 Identity = 164/337 (48.66%), Postives = 211/337 (62.61%), Query Frame = 3
Query: 924 TKARRAENVAGNLFVDESCIDCDTCRWMQ----GETFAHKSGKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDALKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLVQ---RPEG----NIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQG-----YGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGYDLAMQSESMELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAAANTK 1886
TK R +NVAG+LFVD SCIDCDTCRWM G T A G+S V +QPE++ ER+ AY AM+ACPT SIR+E DP+ R+ + FP +D +PGVFHLGFHDE SFG +P+LV + E N+MMD+PRF LAK +DA GG+ +LSH DDV ++WK RFP +KRVMH AD+ Y DT ++EIKL GS W+L GL A+HTPGHS+GS+T + A +A GG E AFTGDHL S R G + G RYG+D +Q++S+ LA D +F WILPGHGR +F ++ +R + I AA + K
Sbjct: 38 TKQRHPQNVAGSLFVDHSCIDCDTCRWMSSTVFGRTKAGLGGQSVVYKQPESDAERKDAYAAMVACPTGSIRLETPDPLMREVIGSFPRLIDPS-MPGVFHLGFHDEMSFGATPYLVAGFAKDEAGNPVNVMMDTPRFSERLAKAIDAVGGLHYYLLSHKDDVASMEKWKARFPGVKRVMHEADITTTQQWPYIDTTSVEIKLP--------GSEREWKLLPGLSAIHTPGHSQGSVTFI-------ASAAFTGG-----EACAFTGDHLCFSSRLGRIDGMGRYGWDTNLQADSIRRLA--DEEFLWILPGHGRRYQFRDETERHAAITKAADDFK 351
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: A0A7R9U5M7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5M7_9STRA) HSP 1 Score: 283 bits (724), Expect = 1.340e-82 Identity = 157/329 (47.72%), Postives = 202/329 (61.40%), Query Frame = 3
Query: 918 SLTKARRAE---NVAGNLFVDESCIDCDTCRWMQGETFAHKS--GKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDALKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLV--QRPEG---NIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQGYGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGYDLAMQSESMELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAA 1874
S+T +R+A NV GN FVD +CIDCDTCRWM +TF S G+S V QP TEEE A +AM+ CPT SIR + + + FP VDS+R+P VFHLG+ E SFG +LV + PEG NI+MDSPRF LAK LDA GGV MVLSH DDVGD RWKERFP+M+R+MH DV+ T + +D + Q+ W++ DG++ ++TPGHS+GS++L+ DG H+ DG +AFTGDHLALS R G L GF R+ D Q++SM LA D+ WILPGHGR F++ +R + AA
Sbjct: 27 SMTLSRKAAHPGNVDGNFFVDHTCIDCDTCRWMAPKTFGRVSSGGQSVVYSQPATEEETTKALQAMVTCPTGSIRTRKPEKMVKTVRDSFPLAVDSKRIPQVFHLGYASEKSFGAVAYLVTSKTPEGEPFNILMDSPRFSSHLAKALDAVGGVQYMVLSHKDDVGDMNRWKERFPDMQRIMHKVDVR----TEHQWPYIDMTGVERQLEGSGPWEVADGVKIVYTPGHSQGSVSLIVDGE----HTGGDG--------VAFTGDHLALSARLGRLDGFARFSDDTDQQADSMAKLADEDIL--WILPGHGRRHSFDSALEREEGLRAAA 337
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: A0A7S1TZA2_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZA2_9STRA) HSP 1 Score: 280 bits (715), Expect = 4.040e-81 Identity = 156/334 (46.71%), Postives = 197/334 (58.98%), Query Frame = 3
Query: 927 KARRAENVAG-NLFVDESCIDCDTCRWMQGETFAHKS------GKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDALKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLVQRPEG-----NIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQG-----YGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGYDLAMQSESMELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAAA 1877
+A NVA N +VD+ CIDCD CRWM F S G+S V +P+T EE+ A RAM ACPT+SI + ARDA FP VD+ RLP VFHLG+H E+SFG + + V + NIM DSPR+ P LAK L+A GGV LMV+SH DDV + +WK RFP+M+RVMH ADV+G Y D +E +L D W+L G++ +HTPGHS GSITL+ G+ GG +G+AFTGDHLALS R G L GF YG D +Q++SME L D F W+LPGHGR +RFE+ R ++ A A
Sbjct: 33 RAPHEANVANANFYVDKRCIDCDVCRWMAPAAFGRTSPTVGGAGQSYVYAEPQTPEEKTAALRAMSACPTASIHTRKPEAAARDAAGSFPLVVDAARLPRVFHLGYHSEASFGATSYFVATKDAGGDPFNIMFDSPRYVPALAKNLEAAGGVQLMVVSHKDDVAEMNKWKARFPDMQRVMHAADVRGEDRWPYIDMTGVEQQLTGDGP---------WELAPGVKVVHTPGHSAGSITLILSGS-------VTGG-----DGVAFTGDHLALSARLGRLDGFAAYGDDHKLQADSMEKLVDED--FLWVLPGHGRRLRFEDAAARERELREAGA 343
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: A0A812PBH6_SYMPI (Cgt protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812PBH6_SYMPI) HSP 1 Score: 275 bits (704), Expect = 3.890e-75 Identity = 154/323 (47.68%), Postives = 194/323 (60.06%), Query Frame = 3
Query: 945 NVAGNLFVDESCIDCDTCRWMQGETFAHKS----GKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDALKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLVQ----RPEGNIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQG-----YGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGYDLAMQSESMELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAA 1874
NV G +VD +CIDCDTCRWM TF + G+S V +QPE E A +AM++CPT SIR +D L FP VD ERLP VFHLG+H SFG + + ++ + N+M DSPR+ LA L+A GGV LMVLSH DDV DH+RWKERFP M RVMH DV+G Y D IE++LD D WQL +GL+ ++TPGHS GSITL+ D GG +G+AFTGDHLAL+GR G L GF RY D + Q++S++ LA ++ WILPGHGR IRFE+ R ++ AA
Sbjct: 221 NVEGTFYVDHTCIDCDTCRWMAPGTFGRTTHAPGGQSYVYQQPEGTPEVDAAVQAMISCPTGSIRTSTPLTKTKDVLDTFPILVD-ERLPQVFHLGYHSPKSFGAASYFLKGGTDKSPYNVMYDSPRYSSRLANLLEAAGGVQLMVLSHKDDVADHERWKERFPAMTRVMHQQDVRGPSSWPYIDMTGIEMQLDGDGP---------WQLEEGLKVVYTPGHSAGSITLIADATRT--------GG----DGVAFTGDHLALNGRLGRLDGFARYSDDTSQQADSIQKLAEEEVL--WILPGHGRRIRFEDPTSRERELQRAA 519
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: A0A5N6R0G6_9ROSI (Lactamase_B domain-containing protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6R0G6_9ROSI) HSP 1 Score: 260 bits (664), Expect = 3.160e-74 Identity = 135/319 (42.32%), Postives = 188/319 (58.93%), Query Frame = 3
Query: 927 KARRAENVAGNLFVDESCIDCDTCRWMQGETFAHKSGKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDALKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLVQRPEGNIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQGYGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGY-DLAMQSESMELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAAAN 1880
K RR +NV G FVD +CIDCDTCRWM + F SAV +QP EEER A +A+L+CPT+SI E P R K FP P+D +R+PGV+H G+H E S+G + +L+ PEGNI++DSPRF LA +D GG M L+H DD+ DH+RW +R + R++H+ DV+G T N+EIKL+ W LG ++ ++TPGHS+GS+ L Y KS I FTGDHLA++ L+ F +Y Y + +Q +S+ L DL F+W+LPGHGR I F++ +++ S + N
Sbjct: 66 KQRRPQNVDGEFFVDHTCIDCDTCRWMAPQIFTRVDELSAVFKQPTCEEERLKALQALLSCPTNSIHTEKPAPDIRQVQKTFPHPIDEQRIPGVYHCGYHSEKSYGATSYLIVHPEGNILVDSPRFTERLAHNIDMLGGARYMFLTHKDDIADHERWSKRL-SCDRILHSLDVEG--STANVEIKLEGSGP---------WSLGQDIQLIYTPGHSEGSVCLFY----KSLK-------------ILFTGDHLAMA--ESGLSIFEQYNYCSVPLQLKSIRALL--DLDFKWVLPGHGRRIEFKDHQEKNSTLEAFVQN 351
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: A0A1Y1IAW0_KLENI (Metallo-beta-lactamase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAW0_KLENI) HSP 1 Score: 260 bits (665), Expect = 5.660e-74 Identity = 141/314 (44.90%), Postives = 188/314 (59.87%), Query Frame = 3
Query: 927 KARRAENVAGNLFVDESCIDCDTCRWMQGETFAHKSGKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDALKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLVQRPE-GNIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQGYGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYG-YDLAMQSESMELLARPDLKFRWILPGHGRMIRFENDEDRASQI 1862
KARRAENV G+ FVD +CIDCDTCRWM ETF+H +G+SAV RQP+T +ER A +A+LACPT+SIR E +DA FP +D E LPGV+H G+H E+S+G + + V RPE GNI++DSPRF LAK ++ GGV M L+H DDV DH +W RF +R++H DV+ TR++E KL+ W L + + +HTPGH+ G ++L Y H A FTGDHLA S R L+ F Y ++ Q +S+ L L F W+LPGHGR FE++ DR ++
Sbjct: 97 KARRAENVEGDFFVDHTCIDCDTCRWMAPETFSHLNGQSAVHRQPQTPDERTRALQALLACPTASIRTETPPKDIKDAQNTFPLAIDPETLPGVYHSGYHSENSYGATSYFVHRPERGNILIDSPRFTEVLAKRIEQMGGVRYMFLTHQDDVADHAKWAARF-GCERIIHEDDVRS--STRDVERKLEGSGP---------WTLDEEVELIHTPGHTAGCVSLFYK-----PHKA------------LFTGDHLAYSRRQEGLSIFRGVNWYSVSKQIDSVRKLI--PLDFLWLLPGHGRRYHFESEADRREKL 379
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: A0A2U1N2D3_ARTAN (Metallo-beta-lactamase family protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1N2D3_ARTAN) HSP 1 Score: 257 bits (657), Expect = 1.700e-73 Identity = 136/321 (42.37%), Postives = 188/321 (58.57%), Query Frame = 3
Query: 918 SLTKARRAENVAGNLFVDESCIDCDTCRWMQGETFAHKSGKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDALKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLVQRPEGNIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQGYGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYG-YDLAMQSESMELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAAA 1877
S K RR ENVAG FVD +CIDCDTCRWM E F + SAV +QP ++ER A +A+L+CPTSSI E +A K FP P+D +R+PGV+H G+H + S+G + +L+ PEGNI++DSPR+ LA ++ GGV M L+H DDV DH++W +RF +RV+H+ +VQ TRN+EIKLD W LG+ ++ +HTPGH++GS+ L Y FTGDHLAL L RY Y + +Q +S+ +L + D F WILPGHGR + F++ E++ + I A
Sbjct: 44 SSRKQRRPENVAGEFFVDHTCIDCDTCRWMAPEVFTRVNDMSAVKKQPSCQDERLKALQALLSCPTSSISTEKPARDILEAQKTFPLPIDIDRIPGVYHCGYHSDKSYGAASYLIVHPEGNILVDSPRYTERLASNIEKMGGVRYMFLTHKDDVADHEKWSKRF-KCERVLHSTEVQD--STRNVEIKLDGSGP---------WDLGEDIQLIHTPGHTEGSVCLFYKPLK-----------------ALFTGDHLALE--DSQLYISERYNFYSVPIQLDSVAMLLKLD--FEWILPGHGRRVAFKDVEEKNANIKAFLA 331
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: A0A1R3GM35_COCAP (Beta-lactamase-like protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3GM35_COCAP) HSP 1 Score: 253 bits (645), Expect = 1.420e-71 Identity = 131/330 (39.70%), Postives = 187/330 (56.67%), Query Frame = 3
Query: 888 VSSSPTMVAGSLTKARRAENVAGNLFVDESCIDCDTCRWMQGETFAHKSGKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDALKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLVQRPEGNIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQGYGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGYDLAM---------QSESMELLARPDLKFRWILPGHGRMIRFENDEDR 1850
V S G + RR +NV G+ FVD +CIDCDTCRWM + F G SAV +QP +E+R A +A+L+CPTSSIR E P + K FP P+D ++LPGV+H G+H E S+G +P+L+ PEGNI++DSPRF LA+E++ GGV M L+H DDV DH++W +RF R++H+ DV+ T ++E+KL+ W LG+ + +HTPGH++G++ LLY + I FTGDHL + YG D+ Q +S++ L D F WI+PGHGR I F++ E++
Sbjct: 46 VQSPAESATGKWVRQRRPQNVDGDFFVDHTCIDCDTCRWMAPQVFTRVDGMSAVYKQPTCKEDRLKALQALLSCPTSSIRTEVPPPDILETQKTFPIPIDEKKLPGVYHCGYHSEKSYGATPYLIVHPEGNILIDSPRFTERLAREIEMLGGVRYMFLTHKDDVADHRKWSKRF-GCDRILHSQDVEDC--TIDVEVKLEGSGP---------WSLGEDIMLIHTPGHTEGTVCLLYKSHK-----------------ILFTGDHLIMR----------EYGLDIMEIYNKSSVPEQVDSVKKLLEFD--FTWIIPGHGRRIEFKDAEEK 334
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Match: A0A1D1XPQ9_9ARAE (Beta-lactamase-like protein 2 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XPQ9_9ARAE) HSP 1 Score: 252 bits (644), Expect = 1.730e-71 Identity = 144/364 (39.56%), Postives = 199/364 (54.67%), Query Frame = 3
Query: 810 AFKPAGGPARRLRDVRGAAVLGPARRVSSSPTMVAGSLTKARRAENVAGNLFVDESCIDCDTCRWMQGETFAHKSGKSAVVRQPETEEERRGAYRAMLACPTSSIRVEASDPVARDA--LKDFPFPVDSERLPGVFHLGFHDESSFGCSPWLVQRPEGNIMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQRWKERFPNMKRVMHNADVQGYGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSKGSITLLYDGNNKSAHSAPDGGGSAQAEGIAFTGDHLALSGRTGALTGFPRYGY-DLAMQSESMELLARPDLKFRWILPGHGRMIRFENDEDRASQIMVAAANTKAG 1892
+ PAGG RR+ GA S+P + + RR +N G +VDE CIDCDTCRWM ETF +SAV +QP +EER A +A+++CPT+SI E R+ + FP P+D + +PGV+H G+H E S+G + +L+ PEGNI++DSPR+ LA+ +D GG M L+H DDVGDHQ W +RF +R++H ADV+ T +IE L D W +G ++TPGHSKGS+ L Y I FTGDHLA S +G LT F +Y + + MQ S+ D+ F WILPGHGR +RF++ E++ S + A +AG
Sbjct: 33 SLTPAGGSRRRMIPATGA----------STPAATTPTALRRRRPQNAEGEFYVDERCIDCDTCRWMAPETFTRIGEQSAVFKQPSCKEERFRALQALISCPTASIHTEKPPREIREGEVQRTFPLPIDEQSIPGVYHCGYHSERSYGATSYLIIHPEGNILVDSPRYTEILARSIDLLGGAPYMFLTHKDDVGDHQMWSKRF-GCERILHLADVEP--STADIETHLHGDGP---------WSIGADFELIYTPGHSKGSVCLFYKPLK-----------------ILFTGDHLARSEESG-LTIFEQYNHCSVKMQLTSVRKFL--DMDFLWILPGHGRRVRFKDMEEKNSVLESFLALQRAG 354 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1106.849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1106.849.1 >prot_E-fasciculatus_F_contig1106.849.1 ID=prot_E-fasciculatus_F_contig1106.849.1|Name=mRNA_E-fasciculatus_F_contig1106.849.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=412bp MSRSRPACYSGTQAMHGALLLLLVLGPRLEVGATAHGPSKGLCWINGGAFback to top mRNA from alignment at E-fasciculatus_F_contig1106:10440..19771- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1106.849.1 ID=mRNA_E-fasciculatus_F_contig1106.849.1|Name=mRNA_E-fasciculatus_F_contig1106.849.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9332bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1106:10440..19771- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1106:10440..19771- >mRNA_E-fasciculatus_F_contig1106.849.1 ID=mRNA_E-fasciculatus_F_contig1106.849.1|Name=mRNA_E-fasciculatus_F_contig1106.849.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2472bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1106:10440..19771- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |