mRNA_E-fasciculatus_F_contig11058.846.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: D8LI16_ECTSI (NAGPA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI16_ECTSI) HSP 1 Score: 664 bits (1714), Expect = 3.880e-226 Identity = 421/485 (86.80%), Postives = 429/485 (88.45%), Query Frame = 1
Query: 4 LSPASDTSRAFEAVRRTAPLLDGESPEDARVRLDLDAREEAWRAAGXXXXXXXXXXXXXXXXXXXXXXXXGGSCAVGHLVGAGQVYQAEEGTALVSFGIRGDSFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXX--GGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVHLDPPPLIEGAGGVDSTPSPTLQPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDNTEEVRLQWTRELCGGNSTGNATSLWEHLDDVEESVLRYKIAFWVAAVLGMASLYLNIQHQKSNSSSTSRSAELGGSAYSRQLQQQ-HVGLVNGGTVKTGTGPT-SPTGIVEMVGRGG 1446
LSPAS TSR FEAVRRTAPLLDGESPEDARVRLDLD+RE AWRAAG GGSCAVGHLVGAGQV+QAEEGTA+VSFG+RGDSFVVGTITAEEV DEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLD D XXXXXXXXXXXXXXXXXXXXXX GGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPA PCST E DSDSYGGF DGS LPRCEIPVSSIVCVHLDPPPLIEGA G+D TPSP+LQP SXXXXXXXXXXXXXXXXXXXXXXXXXXX SGDNTEE RL+WTRELCGGN TGNATSLWEHLD+VEESVLRYKIAFWVAAVLGMASLYLNIQHQKSNSSSTSRSAELGGSAYSRQLQQQ HVGLVNGGTVKTGT T SPTGIVEMVGRGG
Sbjct: 546 LSPASQTSRGFEAVRRTAPLLDGESPEDARVRLDLDSREAAWRAAGGGNGCQAAAAGGMLPPLSGD----GGSCAVGHLVGAGQVFQAEEGTAMVSFGVRGDSFVVGTITAEEVLDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDDDXXXXXXXXXXXXXXXXXXXXXXXXEGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAGPCSTSAE---------DSDSYGGFRDGSALPRCEIPVSSIVCVHLDPPPLIEGAEGIDGTPSPSLQPTSXXXXXXXXXXXXXXXXXXXXXXXXXXX-SGDNTEEARLRWTRELCGGNGTGNATSLWEHLDNVEESVLRYKIAFWVAAVLGMASLYLNIQHQKSNSSSTSRSAELGGSAYSRQLQQQQHVGLVNGGTVKTGTSSTKSPTGIVEMVGRGG 1016
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: A0A6H5KPM3_9PHAE (NAGPA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPM3_9PHAE) HSP 1 Score: 462 bits (1190), Expect = 1.200e-156 Identity = 325/432 (75.23%), Postives = 335/432 (77.55%), Query Frame = 1
Query: 280 ALVSFGIRGDSFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVHLDPPPLIEGAGGVDSTPSPTLQPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDNTEEVRLQWTRELCGGNSTGNATSLWEHLDDVEESVLRYK---------------------------IAFWV---------AAVLGMASLYLNIQHQKSNSSSTSRSAELGGSAYSRQLQQQ-----HVGLVNGGTVKTGTGPT-SPTGIVEMVGRGGG 1449
A+VSFG+RGDSFVVGTITAEEV DE NPFQNLISGAGWLVRAGVNHVEASARDGHLD+LLD D XXXXXXXXXXXXXXXXXXXXX GGALDDLLVAKLARTAIGHDSEGRLILLQ G AAGSDQDTAIPDGLDLSELAD+LVEAGAVNAINLVGGAPSAMM DS SYGGF DGS LPRCEIPVSSIVCVHLDPPPLIEGA GVDSTPSP+LQP SXXXXXXXXXXXXXXXXXXXXXXXXXXX SGDNTEEVRLQWTRELCG N TGNATSLWEHLD VEESVLRYK + V AV+GMASLYLNIQHQKS+S ST+RSAELGG AYSRQLQ HVGLVNG TVKTGT T SPTGIVEM+GRGGG
Sbjct: 38 AMVSFGVRGDSFVVGTITAEEVLDEHNPFQNLISGAGWLVRAGVNHVEASARDGHLDVLLDDDXXXXXXXXXXXXXXXXXXXXXXEGGALDDLLVAKLARTAIGHDSEGRLILLQ--GKAAGSDQDTAIPDGLDLSELADMLVEAGAVNAINLVGGAPSAMMEEW------------------------DSGSYGGFTDGSALPRCEIPVSSIVCVHLDPPPLIEGAEGVDSTPSPSLQPTSXXXXXXXXXXXXXXXXXXXXXXXXXXX-SGDNTEEVRLQWTRELCGANGTGNATSLWEHLDSVEESVLRYKGDELPEEAELEIATDDEMLVVVPPRREVLMMVLNKEPTCLSCAVMGMASLYLNIQHQKSSSPSTARSAELGGGAYSRQLQXXXXXXXHVGLVNGATVKTGTSSTKSPTGIVEMIGRGGG 442
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: UPI00138FDC4B (N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FDC4B) HSP 1 Score: 98.6 bits (244), Expect = 3.790e-18 Identity = 64/201 (31.84%), Postives = 103/201 (51.24%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGDSFVV-GTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLV 816
G+C +G++V G++ +G +FGIR D +V G ++ V D++NPF L++G WLVR G +V AS + D+ G++D + ARTAIGHD++GR++++Q G + G+DL A++L++ G VNAINL GG + M+VNGS + P++ C +
Sbjct: 160 GNC-LGNIVSNGKLVMDADGVQNANFGIRKDGTIVTGYLSENTVLDQENPFVQLVTGVIWLVRNGEVYVNASKKAECEDL--------------------------QESGSVDLFVNVLAARTAIGHDAQGRVVIVQVDGKT--------LQRGMDLYSFAELLIKYGLVNAINLDGGGSTTMVVNGSVVNYPSDKCGDFI 325
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: UPI00096B63C3 (LOW QUALITY PROTEIN: N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096B63C3) HSP 1 Score: 96.7 bits (239), Expect = 7.080e-18 Identity = 73/239 (30.54%), Postives = 113/239 (47.28%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
G+C +G++V G++ ++ G +FGI+ D S VVG I EE+ ++ NPF+ L++G WLVR G N+V S + DH+D G +D + AR+AIGHD +GR++L + G G +L E ADVL++ G VNAINL GG + ++ +G + P++ C D + RC VS+++CVH
Sbjct: 183 GNC-LGNIVSDGRLVKSANGVQNANFGIKEDGSIVVGYIPEEELHNQTNPFRQLVTGVIWLVRNGTNYVNESK----IMECSDHEDT----------------------GPMDTFVNVISARSAIGHDDKGRVVLARVEGQTHVR--------GANLYEFADVLIKRGVVNAINLDGGGSNTLVQDGILLNYPSDHC-----------------------DHESQYRCAREVSTVICVH 363
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: UPI001CFAEA46 (N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFAEA46) HSP 1 Score: 97.4 bits (241), Expect = 9.650e-18 Identity = 72/234 (30.77%), Postives = 104/234 (44.44%), Query Frame = 1
Query: 232 GHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
G++V G++ Q+ G FGIR D + V G ++ EEV D++NPF L+SG WL+R G ++ S G D + A ARTA+GHD GRLI+ + G + GL L ELAD+L E G +NAIN+ GG S M+VNG+ P++ C D+D + C +S+++CVH
Sbjct: 170 GNVVSDGKLVQSAGGLQNAQFGIRKDGTLVFGYLSEEEVLDKKNPFVQLVSGVVWLLRNGEVYINQSKT--------------------------AECEKTEETGTFDVFINALSARTAVGHDKSGRLIMFHSDGKTGDT--------GLTLWELADLLKEKGVINAINMDGGGSSTMVVNGTLASYPSDKCK-------------DNDGW----------HCARSISTVLCVH 346
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: UPI0016043331 (N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016043331) HSP 1 Score: 95.1 bits (235), Expect = 1.020e-17 Identity = 75/239 (31.38%), Postives = 108/239 (45.19%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
G+C +G++V GQ Q G +FGIR D + VVG ++ ++V E NPF L+SG WLVR +V S DI G LD + ARTA+GHD EGR++L+ G G++L E AD L+ G VNA+NL GG + M++NG+ + P++ C+ D ++ RC VS+I+CVH
Sbjct: 132 GAC-LGNVVTDGQRVQDSGGIQNANFGIRKDGTIVVGYLSEQDVLREDNPFVQLVSGVIWLVRNATVYVNESRTTECADI--------------------------QETGTLDRFVNVVSARTAVGHDEEGRVVLVHIEGQTGDR--------GVNLWEFADYLLSLGLVNAVNLDGGGSATMVINGTVVNYPSDRCA-------------DDRAF----------RCARAVSTILCVH 312
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: UPI0008547745 (N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008547745) HSP 1 Score: 97.1 bits (240), Expect = 1.350e-17 Identity = 75/242 (30.99%), Postives = 112/242 (46.28%), Query Frame = 1
Query: 229 VGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH---LDPP 942
+G++V G++ Q+ +G FGIR D + V G ++ EEV D +NPF L+SG WL+R G ++ S + ++ D+ G D+ + ARTA+GHD++GRLIL G AG GL L E+A+ L G NAINL GG + +++NG+ P++ C ++ RC+ VS+IVCVH DPP
Sbjct: 183 LGNVVSNGRLVQSSKGIQNAQFGIREDGTMVFGYLSEEEVLDTENPFVQLVSGVVWLLRNGEVYIGQSKK-------VECDETQTT-------------------GNFDEFIDTMSARTAVGHDTKGRLILFHADGQTAGR--------GLSLWEMANFLKAQGVYNAINLDGGGSATLVLNGTLASYPSDHCLN-----------------------DSMWRCQRSVSTIVCVHEPYCDPP 367
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: UPI00074FE62C (N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FE62C) HSP 1 Score: 96.7 bits (239), Expect = 1.520e-17 Identity = 80/252 (31.75%), Postives = 110/252 (43.65%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH--LDPPPLIEGAG 963
G C +G++V GQ+ Q +G FGIR D + V G ++ EEV E+NPF L+SG WL+R G +V S RD G D + ARTA+GHD EGRL+LL G G GL+L E+A+ L + G VNAINL GG + +++NG+ P++ C + RC +S+I+CV L PP G G
Sbjct: 169 GEC-LGNIVSDGQLVQTSKGLQNAQFGIRQDGTLVFGYLSEEEVLAEENPFVQLVSGVVWLLRDGEVYVNQS-RD-------------------------LECSKTQTTGTFDTFIHTISARTAVGHDKEGRLVLLHVDGQTGGR--------GLNLWEMAEFLKQRGVVNAINLDGGGSATLVLNGTLASYPSDHCQP-----------------------DPMWRCPRQISTIMCVREPLCHPPDCSGRG 362
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: UPI0001CBA23F (N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA23F) HSP 1 Score: 94.7 bits (234), Expect = 2.250e-17 Identity = 69/239 (28.87%), Postives = 105/239 (43.93%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
GSC +G++V G++ +G FGIR D S G ++ ++ D+ NPF L+ G WLVR G ++V S G +D+ + AR A+GHD +GR++L+Q G G +L E A L++ G +NAINL GG + +VNG+ I P + C+ GS + RC+ PVS+++CVH
Sbjct: 157 GSC-LGNVVSDGRLVLDSQGIQNAHFGIREDGSLFFGYLSESDLVDKTNPFVQLVGGVVWLVRNGQSYVNTSR--------------------------YIECGDTEETGTVDEFIRVVAARMAVGHDKDGRVVLIQVDGETWKK--------GANLDEFAAFLIDLGIINAINLDGGGSATYVVNGTTINYPTDKCA-----------------------GSDMYRCDRPVSTVLCVH 337
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Match: A0A1X7THU2_AMPQE (Uncharacterized protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7THU2_AMPQE) HSP 1 Score: 96.3 bits (238), Expect = 2.660e-17 Identity = 73/239 (30.54%), Postives = 113/239 (47.28%), Query Frame = 1
Query: 217 GSCAVGHLVGAGQVYQAEEGTALVSFGIRGD-SFVVGTITAEEVQDEQNPFQNLISGAGWLVRAGVNHVEASARDGHLDILLDHDDXXXXXXXXXXXXXXXXXXXXXXGGALDDLLVAKLARTAIGHDSEGRLILLQTSGAAAGSDQDTAIPDGLDLSELADVLVEAGAVNAINLVGGAPSAMMVNGSAIVDPAEPCSTLVEGKRRIGGGGDSDSYGGFADGSTLPRCEIPVSSIVCVH 930
G+C +G++V G++ ++ G +FGI+ D S VVG I EE+ ++ NPF+ L++G WLVR G N+V S + DH+D G +D + AR+AIGHD +GR++L + G G +L E ADVL++ G VNAINL GG + ++ +G + P++ C D + RC VS+++CVH
Sbjct: 183 GNC-LGNIVSDGRLVKSANGVQNANFGIKEDGSIVVGYIPEEELHNQTNPFRQLVTGVIWLVRNGTNYVNESK----VMECSDHEDT----------------------GPMDTFVNVISARSAIGHDDKGRVVLARVEGQTHVR--------GANLYEFADVLIKRGVVNAINLDGGGSNTLVQDGILLNYPSDHC-----------------------DHESQYRCARKVSTVICVH 363 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11058.846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11058.846.1 >prot_E-fasciculatus_F_contig11058.846.1 ID=prot_E-fasciculatus_F_contig11058.846.1|Name=mRNA_E-fasciculatus_F_contig11058.846.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=522bp SLSPASDTSRAFEAVRRTAPLLDGESPEDARVRLDLDAREEAWRAAGGGNback to top mRNA from alignment at E-fasciculatus_F_contig11058:13..4522- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11058.846.1 ID=mRNA_E-fasciculatus_F_contig11058.846.1|Name=mRNA_E-fasciculatus_F_contig11058.846.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4510bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11058:13..4522- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11058:13..4522- >mRNA_E-fasciculatus_F_contig11058.846.1 ID=mRNA_E-fasciculatus_F_contig11058.846.1|Name=mRNA_E-fasciculatus_F_contig11058.846.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3132bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11058:13..4522- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |