mRNA_E-fasciculatus_F_contig11053.845.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: A0A6H5LDC1_9PHAE (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDC1_9PHAE) HSP 1 Score: 308 bits (789), Expect = 1.480e-94 Identity = 203/245 (82.86%), Postives = 209/245 (85.31%), Query Frame = 1
Query: 1 STLPGLKTRPGLHTWPVLTGSARFKGVKNNHRS---KGGGAVESSSRPPTCADANA------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGFTEPAVASDTPLEDAVKAGLRHHPSFAEVDTATTRKMIPSFFPPDEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPILWQDLIAPGEDLAGEAGTDEASPAPPATAPAESTTSSTTADASGPEKTPAQVTAAAADVPTTA 690
STLPGLKTRPGLHTWPVLTGSARFKGVKNNHRS KGGGAV SSS PPT A+AN XXXXXXXXXXXXXXXXXXXXXXXXXXX AGGFTEPAVASD PLEDA+KAGLRHHPSFAEVDTATTRKMIPSFFPPDE+KAKAL+LERCMRMLPQDQDTGGFFV+VMVKTGPILWQDLIAPGEDLAGEAG DEASP A A ES ST ADAS P+KTPAQVTAAA DVPTTA
Sbjct: 369 STLPGLKTRPGLHTWPVLTGSARFKGVKNNHRSNSGKGGGAVGSSSIPPTGAEANVCAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQAGGFTEPAVASDAPLEDAIKAGLRHHPSFAEVDTATTRKMIPSFFPPDEDKAKALRLERCMRMLPQDQDTGGFFVSVMVKTGPILWQDLIAPGEDLAGEAGIDEASPPTTAAAATESAIPST-ADASEPKKTPAQVTAAAGDVPTTA 612
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: D8LLJ3_ECTSI (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ3_ECTSI) HSP 1 Score: 280 bits (715), Expect = 2.370e-85 Identity = 192/238 (80.67%), Postives = 196/238 (82.35%), Query Frame = 1
Query: 1 STLPGLKTRPGLHTWPVLTGSARFKGVKNNHRSKGG------GAVESSSRPPTCADANAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGFTEPAVASDTPLEDAVKAGLRHHPSFAEVDTATTRKMIPSFFPPDEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPILWQDLIAPGEDLAGEAGTDEASPAPPATAPA--ESTTSSTTADASGPEKTPAQVTAAAADVPTTA 690
STLPGLKTRPGLHTWPVLTGSARFKGVKNNHRS G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGFTEPAVASD PLEDA+KAGLRHHPSFAEVDTATTRKMIPSFFPPDE+KAKAL+LERCMRMLPQDQDTGGFFVAVMVKTGPILWQDLIAPGEDLAGEAG D PP TA A ES T ST ADAS PEKTPA+VTAAA DVPTTA
Sbjct: 213 STLPGLKTRPGLHTWPVLTGSARFKGVKNNHRSNSGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGFTEPAVASDAPLEDAIKAGLRHHPSFAEVDTATTRKMIPSFFPPDEDKAKALRLERCMRMLPQDQDTGGFFVAVMVKTGPILWQDLIAPGEDLAGEAGVD-----PPTTAAATTESATPST-ADASEPEKTPAKVTAAAGDVPTTA 444
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: A0A7S3YFN2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFN2_HETAK) HSP 1 Score: 77.4 bits (189), Expect = 2.370e-14 Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 265 EPAVASDTPLEDAVKAGLRHHPSFAEVDTATTRKMIPSFFPPDEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPILWQDLIAPGE 531
E A++ PL A K G + SF EV +K+ + FPP E+A AL LERCMR LP DQ+TGGFFVAV+ K P+ DL++ E
Sbjct: 3 EGEAAAEGPLGAAKKLGFKIWSSFEEVPEDRRQKLRATLFPPPPEEAAALHLERCMRFLPHDQNTGGFFVAVLEKVSPVSSTDLLSARE 91
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: A0A7S1BPV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPV2_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.930e-12 Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 301 AVKAGLRHHPSFAEVDTATTRKMIPSFFPPDEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPIL 504
A GL H+P + V ++ + FPP EE+ L LERCMR+LPQD DTGGFFVA+ KTGP++
Sbjct: 20 ATSLGLVHYPDVSAVPEGQRTRVKETLFPPTEEETAVLGLERCMRILPQDMDTGGFFVALFRKTGPLM 87
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: A0A7S2EVX4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVX4_TRICV) HSP 1 Score: 70.9 bits (172), Expect = 2.900e-11 Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 292 LEDAVKAGLRHHPSFAEV--DTATTRKMIPSFFPPDEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPI 501
L+ A AG H P+FA+V D R++ PS FPP EE+A L+RCMR LP D DTGGFFVA+ K P+
Sbjct: 83 LQRARDAGFEHFPAFADVPEDGNYRRRVRPSCFPPTEEEAAKFNLDRCMRCLPHDMDTGGFFVALFRKVRPL 154
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: A0A7S2B270_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B270_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.730e-11 Identity = 65/162 (40.12%), Postives = 79/162 (48.77%), Query Frame = 1
Query: 16 LKTRPGLHTWPVLTGSARFKGVKNNHRSKGGGAVESSSRPPTCADANAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGFTEPAVASDTPLEDAVKAGLRHHPSFAEVDTATTRKMIPSFFPPDEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPI 501
LK R G TW K N R+ GG A S PT A XXXXXXXXXXX P VA+ AV AGLR++PSF +V ++ FPP EEKAK + LERC+R +P D+DTGGFFVA++ K P+
Sbjct: 260 LKRRAGKSTWHFFEEGRHGKKKSNKKRNAGGSAKNSPESDPTPAPEAEKXXXXXXXXXXXDLP---------------------PVVAA------AVAAGLRYYPSFDDVPANFHGRVRQGMFPPTEEKAKLMHLERCIRCVPHDEDTGGFFVALLRKVRPM 394
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: A0A3B3QQF1_9TELE (tRNA (cytosine(34)-C(5))-methyltransferase n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QQF1_9TELE) HSP 1 Score: 71.2 bits (173), Expect = 3.060e-10 Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 331 SFAEVDTATTRKMIPSFFPP-DEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPILWQ----DLIAPGEDLAGEAGTDEASPAP 576
S++EV ++ ++ P+ FPP D EK K +KLERCMR+LP QDTGGFFVAV+VK P+ W + D+A A T A P P
Sbjct: 402 SWSEVPSSRHTQIRPTMFPPTDPEKLKEMKLERCMRILPHHQDTGGFFVAVLVKKAPMPWNRQYPKIRHKEADVAPSANTPPADPPP 488
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: A0A7M7N620_STRPU (tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N620_STRPU) HSP 1 Score: 70.1 bits (170), Expect = 7.610e-10 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 358 TRKMIPSFFPPDEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPILWQDLIAPGEDLAGEAGTDE 561
+R+ PSF+PP EE AK + L RC+R+LP DQDTGGFFVAV+ KT P+ W G+D + E+ ++
Sbjct: 431 SRRYKPSFWPPSEEDAKNINLTRCVRILPHDQDTGGFFVAVLQKTRPLPWMKQ---GKDSSQESAQED 495
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: A0A8J4THU4_CLAMG (tRNA (cytosine(34)-C(5))-methyltransferase (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4THU4_CLAMG) HSP 1 Score: 69.3 bits (168), Expect = 1.270e-9 Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 346 DTATTR--KMIPSFFPP-DEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPILW 507
D TTR ++ PS FPP D EK K+++LERCMR+LP Q+TGGFFVAV+VKT P+ W
Sbjct: 388 DVPTTRHTQIRPSMFPPTDPEKLKSMQLERCMRILPHHQNTGGFFVAVLVKTAPMPW 444
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Match: A0A6J2WK60_CHACN (tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WK60_CHACN) HSP 1 Score: 68.9 bits (167), Expect = 1.800e-9 Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 334 FAEVDTATTRKMIPSFFPP-DEEKAKALKLERCMRMLPQDQDTGGFFVAVMVKTGPILW 507
++EV T+ ++ P+ FPP D EK K++ LERCMR+LP Q+TGGFFVAV+VK GP+ W
Sbjct: 373 WSEVPTSRHTQIRPTMFPPTDPEKLKSMNLERCMRILPHHQNTGGFFVAVVVKKGPMPW 431 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11053.845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11053.845.1 >prot_E-fasciculatus_F_contig11053.845.1 ID=prot_E-fasciculatus_F_contig11053.845.1|Name=mRNA_E-fasciculatus_F_contig11053.845.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=279bp STLPGLKTRPGLHTWPVLTGSARFKGVKNNHRSKGGGAVESSSRPPTCADback to top mRNA from alignment at E-fasciculatus_F_contig11053:3..3255- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11053.845.1 ID=mRNA_E-fasciculatus_F_contig11053.845.1|Name=mRNA_E-fasciculatus_F_contig11053.845.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3253bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11053:3..3255- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11053:3..3255- >mRNA_E-fasciculatus_F_contig11053.845.1 ID=mRNA_E-fasciculatus_F_contig11053.845.1|Name=mRNA_E-fasciculatus_F_contig11053.845.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1674bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11053:3..3255- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |