mRNA_E-fasciculatus_F_contig1105.842.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: D7FLH3_ECTSI (SNF-1-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLH3_ECTSI) HSP 1 Score: 884 bits (2284), Expect = 2.620e-309 Identity = 488/538 (90.71%), Postives = 491/538 (91.26%), Query Frame = 3
Query: 1707 MARIFQQQRHWAGEQGGKKGINEGNQKTRQARQTRRPQSARASPPYPMAAXXXXXXXXXXXAHHPNPKPHTWVPATPANTPSALMAXXXXXXXXXXXXXSPNGGGKHSQAPAGGEXXXXXXXXXXXGGAYARLFGMKHPGAHRRVGVDPLDGFKKDHYRGGAAAAASAS-AVDASAPFAGGDIGGVKHGQGTGVEAGGEVSKPRKPGGDVNAVETQATISTANTGSLTPPEGSSSAEGGRATGEGGIRAPPPVEPLTKASAECCSPQERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKNRRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLTLRQV 3317
MARIFQQQRHWAGEQGGKKGI EGN KTRQARQTRRPQSA +PP AA XXXXXXXXX HHPNPKPHTWVPATPA T SALM XXXXXXXXX SPN GGKHS A AGGE GGAYARLFGMKHPGAHRRVGVDPLDGFKKDHYRGGA AVDASAPF+G DIGGVKHGQG GVE EVSKPRK GD NAVETQATISTANTGSLTPPEGSSSAEGGRATGEGGIRAPPPVEPLTKASAECCSPQERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGR+NAKLVDFGFSANVKNRRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLTLRQV
Sbjct: 1 MARIFQQQRHWAGEQGGKKGIIEGNPKTRQARQTRRPQSAHTAPPCSTAAAVXXXXXXXXXXHHPNPKPHTWVPATPAKTSSALMXXXXXXXXXX----SPNSGGKHSHAVAGGEGKTSTAPATGRGGAYARLFGMKHPGAHRRVGVDPLDGFKKDHYRGGAXXXXXXXXAVDASAPFSG-DIGGVKHGQGAGVE---EVSKPRKAAGDTNAVETQATISTANTGSLTPPEGSSSAEGGRATGEGGIRAPPPVEPLTKASAECCSPQERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRSNAKLVDFGFSANVKNRRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLTLRQV 530
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: A0A835ZAG5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAG5_9STRA) HSP 1 Score: 337 bits (863), Expect = 2.140e-103 Identity = 160/246 (65.04%), Postives = 198/246 (80.49%), Query Frame = 3
Query: 2577 LGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKNRRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLTLRQ 3314
+G ++GEGSFA+VR A HKLTGQ VA+KTYE+AK+ D QWKRI QEV+LME+LNHPRV+RLFET E KR HL+ME GGNLC+YVKRR+RL+E EARR+L Q+L+ V+Y+H +I+HRD+KLEN+LL + N KLVDFGF+ +V R LHVFCGTPSY+ PEIIKR +Y GKPVD+WSLG+VLYA+LCGCFPFSG YP+LYK+IS+G +R+P+WL A L+ MLV DP RR TL Q
Sbjct: 1 MGVLLGEGSFAKVRRACHKLTGQAVAIKTYERAKVTDPQQWKRIQQEVRLMERLNHPRVVRLFETVEGPKRTHLIMEACSGGNLCTYVKRRRRLEEAEARRLLDQILQAVEYLHVREIIHRDLKLENILLDEA--RNVKLVDFGFATSVAQGRRLHVFCGTPSYIAPEIIKRTDYAGKPVDIWSLGIVLYALLCGCFPFSGATYPDLYKHISRGAYRIPEWLGGGASDLISCMLVLDPVRRATLSQ 244
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: A0A7S0JNW9_CAFRO (Hypothetical protein (Fragment) n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JNW9_CAFRO) HSP 1 Score: 322 bits (825), Expect = 2.020e-94 Identity = 161/269 (59.85%), Postives = 201/269 (74.72%), Query Frame = 3
Query: 2505 ERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKN-RRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLTL 3308
+R LR + + ++ DFY GKV+G+GSF +VR+AWH+L G +VA+K+YEK++IKD QWKR+ QE+KLME+LNHP V+RL ET E++KRIH+VMEYA GGNLCSYVK R+RL E EAR+I QLL V+YMHGL I+HRDIKLENVL S + KLVDFGFS ++ + L VFCGTPSYM PEI++R+EY G+PVD+WSLGV+LYA LCGCFPF YPELYK I+ R PD +S AA LVR ML DP +R+ L
Sbjct: 179 QRQRLRDFVSSPEFDGNATTDFYGFGKVLGQGSFGKVRLAWHRLAGAKVAIKSYEKSRIKDAAQWKRVQQEIKLMERLNHPYVVRLLETIENAKRIHIVMEYAGGGNLCSYVKARRRLPEAEARKIFLQLLLSVEYMHGLGIIHRDIKLENVLFDSS--RDMKLVDFGFSVACRDPNKRLKVFCGTPSYMAPEIVQRKEYLGRPVDIWSLGVLLYACLCGCFPFVAKTYPELYKRIAAAQLRFPDHVSNAAKDLVRRMLHPDPLKRIPL 445
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: A0A5A8EID9_CAFRO (Protein kinase domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EID9_CAFRO) HSP 1 Score: 322 bits (825), Expect = 6.520e-94 Identity = 161/269 (59.85%), Postives = 201/269 (74.72%), Query Frame = 3
Query: 2505 ERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKN-RRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLTL 3308
+R LR + + ++ DFY GKV+G+GSF +VR+AWH+L G +VA+K+YEK++IKD QWKR+ QE+KLME+LNHP V+RL ET E++KRIH+VMEYA GGNLCSYVK R+RL E EAR+I QLL V+YMHGL I+HRDIKLENVL S + KLVDFGFS ++ + L VFCGTPSYM PEI++R+EY G+PVD+WSLGV+LYA LCGCFPF YPELYK I+ R PD +S AA LVR ML DP +R+ L
Sbjct: 205 QRQRLRDFVSSPEFDGNATTDFYGFGKVLGQGSFGKVRLAWHRLAGAKVAIKSYEKSRIKDAAQWKRVQQEIKLMERLNHPYVVRLLETIENAKRIHIVMEYAGGGNLCSYVKARRRLPEAEARKIFLQLLLSVEYMHGLGIIHRDIKLENVLFDSS--RDMKLVDFGFSVACRDPNKRLKVFCGTPSYMAPEIVQRKEYLGRPVDIWSLGVLLYACLCGCFPFVAKTYPELYKRIAAAQLRFPDHVSNAAKDLVRRMLHPDPLKRIPL 471
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: A0A7S1GE77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE77_9STRA) HSP 1 Score: 296 bits (759), Expect = 1.320e-84 Identity = 149/273 (54.58%), Postives = 196/273 (71.79%), Query Frame = 3
Query: 2502 QERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKN-RRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLTLRQV 3317
Q+R L+RL+ R++ DFY+ GKV+G+GSF +VR+A H+L+G RVAVK+YEKAK+++ + W+R QE+ LME++NH +IR+ E ES KR+H+VMEYA GGNLC YVK ++RL E EAR I Q++ +Y+H + I+HRDIKLENVL KLVDFGFS ++ + L +FCGTPSYM PEI+ R+EY G+PVDVWSLGV+LYAMLCG FPF YPELYK I + RLPD LS A L++ ML D S+R++L QV
Sbjct: 218 QQRQRLKRLVASPSFDGRATTDFYKFGKVLGQGSFGKVRLAAHRLSGVRVAVKSYEKAKLQNPSHWRRAQQEIALMERMNHTHIIRMLECIESPKRVHIVMEYAGGGNLCQYVKAKRRLAEPEARAIFCQVMLATEYLHNVGIIHRDIKLENVLF--DDHRQMKLVDFGFSVGCRDPTKKLKIFCGTPSYMAPEIVMRREYLGRPVDVWSLGVLLYAMLCGVFPFVAKSYPELYKKIVQAQLRLPDHLSHAVKDLLQRMLCPDVSKRISLAQV 488
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: F0XYM1_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYM1_AURAN) HSP 1 Score: 290 bits (741), Expect = 3.040e-84 Identity = 142/274 (51.82%), Postives = 194/274 (70.80%), Query Frame = 3
Query: 2493 CSPQERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNH-PRVIRLFETAESS--KRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKNRRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLT 3305
C+P++R YL RLL+ + R DFY GKV+G GSF VR+AWHKLTGQ+VA+KTYE++K+KD QWKR+ QE ++MEKL+ P V R E E+ +R HL+ME+ GGNLCSYVK ++++ E E + ++ QL + +MH L+IVHRDIKLEN+L R +++DFGFS R L +FCGTPSYM PEI++R EY GKP+D+WS+GVV YA L G FPF+ PELY+ I +G +RLP+ LSP A++L++ +V D +RR+T
Sbjct: 35 CAPEQREYLTRLLVGSVQNRRGLPDFYSFGKVIGVGSFGTVRIAWHKLTGQKVAIKTYERSKMKDPQQWKRVQQEARVMEKLSDSPLVCRFLEAFETMAPRRAHLIMEFLPGGNLCSYVKAKRKIAEPELQPLMLQLATALHHMHELNIVHRDIKLENILFLDEKRTIVRVIDFGFSTRCAPDRRLRLFCGTPSYMAPEIVRRTEYRGKPIDLWSIGVVAYACLGGHFPFAARSQPELYRKILRGTYRLPEGLSPNAVALLQACIVVDVNRRVT 308
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: A0A7S4EAD8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAD8_9STRA) HSP 1 Score: 287 bits (734), Expect = 5.570e-80 Identity = 142/275 (51.64%), Postives = 190/275 (69.09%), Query Frame = 3
Query: 2493 CSPQERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHP----RVIRLFETAESSKRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKNRRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLT 3305
C+P +R YL RLL+ S R DFY GKV+G GSF VR+AWHKLTG++VA+KTYE++K+KD QWKR+ QE ++MEKL+ R + FET + +R HLVME+ GGNLCSYVK ++R+ EGE + +L QL +D+MH L+IVHRDIKLEN++ +++DFGFS R L +FCGTPSYM PEI++R EY GKP+D+WS GVV YA L G FPF+ P+LY+ I +G +RLP+ S A +L++ LV D +RR+T
Sbjct: 309 CAPDQRDYLARLLVQSTQSRRGLPDFYSFGKVIGVGSFGTVRIAWHKLTGRKVAIKTYERSKMKDPQQWKRVQQEARVMEKLSDSTLICRFLEAFETV-APRRAHLVMEFLPGGNLCSYVKAKRRISEGELQPLLVQLATALDHMHSLNIVHRDIKLENIIFLDERHKVVRIIDFGFSTRCAPDRRLRLFCGTPSYMAPEIVRRTEYRGKPIDLWSFGVVAYACLGGHFPFAARSQPDLYRKILRGTYRLPEGCSSGAAALLQQCLVVDVARRIT 582
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: A0A397BKJ6_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BKJ6_9STRA) HSP 1 Score: 273 bits (698), Expect = 1.490e-79 Identity = 145/281 (51.60%), Postives = 194/281 (69.04%), Query Frame = 3
Query: 2460 VEPLTKASAECCSPQERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEY--ADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKNRRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSR 3296
++ L A+ + ER + +LD ++LD Y LGKVVG G+F +VRVA HK++ Q VA+K+Y++++ KD QWKRI E KLMEKL+HP +IRLFET E+S ++H+VME +D GNLC +VKR+KRL E +A + Q++ V YMH + +VHRDIKLEN+LL G N KLVDFGFSA + FCGTP YM PEII R+ Y G+PVDVWSLGV+L+AMLCG FPF Y +LY+ I KG F +P +++P A +L+RGML DP++
Sbjct: 46 IQALATIVAKPANRPERDEICFSMLDEDNVHTTTLDGYVLGKVVGVGTFGKVRVATHKVSSQVVAIKSYKRSRTKDAAQWKRIQYEAKLMEKLDHPYIIRLFETIETSTKLHIVMENVSSDVGNLCEFVKRQKRLAEDDAGLLFMQVVSAVMYMHSMQLVHRDIKLENILLDRYG--NTKLVDFGFSAVQSTSKPFSTFCGTPCYMAPEIIHRKTYWGQPVDVWSLGVLLFAMLCGYFPFRARNYNDLYRKIVKGGFDIPGFVTPDAQALLRGMLEGDPTK 324
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: A0A6A4ZFE1_9STRA (Protein kinase domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZFE1_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.960e-79 Identity = 151/290 (52.07%), Postives = 199/290 (68.62%), Query Frame = 3
Query: 2460 VEPLTKASAECCSPQERLYLRRLLLDLQGSARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEY--ADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKNRRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLTLRQVNS 3323
++ L A+ + ER + +LD ++LD Y LGKVVG G+F +VRVA HK++ Q VA+K+YE+++ KD QWKRI E KLMEKL+HP +IRLFET E+S ++H+VME +D GNLC +VKR+KRL E +A + Q++ V YMH + +VHRDIKLEN+LL G N KLVDFGFSA + FCGTP YM PEII R+ Y G+PVDVWSLGV+L+AMLCG FPF Y +LY+ I KG F +P +++P A +L+RGML DP++RL L V S
Sbjct: 147 IQALATIVAKPANRPERDEICFSMLDEDNVHTTTLDGYVLGKVVGVGTFGKVRVATHKVSSQVVAIKSYERSRTKDAAQWKRIQYEAKLMEKLDHPYIIRLFETIETSTKLHIVMENVSSDVGNLCEFVKRQKRLAEDDAGLLFMQVVSAVMYMHSMQLVHRDIKLENILLDRYG--NTKLVDFGFSAVQSTSKPFSTFCGTPCYMAPEIIHRKTYWGQPVDVWSLGVLLFAMLCGYFPFRARNYNDLYRKIVKGGFDIPGFVTPDAQALLRGMLEGDPTKRLQLHDVRS 434
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Match: A0A7S3HTQ3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTQ3_9STRA) HSP 1 Score: 296 bits (757), Expect = 4.060e-79 Identity = 140/297 (47.14%), Postives = 206/297 (69.36%), Query Frame = 3
Query: 2469 LTKASAECCSPQERLYLRRLLLDLQG-------SARSSLDFYRLGKVVGEGSFAQVRVAWHKLTGQRVAVKTYEKAKIKDENQWKRISQEVKLMEKLNHPRVIRLFETAESSKRIHLVMEYADGGNLCSYVKRRKRLDEGEARRILRQLLEGVDYMHGLDIVHRDIKLENVLLGGSGRANAKLVDFGFSANVKNRRLLHVFCGTPSYMPPEIIKRQEYEGKPVDVWSLGVVLYAMLCGCFPFSGPRYPELYKNISKGVFRLPDWLSPAAISLVRGMLVTDPSRRLTLRQVNSCYCRS 3338
L+ + C+ ++ + LR+LL G S+ + +D Y +GKVVG GS+ +VR AWH+LT +VA+KTY+K+K+KD WKR+ E+K+ME+++HPR+ R++E E+ KR+HL+ME DGGNLCSYVK ++RL E E++RI Q+ + ++++H L + HRD+KLENVL + KL+DFGFS + + L VFCGTPSYM PEI++R EYEGKPVD+WS+G++LYA+LCGCFPF YP+LY+ I++G F +P+ LS L++ +L D + R+T +SC S
Sbjct: 1071 LSTVPNQFCTKRDAIELRKLLALSAGTRGGIVPSSSAVMDMYMVGKVVGVGSYGKVRAAWHRLTSSKVAIKTYDKSKLKDPAHWKRVHAEIKIMEQISHPRIARMYEAVETPKRMHLIMECLDGGNLCSYVKAKRRLSEDESKRIFFQIAQAIEHLHALGVSHRDVKLENVLFAND--RDIKLIDFGFSTVCQPGKRLKVFCGTPSYMAPEIVRRSEYEGKPVDMWSMGILLYALLCGCFPFRAKAYPDLYRRIARGTFPMPEELSAPVKDLLKQLLNVDAATRIT---AHSCLRHS 1362 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1105.842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1105.842.1 >prot_E-fasciculatus_F_contig1105.842.1 ID=prot_E-fasciculatus_F_contig1105.842.1|Name=mRNA_E-fasciculatus_F_contig1105.842.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1003bp MTTAATAARYQQTTKSREAYEAQQLAFLHRPFTASASRRSRPQSAGAGNWback to top mRNA from alignment at E-fasciculatus_F_contig1105:121..10267- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1105.842.1 ID=mRNA_E-fasciculatus_F_contig1105.842.1|Name=mRNA_E-fasciculatus_F_contig1105.842.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=10147bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1105:121..10267- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1105:121..10267- >mRNA_E-fasciculatus_F_contig1105.842.1 ID=mRNA_E-fasciculatus_F_contig1105.842.1|Name=mRNA_E-fasciculatus_F_contig1105.842.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=6018bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1105:121..10267- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |