mRNA_E-fasciculatus_F_contig11040.840.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: D7FRZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ1_ECTSI) HSP 1 Score: 128 bits (322), Expect = 2.870e-33 Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 1
Query: 1 PPFCPCERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFL-RWPTRNEQDSISDAFERRTGFR 234
P F PCERT+MVLYRLGHGAG R TAALFGVSDGWV+SCT EFI RV A L P+FL WPTRN+QD+IS AFERRTGFR
Sbjct: 71 PAFHPCERTAMVLYRLGHGAGARATAALFGVSDGWVTSCTCEFITRVTARLIPRFLWSWPTRNDQDNISAAFERRTGFR 149
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: A0A6H5JA50_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA50_9PHAE) HSP 1 Score: 118 bits (296), Expect = 1.290e-30 Identity = 54/117 (46.15%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 1 PPFCPCERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLRWPTRNEQDSISDAFERRTGFRDAMAAMDGSHIPVPSPSERDRGAYYNYKGFYSVILLAIV 351
P PCER ++ L+R+GHG+GVR TA+ F +++G V + T +R+ L +++RWP+ EQ IS A+E+ R + +DGSHI +P+P+E + AYYNYK FYS+ILLAIV
Sbjct: 36 PYIDPCERVAVFLFRVGHGSGVRATASHFNMAEGAVVNWTMSVARRIRKRLLCEYVRWPSPEEQSEISTAWEKEKSLRKVVGGIDGSHIKIPAPTEHQQLAYYNYKKFYSIILLAIV 152
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: A0A6H5JSG7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG7_9PHAE) HSP 1 Score: 106 bits (264), Expect = 3.180e-25 Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 1 PPFCPCERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLRWPTRNEQDSISDAFERRTGFRDAMAAMDGSHIPVPSPSERDRGAYYNYKGFYSVILLAIV 351
PPF PCER ++ ++RLG + VR TA FG+SDG VS T E +RV L + + WP+ EQ +S A+E R + A+DGSHI + +P + + +YYNYK FYS+ LLAIV
Sbjct: 9 PPFDPCERVAVFMWRLGGDSTVRQTALQFGLSDGTVSQVTLEVARRVDKYLRDECVWWPSPEEQRDMSAAWELEKHLRGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIV 125
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: A0A1E1XA83_9ACAR (Putative transposase (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XA83_9ACAR) HSP 1 Score: 83.6 bits (205), Expect = 1.630e-16 Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 1
Query: 19 ERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLRWPTRNEQDSISDAFERRTGFRDAMAAMDGSHIPVPSPSERDRGAYYNYKGFYSVILLAIV 351
+R ++ LYRL A R A LFGVS V+ +EF + L P+ +R+P+ N FE TGF A+DG HI V P E + YYNYKG+YS+ILLA+V
Sbjct: 107 QRVALSLYRLATSAEERTVAHLFGVSRPSVNIIFREFCDVIVDVLEPQVVRFPSLNNVRDHVRQFEACTGFPQGFGALDGCHIKVSPPKENAQD-YYNYKGWYSIILLAVV 216
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: UPI001889A618 (uncharacterized protein LOC119186492 n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI001889A618) HSP 1 Score: 79.7 bits (195), Expect = 4.880e-16 Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 13 PCERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLRWPTRNEQDSISDAFERRTGFRDAMAAMDGSHIPVPSPSERDRGAYYNYKGFYSVILLAIV 351
P +R + LY+L A R A LF V V++ ++F + V L ++++ T E FE TGFR + A+DG H P+ P E YYNYKG+YS+ILLA+V
Sbjct: 7 PEKRVGIALYKLCSSAEDRTVANLFAVGRSTVNTLYRQFCEAVVTVLEHEWIKMVTTEEMARHIQEFEAVTGFRQGVGALDGCHFPISPPKEHATD-YYNYKGWYSIILLALV 118
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: UPI001176274E (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=UPI001176274E) HSP 1 Score: 79.3 bits (194), Expect = 1.200e-15 Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 19 ERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLRWPTRNEQDSISDAFERRTGFRDAMAAMDGSHIPVPSPSERDRGAYYNYKGFYSVILLAIV 351
+R ++ +++L A R A LFGVS C K F V L P+ +++P +E +++ FE R G + A+DGSHIP+ +P E YYN KG+YS++L A+V
Sbjct: 16 QRVAIAVWKLATNADYRSIAHLFGVSRLIACKCLKAFCSAVEDILLPEAIQFPNADEPQEMANYFENRWGLPHCVGAIDGSHIPILAPQEYHT-EYYNRKGWYSIVLQAVV 125
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: UPI001887926C (uncharacterized protein LOC119185156 n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI001887926C) HSP 1 Score: 78.2 bits (191), Expect = 1.260e-15 Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 13 PCERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLRWPTRNEQDSISDAFERRTGFRDAMAAMDGSHIPVPSPSERDRGAYYNYKGFYSVILLAIV 351
P +R + LY L A R A LFGV V++ ++F + V A L + ++ T E FE TGFR + A+DG H P+ SP + YYNY+G+YS+ILLA+V
Sbjct: 7 PEKRVGIALYNLCSSAEDRTVANLFGVGRSTVNTLYRQFCEAVVAVLEHECIKMVTAEETARHIQEFEAVTGFRQGVGALDGCHFPI-SPPKGHVTDYYNYRGWYSIILLALV 118
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: A0A6P7VV54_IXOSC (uncharacterized protein LOC115325516 n=2 Tax=Ixodes TaxID=6944 RepID=A0A6P7VV54_IXOSC) HSP 1 Score: 79.7 bits (195), Expect = 2.200e-15 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 19 ERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLRWPTRNEQDSISDAFERRTGFRDAMAAMDGSHIPVPSPSERDRGAYYNYKGFYSVILLAIV 351
+R ++ +YRL A R LFGVS VS +EF + + L P+F+R+P ++ + F TGF + A+DG HI + P E Y+NYKG+YS+ILLA+V
Sbjct: 16 KRVAIGMYRLATSAEDRTVGNLFGVSRSSVSMIFREFCDVILSELEPRFVRFPKPDQLEDHMQRFTAVTGFPQGVGALDGCHIEICPPKEY-ASDYHNYKGWYSMILLAVV 125
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: A0A0K8TKD6_TABBR (Putative nuclease harbi1-like isoform x1 (Fragment) n=1 Tax=Tabanus bromius TaxID=304241 RepID=A0A0K8TKD6_TABBR) HSP 1 Score: 77.8 bits (190), Expect = 2.290e-15 Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 1
Query: 19 ERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLR-WPTRNEQ-DSISDAFERRTGFRDAMAAMDGSHIPVPSPSERDRGAYYNYKGFYSVILLA 345
+R ++ LY +G + R LFG+ V EF + V T PKFL +P E+ I D FE + GF A+DG+HI + P E Y+NYKG+YS++LLA
Sbjct: 54 KRVAVALYAIGSSSEYRTVGNLFGIGRTTVGEIVNEFCEAVWTTFQPKFLSTFPANQEKVKDIVDGFESKWGFPQCFGAVDGTHIEIQPPKEHATD-YFNYKGWYSIVLLA 163
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Match: UPI00189582D0 (uncharacterized protein LOC119381191 n=2 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI00189582D0) HSP 1 Score: 79.7 bits (195), Expect = 4.530e-15 Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1
Query: 1 PPFCPCERTSMVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLRWPTRNEQDSISDAFERRTGFRDAMAAMDGSHIPVPSPSERDRGAYYNYKGFYSVILLAIV 351
P +R ++ LYRL A A LFGV V+ +EF V TL ++LR R E F R +GF A+ A+DG HIPV SP E Y+NYKG+YS+ILLA+V
Sbjct: 138 PAVSVAKRIAIGLYRLRSTAEDATIAHLFGVGRSTVNVICREFFAAVIKTLEGQWLRMIRRAEMGEHIRKFHRVSGFPQAIGALDGCHIPV-SPPEEHATDYFNYKGWYSMILLALV 253 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11040.840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11040.840.1 >prot_E-fasciculatus_F_contig11040.840.1 ID=prot_E-fasciculatus_F_contig11040.840.1|Name=mRNA_E-fasciculatus_F_contig11040.840.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=107bp MVLYRLGHGAGVRPTAALFGVSDGWVSSCTKEFIKRVCATLTPKFLRWPTback to top mRNA from alignment at E-fasciculatus_F_contig11040:2267..2938- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11040.840.1 ID=mRNA_E-fasciculatus_F_contig11040.840.1|Name=mRNA_E-fasciculatus_F_contig11040.840.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=672bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11040:2267..2938- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11040:2267..2938- >mRNA_E-fasciculatus_F_contig11040.840.1 ID=mRNA_E-fasciculatus_F_contig11040.840.1|Name=mRNA_E-fasciculatus_F_contig11040.840.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=642bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11040:2267..2938- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |