mRNA_E-fasciculatus_F_contig10946.761.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10946.761.1
Unique NamemRNA_E-fasciculatus_F_contig10946.761.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 5.800e-149
Identity = 247/335 (73.73%), Postives = 256/335 (76.42%), Query Frame = 1
Query:   49 IDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGLRTLRFTMNDREPACLARVLLLLQLFFDSHDDL----------------LRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLN---------------------------------------------RLRCMWYVYADTSIAQIKPKKQLDKERKTYHDRTVFPSKNASPILLTGEGPGITAPKAMEWGTEMTGIHRQYQSWGYLDPFPVLRGGARS-DSKYYTKTNPAMVATDHEEL 867
            +DARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQ PDGLRTLRFTMNDREPACLARVLLLLQLF +SHDDL                LRACSP+ASPEQL AYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWS S VGSIAHIAGRSTLN                                             RLRCMWYVYADTSI QIKPKKQLDKERKTYHDRTVFPSKNASPILLTGEGPGI APKAMEWGTEMTGIHRQYQSWGYLDPFPVLRGGAR  +   + K NP + A  H+++
Sbjct:    1 MDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQDPDGLRTLRFTMNDREPACLARVLLLLQLFCNSHDDLVRGWGSERAVMVGRGGLRACSPNASPEQLHAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSMSPVGSIAHIAGRSTLNDSVWSMRAALVSGPSDVGPRTRSHPPYALIAVLRLPPTLWLRPCSRLRCMWYVYADTSIVQIKPKKQLDKERKTYHDRTVFPSKNASPILLTGEGPGIAAPKAMEWGTEMTGIHRQYQSWGYLDPFPVLRGGARRYEGGVHHKCNP-LSAFHHDDV 334          
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: A0A6A6P7W4_9PEZI (MYND-type zinc finger protein samB n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6P7W4_9PEZI)

HSP 1 Score: 72.8 bits (177), Expect = 3.880e-10
Identity = 84/299 (28.09%), Postives = 112/299 (37.46%), Query Frame = 1
Query:    1 YRKGCTPPEYLLGGVPIDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGL--RTLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLNRLRCMWYVYADTSIAQIKPKKQLDKERKTYHDRTVFPSKNASPILLTGEGPGIT--------APKAMEWGTEMTGIHRQYQSWGYLDPFPVLRGGARSDSKYYTKTNPAMVATDHEEL 867
            Y  G TP   L   +P    +AD+LLLGC DAR  LFT W             DG          Q  P  L  R L  T  D E A +AR +LL+    D                  D   +  A  +N YY+ +VD  +L      A +L   S S   W  S  GSI      +TL ++R +W  Y   S            ERK Y +R     + A  I     G  IT        AP  +    +++ ++  Y + G  D  P     AR+++KY    NP   A D   L
Sbjct:   17 YPTGNTPAVCLTQDLP-PKEKADVLLLGCGDARSILFTSWAD-----------DG----------QGKPSTLDPRPLDITCCDSEKAIIARNVLLMTCLLD------------------DEAGSGSATIWNIYYHCFVDKQSLNFLDTQAKKLCAMSTSMHEWHMSEYGSILRFCDSNTLAKVRDVWSSYCTPSTDP--------DERKRYDERLNTAVQTALQIKKERMGKNITLLTGVRSAAPGGVHCLQDLSNLYNDYWAHGITDRDPK----ARAEAKY---PNPMFFAQDTHTL 260          
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: A0A1V6QPZ5_9EURO (MYND-type zinc finger protein samB n=2 Tax=Penicillium TaxID=5073 RepID=A0A1V6QPZ5_9EURO)

HSP 1 Score: 69.7 bits (169), Expect = 3.810e-9
Identity = 68/283 (24.03%), Postives = 109/283 (38.52%), Query Frame = 1
Query:    1 YRKGCTPPEYLLGGVPIDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGLRTLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLNRLRCMWYVYADTSIAQIKP--KKQLDKERKTYHDRTVFPSKNASPILLTGEGPGITAPKAMEWGTEMTGIHRQYQSWGYLDPFPVLRGGARSDSKYYTKTNPAM 843
            Y  G TP   L   +P   ++AD+LLLGC D RH LFT+ T                        +QH    R L  T  D + A +AR ++LL L  D  D                   A   L +N +Y+  +D  +L   Q    +LL  S S  +W +S  G +  +  R +L R+R MW  Y +     +    KK+LD   +   +   F        +    G    AP  ++    +  +++ Y ++G  +     R  A + +  +   +  M
Sbjct:   14 YPIGNTPAVSLTQDLP-PKKKADLLLLGCGDVRHILFTVHT------------------------EQHGRDPRPLDITCCDVDTAVIARNIVLLSLVLDDVD------------------GANDQLIWNIFYHFRIDEGSLDLLQRQTTKLLSLSTSLHTWQQSEYGQVIRMCDRISLERVRDMWRFYGEKREGDVLRHFKKKLDDGMRVSQE---FQKSVIGDKMSVITGIRAAAPACLQATRALGDLYKNYWAFGTTETDKTTRSLAVNSNPMFAPKDGNM 250          
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: A0A0G4PAV2_PENCA (Str. FM013 n=1 Tax=Penicillium camemberti FM 013 TaxID=1429867 RepID=A0A0G4PAV2_PENCA)

HSP 1 Score: 68.2 bits (165), Expect = 1.180e-8
Identity = 68/282 (24.11%), Postives = 115/282 (40.78%), Query Frame = 1
Query:   10 GCTPPEYLLGGVPIDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGLRTLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLNRLRCMWYVYADTSIAQIKPK--KQLDKERKTYHDRTVFPSKNASPILLTGEGPGI--TAPKAMEWGTEMTGIHRQYQSWGYLDPFPVLRGGARSDSKYYTKTNPAM 843
            G TP   L   +P   ++AD+LLLGC D +H LFT+ T                        +QH    R L  T  D + A +AR ++L+ L  D                  D   A   L +N +Y+  +D  +L   Q    +LL  S S  +W +S  G +  I  R +L ++R MW  Y +     +  +  K+LD  R+   +   F + +   ++     P I  +AP  +E   ++  ++R + ++G  +    +R  A   +  +   N  M
Sbjct:   17 GNTPAVSLTQDLP-SKKKADLLLLGCGDVQHILFTVHT------------------------EQHGRDPRPLDVTCCDADTAVIARNIVLISLILD------------------DLNGANNQLIWNIFYHFRIDEGSLALLQTQTAKLLALSTSLRTWQQSQYGQMIRICDRVSLEQIRGMWGFYGEKRQGDVLRRFNKELDNGRRISLEFRKFFAGDRMNVV-----PEIRASAPVCLEATHDLGDLYRTFWAFGTTETDETVRSYAIHSNPMFGPNNGNM 250          
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: A0A1M2V2L4_TRAPU (MYND-type domain-containing protein n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V2L4_TRAPU)

HSP 1 Score: 66.6 bits (161), Expect = 3.710e-8
Identity = 74/275 (26.91%), Postives = 112/275 (40.73%), Query Frame = 1
Query:    1 YRKGCTPPEYLLGGVPIDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHP-----DGL------RTLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLNRLRCMWYVYADTSIAQIKPKKQLDKERKTYHDRTVFPSKNASPILLTGEGPGITAPKAMEWGTEMTGIHRQYQSWGYLDPFPVLR 792
            Y  G T    L   +P +   AD+LLLGC D RH L+T+++   +C             E    N+ HP     D L      R L FT  D +P+ LAR  LLL L  D+             P+Q+          +N +Y++Y+D  +L   ++   +L++AS S ASW  S  G    ++   TL  LR  W +Y D    Q  P  +L   R+ Y +           I  T    G    +A+    ++    R   +  + DP  + R
Sbjct:   14 YAIGNTAAVCLTRNLPPE-EHADILLLGCGDPRHVLYTVFSESDDC-------------EFPVVNEPHPKLVISDQLSVSTVSRKLDFTCCDIDPSVLARNALLLSLVADN------------VPQQM---------IWNIFYHLYLDQDSLSMLRSQCKKLVDASVSVASWRSSPYGVYLRVSTNHTLAELRRHWSLYIDM---QDLPTPRLASLREGYKNAFKKSLDAKGTITATARSAGPLTLEALSLSDQVMDYWRTGTT--FTDPKQIAR 248          
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: A0A8A1MC11_AJECA (Dihydrodipicolinate synthetase n=1 Tax=Ajellomyces capsulatus TaxID=5037 RepID=A0A8A1MC11_AJECA)

HSP 1 Score: 64.7 bits (156), Expect = 1.430e-7
Identity = 69/292 (23.63%), Postives = 113/292 (38.70%), Query Frame = 1
Query:   10 GCTPPEYLLGGVPIDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGLRTLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLNRLRCMWYVYADTSIAQIKPKKQLDKERKTYHDRTVFPSKNASPILLTGEGPGIT-----APKAMEWGTEMTGIHRQYQSWGY---------LDPFPVLRGGARSDSKYYTKTNPAM 843
            G TP   L   +P D   A +LLLGC D RH LFT +   S             SE R            +L +T  D +PA +AR +LLL L  D+++ +                   +++ ++ YY+++VD+ +L   ++  N+L   S S   W ++  G         TL  +R +WY Y   S          DK   T   R    +      + +G G  ++     AP  ++   ++  +H +Y   G          + P P L       S  +  T+P +
Sbjct:   17 GNTPAVCLTQDIPGD-EPASLLLLGCGDVRHILFTSYMNSS-------------SEPR------------SLDYTCCDSQPAVIARNVLLLTLVVDNNEGV------------------DVSILWDIYYHLFVDDKSLSVLESQVNKLYRLSTSLRHWHKTKYGRFLRFCDSKTLALVRDVWYSYIHVS----------DKAAYTTSFRNAIQTCLDVKAVASGSGIDLSGVRSAAPNGVQALKDIPSLHARYWKNGTTSSGSKAANVHPNPTLAPLENGSSLLHYATDPLL 254          
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: A0A423WM13_9PEZI (MYND-type zinc finger protein samB n=1 Tax=Valsa sordida TaxID=252740 RepID=A0A423WM13_9PEZI)

HSP 1 Score: 64.7 bits (156), Expect = 1.550e-7
Identity = 72/246 (29.27%), Postives = 98/246 (39.84%), Query Frame = 1
Query:    1 YRKGCTPPEYLLGGVPIDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGLRTLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLNRLRCMWYVYADTSIAQIKPKKQLDKERKTYHDRTVFPSKNASPILLTGEGPGITAPKAMEW--GTEM 732
            Y  G TP   L   +P     AD+LLLGC D RH L+T +              G  S              R L  T  D E A +AR +L L L  D                     S +  L +N YY++++D  T +  Q    +LL AS S A WS+S  G+       STL  LR +W  YA+    +   + + + E    H  T   +K A   L+ G G    AP  M+   GTE+
Sbjct:   14 YAVGNTPAVSLTRCLP-QGVDADILLLGCGDVRHILYTAYAE-----------KGFPS--------------RKLDITCCDVEDAIVARNVLFLTLLTDY------------------GKSIQPQLLWNVYYHLFLDEETTEVLQQHVTKLLSASNSLAEWSKSDYGAGFRFINSSTLISLRDVWTKYAEALSKKDSARYRANFEVALKHSNTYKEAKYAGFGLVYG-GARAAAPLGMQTMAGTEL 214          
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: K5VZ92_AGABU (MYND-type domain-containing protein (Fragment) n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5VZ92_AGABU)

HSP 1 Score: 64.3 bits (155), Expect = 2.030e-7
Identity = 55/202 (27.23%), Postives = 85/202 (42.08%), Query Frame = 1
Query:    1 YRKGCTPPEYLLGGVPIDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGLRTLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLNRLRCMWYVYADTSIAQIKPKKQL 606
            Y  G TPP  L   +P +   A +LLLGC D RH L+T+ T                          H    R++ FT  D EPA +AR  LL    +DS +D           ++L  Y       ++ +Y++++D  T         +L+E +A  ++W  S  G+    A + TL+  R  W  Y +T +     +KQL
Sbjct:   14 YPIGNTPPVSLTDHLPPEGA-ATILLLGCGDPRHILYTITT-------------------------DHGIPTRSMDFTCCDWEPAIIARNALLFTFMYDSVED-----------DRLLQY-------WSIFYDLFLDKRTASLLSKQCKKLVEYAADFSTWDNSPYGNFLKFATQDTLDEARRHWKSYEETIVLSNAKQKQL 171          
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: A0A0C2X864_AMAMK (MYND-type domain-containing protein n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2X864_AMAMK)

HSP 1 Score: 63.5 bits (153), Expect = 3.610e-7
Identity = 57/202 (28.22%), Postives = 84/202 (41.58%), Query Frame = 1
Query:    1 YRKGCTPPEYLLGGVPIDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGLRTLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLNRLRCMWYVYADTSIAQIKPKKQL 606
            Y  G TP   L   +P +   AD+LLLGC DAR+ L+T++              G+ S              R L FT  D EPA LAR ++L  L              D   +    Y +K+   +N Y++ ++D  TL    +   +L+E S    SW+ S  G     +   TL+ +R  W +Y +T       KK L
Sbjct:   14 YAIGNTPAVCLTSDIPPEVP-ADILLLGCGDARNVLYTIYAD-----------PGIPS--------------RKLDFTCCDVEPAVLARNVMLYTLI------------ADMPVKDTSDYISKL---WNLYFHFFIDGRTLSMILSQCQRLVEVSVDIQSWNDSDYGKFLRFSTTHTLSEVRRHWMLYFETQKLSSTEKKSL 174          
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Match: A0A1V6YBH5_PENNA (MYND-type zinc finger protein samB n=1 Tax=Penicillium nalgiovense TaxID=60175 RepID=A0A1V6YBH5_PENNA)

HSP 1 Score: 62.8 bits (151), Expect = 6.340e-7
Identity = 68/287 (23.69%), Postives = 104/287 (36.24%), Query Frame = 1
Query:    1 YRKGCTPPEYLLGGVPIDARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGLRTLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAKIALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIAGRSTLNRLRCMWYVYADTSIAQIKPK--KQLDKERKTYHDRTVFPSKNASPILLTGEGPGITAPKAMEWGTEMTGIHRQYQSWGYLDPFPVLRGGARSDSKYYTKTNPAMVATD 855
            Y  G TP   L   +P   + AD+LLLGC D RH LFT+ T                        +Q     R L  T  D + A +AR ++LL L  D  D                   A     +N +Y+  +D+++L   Q    +LL  S S  +W +S  G +  I+   +L R+R MW  Y       +  +  K +D   +       F             G    AP  M+   ++  +++ Y ++G  +     R  A          NP  V  D
Sbjct:   14 YPIGNTPAVCLTQDLP-QKKNADLLLLGCGDVRHILFTIHT------------------------EQQARDPRLLDATCCDVDTAVIARNIVLLSLILDDVD------------------GANDQSIWNIFYHFRIDDSSLNLLQTQTTKLLSPSTSLPTWQQSQYGRVIRISDHISLERVRDMWRFYGKKREGDVLSRFTKHVDDGMRMSQQ---FQKWVIGEKTTVATGIRAAAPACMQATLDLPHLYKSYWAFGTTETDEAARSLA-------VNFNPMFVPKD 247          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10946.761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K075_9PHAE5.800e-14973.73DUF4470 domain-containing protein (Fragment) n=2 T... [more]
A0A6A6P7W4_9PEZI3.880e-1028.09MYND-type zinc finger protein samB n=1 Tax=Lineola... [more]
A0A1V6QPZ5_9EURO3.810e-924.03MYND-type zinc finger protein samB n=2 Tax=Penicil... [more]
A0A0G4PAV2_PENCA1.180e-824.11Str. FM013 n=1 Tax=Penicillium camemberti FM 013 T... [more]
A0A1M2V2L4_TRAPU3.710e-826.91MYND-type domain-containing protein n=1 Tax=Tramet... [more]
A0A8A1MC11_AJECA1.430e-723.63Dihydrodipicolinate synthetase n=1 Tax=Ajellomyces... [more]
A0A423WM13_9PEZI1.550e-729.27MYND-type zinc finger protein samB n=1 Tax=Valsa s... [more]
K5VZ92_AGABU2.030e-727.23MYND-type domain-containing protein (Fragment) n=3... [more]
A0A0C2X864_AMAMK3.610e-728.22MYND-type domain-containing protein n=1 Tax=Amanit... [more]
A0A1V6YBH5_PENNA6.340e-723.69MYND-type zinc finger protein samB n=1 Tax=Penicil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10946contigE-fasciculatus_F_contig10946:42..4576 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1133
Cds size819
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927595.1967678-UTR-E-fasciculatus_F_contig10946:41..1101622927595.1967678-UTR-E-fasciculatus_F_contig10946:41..110Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10946 42..110 +
1695995612.2488294-UTR-E-fasciculatus_F_contig10946:41..1101695995612.2488294-UTR-E-fasciculatus_F_contig10946:41..110Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10946 42..110 +
1622927595.321047-UTR-E-fasciculatus_F_contig10946:4068..40881622927595.321047-UTR-E-fasciculatus_F_contig10946:4068..4088Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10946 4069..4088 +
1695995612.3078396-UTR-E-fasciculatus_F_contig10946:4068..40881695995612.3078396-UTR-E-fasciculatus_F_contig10946:4068..4088Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10946 4069..4088 +
1622927595.339378-UTR-E-fasciculatus_F_contig10946:4351..45761622927595.339378-UTR-E-fasciculatus_F_contig10946:4351..4576Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10946 4352..4576 +
1695995612.3196273-UTR-E-fasciculatus_F_contig10946:4351..45761695995612.3196273-UTR-E-fasciculatus_F_contig10946:4351..4576Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10946 4352..4576 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927595.213871-CDS-E-fasciculatus_F_contig10946:110..3531622927595.213871-CDS-E-fasciculatus_F_contig10946:110..353Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 111..353 +
1695995612.2571726-CDS-E-fasciculatus_F_contig10946:110..3531695995612.2571726-CDS-E-fasciculatus_F_contig10946:110..353Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 111..353 +
1622927595.226321-CDS-E-fasciculatus_F_contig10946:1333..14561622927595.226321-CDS-E-fasciculatus_F_contig10946:1333..1456Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 1334..1456 +
1695995612.2649355-CDS-E-fasciculatus_F_contig10946:1333..14561695995612.2649355-CDS-E-fasciculatus_F_contig10946:1333..1456Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 1334..1456 +
1622927595.2405303-CDS-E-fasciculatus_F_contig10946:2248..23491622927595.2405303-CDS-E-fasciculatus_F_contig10946:2248..2349Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 2249..2349 +
1695995612.2725735-CDS-E-fasciculatus_F_contig10946:2248..23491695995612.2725735-CDS-E-fasciculatus_F_contig10946:2248..2349Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 2249..2349 +
1622927595.2599378-CDS-E-fasciculatus_F_contig10946:2889..29731622927595.2599378-CDS-E-fasciculatus_F_contig10946:2889..2973Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 2890..2973 +
1695995612.2804534-CDS-E-fasciculatus_F_contig10946:2889..29731695995612.2804534-CDS-E-fasciculatus_F_contig10946:2889..2973Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 2890..2973 +
1622927595.2784553-CDS-E-fasciculatus_F_contig10946:3249..34351622927595.2784553-CDS-E-fasciculatus_F_contig10946:3249..3435Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 3250..3435 +
1695995612.2885983-CDS-E-fasciculatus_F_contig10946:3249..34351695995612.2885983-CDS-E-fasciculatus_F_contig10946:3249..3435Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 3250..3435 +
1622927595.303577-CDS-E-fasciculatus_F_contig10946:3986..40681622927595.303577-CDS-E-fasciculatus_F_contig10946:3986..4068Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 3987..4068 +
1695995612.298202-CDS-E-fasciculatus_F_contig10946:3986..40681695995612.298202-CDS-E-fasciculatus_F_contig10946:3986..4068Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10946 3987..4068 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10946.761.1prot_E-fasciculatus_F_contig10946.761.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10946 111..4068 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10946.761.1

>prot_E-fasciculatus_F_contig10946.761.1 ID=prot_E-fasciculatus_F_contig10946.761.1|Name=mRNA_E-fasciculatus_F_contig10946.761.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=273bp
MLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQHPDGLR
TLRFTMNDREPACLARVLLLLQLFFDSHDDLLRACSPDASPEQLDAYSAK
IALCFNAYYNIYVDNATLQATQAAANQLLEASASPASWSRSLVGSIAHIA
GRSTLNRLRCMWYVYADTSIAQIKPKKQLDKERKTYHDRTVFPSKNASPI
LLTGEGPGITAPKAMEWGTEMTGIHRQYQSWGYLDPFPVLRGGARSDSKY
YTKTNPAMVATDHEELDYQARR*
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mRNA from alignment at E-fasciculatus_F_contig10946:42..4576+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10946.761.1 ID=mRNA_E-fasciculatus_F_contig10946.761.1|Name=mRNA_E-fasciculatus_F_contig10946.761.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4535bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10946:42..4576+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TACCGAAAAGGCTGTACTCCCCCCGAGTACCTCCTGGGCGGCGTCCCCAT CGACGCCCGGCGCGCGGACATGCTCCTGCTCGGCTGCTCCGACGCCCGCC ACGCGCTCTTCACCCTCTGGACCTACGGCTCCGAGTGCAGCCGGGAGCGG GGGCGCTGGGACGGACTCACTTCCGAGGAGCGGCGCCAGCAGAACCAGCA GCACCCCGACGGCCTGCGGACGCTGCGCTTCACCATGAACGACCGGGAGC CGGCCTGCCTGGCCCGCGTGCTGCTGCTGCTCCAGCTCTTCTTCGACAGC CACGATGATCTGGTGAGAAGCTGGGGGGCGGGCGGGGCCGTGGTGGTTGG GAGGGGGAGGATGTCACGGTGAAGAACGTCGTGTGACGATGAAGTTAGAG TTGTTTTACCGTGTGACGGTGTGGCCTGGGCCATTCCCAGAACTGACAAG GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCTCCTTCGACGCGA GGAATGACACTTAGTAGTTTTTGCCCTTCTTCGGTCCGCTTGTTGTTCTG TTTCAGTGCTTGAAAAGCTGATGCAACGTTGCGTACAGTAGCCTACCTAC TACCTCAGCGCCTCCTTTGGTATTGACTATTGAATCCTCGGCAACCGTTC CTGTGAACACGTATGCATGCACCCAGTTTTTGATGTGTTGAGGGAGTTTC GGAGGNNNNNNNNNNGCACCCAGTTTTTGATGTTGTGGGGGAGGTTCGGG GGGGGGGGGGGACTCGCGGCACGGGTCGAGGTCGGGGAATAAAAAAAAAA TCTTCCATGTCCCCAAACTCCATGTAGATGTGGAGGCACCATGACTCGCT GGGGGAGCAATCGTTGTACCTGTTCGTGCGTGGGAATGATTTCGGCTCAC TCTGCTTATCGTTCAGGTCGCTGTTTCGGCGGCCAAAGTTGAAACCGGAG ACGGGAAAATTCTACATGTATTCCTTGATGGAGGAAATCCTTGATGAGGG CAAACAGCAAACATGCCCCCTCTCTCCTTGGCCCTTGCGCCGCGCTATAC TCCAGCCCTACTCGTTCGTGATTTCACACACCCACGCGCTTGTTTCGTGT CTACCGCAGCTGCCGACCTCTCATGTATCCGTCTACGTATCTCCCTCCGT TTGTTTTGTTTTACGTTTGCCTCTCTTGTGTTTTTTGGTTTGGATCAGCT GAAGGCACCAACGACTTATGTGTCCGTCCGTCTATCCCCCTCCGCTTGTT TTGGTTACGGTTTGCCTGTTTGTGTTTTTTTGTGTACATCAGCTGAGGGC GTGCTCGCCGGACGCTTCGCCCGAGCAACTAGACGCTTACTCGGCGAAAA TCGCGCTGTGCTTCAACGCCTACTACAACATCTACGTCGACAACGCCACG CTTCAGGCCACCCAGGTGCCCTATGTAGCTTTGCTACTTGCCGGCGACGC TATTATGCTAACGCTATTATGCTTGTAGGAGTCATGGACAAATGGCGTAC GTGTCGATTTAGATCGGTAGAAATGACAGGTTTGACTTTTATGCTCTTAT GGCCGTGAGCTGGCTTGTTGCCCCGAGTTTGCCAACGGGTGATACGGAAG GGATGACAAACATAAGGATCCGTACTGTAGTCCAAACCTTTGCCGGTTAT GTTCCGACTGTTGGTGTGTCTGGACTGTGCCCGGATATCGCAGACGTCTA GACTACATACCCGTGTTTTTCCGACTTTTGCGTCAATTATCGTCGCAAAC CGATGCCTGTCGTGGCTGCGGGTCGGCGATGTACGTTAACGAGAGGGCTG GTCGTTGTTGAGGATGTTTTTGGCAGAGGCACTAGCGGATGAGTTTGTTG TTCAGCATTCTGGCACCGTCAGATGCCTCGCGCTTGCGACAGTAGGGCAG TGGTAACGTATGGTAGTTTGACACCGCTTGTTTCTGTATTTTGGCGAAAC GTACGGCCGTGTCTCCAAACATCCGAAAGTGCGCCAGGTTACAGACTCTT CTGTTGTTGCACGCCGACCGTTGTCTCTTGGCCGATCTGCGAGGACATGG AGAGCATCACGCCATCCTAGATGTTGTGATCATCGTGGTGTGCCCTCTGC CCCTCTGCCTCATTCCTTGTCGGCTGCCGCCGTTGAGTTGATGTTGCTGT TAACCCTGCCGGTCGTCTTTTCCTTGCCGCGTCACCTGTTTGGCGGCGAG TGCGCAGGCCGCAGCCAACCAGCTCCTGGAAGCGTCAGCGTCGCCCGCCT CTTGGAGCAGGTCTCTCGTCGGATCTATCGCCCACATTGCTGGCCGGAGC ACTCTAAAGTGAGCGAGTGAAGGGGTTAGGTTGGTCACATGGGCAAAGAT CACACTCATCCACCCGAGACAGATATGCACCTTCAGGTTTTGGGCGCTGT TGACGCTTCTGCCATCCTTGCCGTAGGGAATACTTCGGGTTGATGGGCAC GGAGGAGGGGGGGCGGGGGGCGGGGGCTCGGTGCTGGAGTCTGACAGTAA CCCTGTGCACAGCTTGTGTCGGGGGTGCGAGGGTCTTTGCACGTGTTTTT GACGCTGGTACTCCTCCTTAGTTGTAGTATGATTTGCTTGACTCTCCTTC AGCGTGAAGCGACGGTTTGTTCCTGTTGGCGCTTGTTTTTGTTCTTTTCA AATTCCCTGCGTCATGTTTTTGGGGACTTGTTGTTCTATCGTGGGAATGA GGTGTACGTGAATATGCTGTAGCACGCGTGCTGCGCTCGTTTCGGGTCCG CCGGACGTTGGTCCTAGCACTACGGTCTCACCCCCAATATGCCCTCATCG CGGTTCTGCGCCTCCCCCCCTCTTTCCTCTTCCGCTTCACCTCTGCAGCC GCCTGCGCTGCATGTGGTACGTGTATGCAGATACGAGCATTGCTCAGATC AAGCCGAAGAAGCAATTGGACAAGGAGCGCAAGTGAGTGCACGGCTCTCG TCTTGCCTTTGTTTTGTCTTGTCTTGTCTTGTCTTTGTCTTGTTTCGCTT GCAGTTTTTAAGGGAAGACAGCTAGCGATCGAGAGAGCGACTGTGCGAGC GACAGCCGCCTCTTATTTAAAAATACATGGTTGCTCTTCTTTTTTTTGTC CTGGGTGTGTTCGCAGAAGGCGTAGTCCAGGGGCGCCAGAGAATGAATAG GACAAACATTCATCTAAAAGCTTAATGTCTTGTATTTGTTTGCTTTGTTG TCATGCAGGACCTACCACGATCGAACGGTGTTCCCTTCGAAGAACGCCTC TCCCATCCTGCTCACCGGCGAGGGCCCCGGCATCACTGCCCCCAAGGCGA TGGAATGGGGCACGGAGATGACGGGCATCCACCGCCAGTACCAGTCCTGG GGATACCTCGACCCCTTCCCGGTGCTCCGCGGCGGCGCTAGAAGGTAAGC ACACACACACACACACACACACACACACACGGGAGCTAAGGGGGGGGGAG CAAGAGACACGGCGAACGCTGGCTCTCCCGGCAGATGGCGCAAGGTCCCT CGCACCAGGAGGCCGGGCCGCATAGGCATGAATTTGCCCACCAAAAGCTT TTGTTGTGATTGCTGGGCTTGCGCGCGCTCGCGCGCGCGTGTTTGTTCTC TGGAGATGTCTTGCGGTACTCGATGCGCGCGACTACTGCTGTCTCCCGTT GACCCAGAGCTTATGTACGTGTGTGGTGTGCGGGCACATGCCGACGGACG CCCATATTTTCTTTTCGGTCCGCCTGCAATCACAGGCGAAGCAGAAGGAT GCACCGCCTCGAGACGATGCGCTTTCCCTTCACATGACTGCATGTCCTTT TTGTGTATTTCCCCGTTGTTTGTGTTGTTGTGGGGGGGTCCCGTCCGTTC GTGGTTTGTCCGGCATGACTCGTTTCGTCACACGATGATGATGATGCTCC GACGCGACGGCACGACCACGCCTGTCTGGCGCGGCTATCGAACAGCGACA GCAAGTACTACACCAAAACCAACCCCGCCATGGTCGCGACGGATCACGAG GAGCTAGACTACCAGGCAAGACGATAGCGAGCATAAGAAGTTGTGCGGTT CGGGCGTGTGGGGTAGTAGTGTACGGTGATAGCCGCGTAAGACTTGTTCT GTCGGCCTAGTAAGCCGCTGCTGCTACCGAAGAGCCTAGCTGTCGCTTGA GGAATGCTTGCTTTCGCCCGTAGAAATATTCCCCTTCGAAGACGAATGAT CCTGATGAACCGTTCGCCTTAGAGCAGCAGCAACAAGGAGCAGCGCACAC CACCACTTCAACCTGAGCATATGTTCCCCCCCGCCATCACCTGCACCTAA CAACCAACAGGTGCACCACAATTGCAACCCGTTGAGCGCCTTCCACCACG ACGACGTCTGGCTCCCCTTCAAGACGTGGGAAGACGAGAATACGCAAGAA CGCGGGCGATACAACACGACTGGCACTAGCGGGTGCAAGCCCCTGTACGC GGGGCCCCCGAGGGTTACATGGGTGGACCTTACCGTCACGGAGACCCCCT TGGAATTTGAAGACGAGCCGGAAGAGGCTAAGCGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10946:42..4576+

>mRNA_E-fasciculatus_F_contig10946.761.1 ID=mRNA_E-fasciculatus_F_contig10946.761.1|Name=mRNA_E-fasciculatus_F_contig10946.761.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1638bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10946:42..4576+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTCCTGCTCGGCTGCTCCGACGCCCGCCACGCGCTCTTCACCCTCTG
GACCTACGGCTCCGAGTGCAGCCGGGAGCGGGGGCGCTGGGACGGACTCA
CTTCCGAGGAGCGGCGCCAGCAGAACCAGCAGCACCCCGACGGCCTGCGG
ACGCTGCGCTTCACCATGAACGACCGGGAGCCGGCCTGCCTGGCCCGCGT
GCTGCTGCTGCTCCAGCTCTTCTTCGACAGCCACGATGATCTGATGCTCC
TGCTCGGCTGCTCCGACGCCCGCCACGCGCTCTTCACCCTCTGGACCTAC
GGCTCCGAGTGCAGCCGGGAGCGGGGGCGCTGGGACGGACTCACTTCCGA
GGAGCGGCGCCAGCAGAACCAGCAGCACCCCGACGGCCTGCGGACGCTGC
GCTTCACCATGAACGACCGGGAGCCGGCCTGCCTGGCCCGCGTGCTGCTG
CTGCTCCAGCTCTTCTTCGACAGCCACGATGATCTGCTGAGGGCGTGCTC
GCCGGACGCTTCGCCCGAGCAACTAGACGCTTACTCGGCGAAAATCGCGC
TGTGCTTCAACGCCTACTACAACATCTACGTCGACAACGCCACGCTTCAG
GCCACCCAGCTGAGGGCGTGCTCGCCGGACGCTTCGCCCGAGCAACTAGA
CGCTTACTCGGCGAAAATCGCGCTGTGCTTCAACGCCTACTACAACATCT
ACGTCGACAACGCCACGCTTCAGGCCACCCAGGCCGCAGCCAACCAGCTC
CTGGAAGCGTCAGCGTCGCCCGCCTCTTGGAGCAGGTCTCTCGTCGGATC
TATCGCCCACATTGCTGGCCGGAGCACTCTAAAGCCGCAGCCAACCAGCT
CCTGGAAGCGTCAGCGTCGCCCGCCTCTTGGAGCAGGTCTCTCGTCGGAT
CTATCGCCCACATTGCTGGCCGGAGCACTCTAAACCGCCTGCGCTGCATG
TGGTACGTGTATGCAGATACGAGCATTGCTCAGATCAAGCCGAAGAAGCA
ATTGGACAAGGAGCGCAACCGCCTGCGCTGCATGTGGTACGTGTATGCAG
ATACGAGCATTGCTCAGATCAAGCCGAAGAAGCAATTGGACAAGGAGCGC
AAGACCTACCACGATCGAACGGTGTTCCCTTCGAAGAACGCCTCTCCCAT
CCTGCTCACCGGCGAGGGCCCCGGCATCACTGCCCCCAAGGCGATGGAAT
GGGGCACGGAGATGACGGGCATCCACCGCCAGTACCAGTCCTGGGGATAC
CTCGACCCCTTCCCGGTGCTCCGCGGCGGCGCTAGAAGGACCTACCACGA
TCGAACGGTGTTCCCTTCGAAGAACGCCTCTCCCATCCTGCTCACCGGCG
AGGGCCCCGGCATCACTGCCCCCAAGGCGATGGAATGGGGCACGGAGATG
ACGGGCATCCACCGCCAGTACCAGTCCTGGGGATACCTCGACCCCTTCCC
GGTGCTCCGCGGCGGCGCTAGAAGCGACAGCAAGTACTACACCAAAACCA
ACCCCGCCATGGTCGCGACGGATCACGAGGAGCTAGACTACCAGGCAAGA
CGATAGCGACAGCAAGTACTACACCAAAACCAACCCCGCCATGGTCGCGA
CGGATCACGAGGAGCTAGACTACCAGGCAAGACGATAG
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