mRNA_E-fasciculatus_F_contig10944.760.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: A0A6H5JJT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJT5_9PHAE) HSP 1 Score: 315 bits (807), Expect = 5.890e-105 Identity = 163/169 (96.45%), Postives = 163/169 (96.45%), Query Frame = 1
Query: 1 EPDLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSNLYSTVGVHPTRCSEFFGG---GDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSMG 498
EPDL AVLERASAAGVEKMIVTAGTLEESREALALAKSH NLYSTVGVHPTRCSEFFGG GDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFA LVRRNRDRVSGGVVHSFTGTREEAEELVSMG
Sbjct: 133 EPDLHAVLERASAAGVEKMIVTAGTLEESREALALAKSHPNLYSTVGVHPTRCSEFFGGDGGGDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFARLVRRNRDRVSGGVVHSFTGTREEAEELVSMG 301
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: D8LP26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP26_ECTSI) HSP 1 Score: 258 bits (659), Expect = 3.350e-84 Identity = 142/169 (84.02%), Postives = 143/169 (84.62%), Query Frame = 1
Query: 1 EPDLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSNLYSTVGVHPTRCSEFFGG---GDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSMG 498
EPDLDAVLERASAAGVEKMIVTAGTLEESREALALAKS+ NLYSTVGVHPTRCSEFFGG GDGPEAHVAALAAILEEGKAAGK AKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSMG
Sbjct: 32 EPDLDAVLERASAAGVEKMIVTAGTLEESREALALAKSYPNLYSTVGVHPTRCSEFFGGDGGGDGPEAHVAALAAILEEGKAAGK----------------------AKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSMG 178
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: A0A6P8DJJ0_PUNGR (putative deoxyribonuclease TATDN1 isoform X1 n=5 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DJJ0_PUNGR) HSP 1 Score: 196 bits (498), Expect = 2.220e-59 Identity = 102/164 (62.20%), Postives = 118/164 (71.95%), Query Frame = 1
Query: 4 PDLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSNLYSTVGVHPTRCSEFFGGGDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSM 495
PD+ VL RA AGVE++IVT G+LEESREALA+A++ LY TVGVHPTRC EF GD PE H AL + +EGK GKVVAVGECGLDYDRLHFC E Q K FE QFELA + LP+F H RA EDF +V RN+DR GV HSFTGT EE ++L+S
Sbjct: 30 PDIVTVLNRAWTAGVERIIVTGGSLEESREALAIAETDGRLYCTVGVHPTRCKEFEDSGD-PENHFQALLLLAKEGKRKGKVVAVGECGLDYDRLHFCPAEIQKKYFEKQFELAYATKLPMFLHMRAAAEDFCEIVERNKDRFCAGVAHSFTGTSEERDKLLSF 192
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: A0A075M388_PHYCP (TatD related DNase n=1 Tax=Phytophthora capsici TaxID=4784 RepID=A0A075M388_PHYCP) HSP 1 Score: 192 bits (488), Expect = 4.430e-58 Identity = 101/171 (59.06%), Postives = 122/171 (71.35%), Query Frame = 1
Query: 1 EPDLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSN-----LYSTVGVHPTRCSEFFGGGDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSMG 498
E D A+L RA A GV+K+IVT G LEESR+AL LA+ H L+STVGVHPTRCSEF G+ P+A+ A L AI E+GK+ GKVVAVGECGLDYDRL FC K Q K FE QFELAE++ LP+F H+R DF ++ +NR R S GVVHSFTG +EE +LV +G
Sbjct: 28 ESDFTAILARAKAFGVDKIIVTGGNLEESRKALHLAQQHEGDGFPQLFSTVGVHPTRCSEFAADGNNPDAYFAQLLAICEQGKSEGKVVAVGECGLDYDRLEFCDKATQLKYFEKQFELAEQTKLPLFLHNRNTGGDFYEMISKNRSRFSNGVVHSFTGEKEEMLKLVELG 198
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: A0A2R6WWI7_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WWI7_MARPO) HSP 1 Score: 188 bits (478), Expect = 2.160e-56 Identity = 99/163 (60.74%), Postives = 117/163 (71.78%), Query Frame = 1
Query: 7 DLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSNLYSTVGVHPTRCSEFFGGGDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSM 495
DL VL+RA AGVE++IVT G+LEESREALALA + LY TVGVHPTRCSE+ GD PE H L A+ +EG A GKVVAVGECGLDYDRL FC Q + FE QF+LAE +GLP+F H RA EDF+ +V RNR R G VHSFTGT +E E +++
Sbjct: 31 DLSIVLKRAWDAGVERIIVTGGSLEESREALALADTDGRLYCTVGVHPTRCSEWEESGD-PEKHYQELLALAKEGAAKGKVVAVGECGLDYDRLQFCPANVQQRYFEKQFDLAEATGLPMFLHMRAAAEDFSTIVERNRTRFRAGCVHSFTGTSDELERMLAF 192
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: G4Z2K2_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z2K2_PHYSP) HSP 1 Score: 187 bits (476), Expect = 2.930e-56 Identity = 99/171 (57.89%), Postives = 121/171 (70.76%), Query Frame = 1
Query: 1 EPDLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSN-----LYSTVGVHPTRCSEFFGGGDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSMG 498
E DL A L RA A GV+K+IVT G LEES+ AL LAKS+ L+STVGVHPTRCSEF G P+A+ A L A+ E+G+ GKVVA+GECGLDYDRL FC KE Q K FE QF+LAER+ LP+F H+R DF ++ ++R R S GVVHSFTG +EE +LV +G
Sbjct: 28 ESDLTAALARAKAFGVDKIIVTGGNLEESKAALQLAKSNEGDGLPQLFSTVGVHPTRCSEFEADGRDPDAYFAELLAVCEQGQKEGKVVAIGECGLDYDRLEFCDKETQLKYFEKQFQLAERTKLPLFLHNRNTDGDFYAMIAKHRSRFSNGVVHSFTGGKEEMLKLVELG 198
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: A0A6P6SQA9_COFAR (putative deoxyribonuclease TATDN1 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6SQA9_COFAR) HSP 1 Score: 188 bits (477), Expect = 3.400e-56 Identity = 94/163 (57.67%), Postives = 120/163 (73.62%), Query Frame = 1
Query: 7 DLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSNLYSTVGVHPTRCSEFFGGGDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSM 495
D+ AVL RA +AGV+++IVT G+LEES+EALA+A++ + L+ TVGVHPTRC EF GD PE H +L ++ +EG GKVVA+GECGLDYDRLHFC E Q K FE QFELA LP+F H RA EDF ++ RN++R GGV HSFTG+ EE ++L+S
Sbjct: 31 DISAVLSRAWSAGVDRIIVTGGSLEESKEALAIAETDARLFCTVGVHPTRCKEFDESGD-PEKHFQSLLSLAKEGVEKGKVVAIGECGLDYDRLHFCPSEIQQKYFEKQFELAHAMRLPMFLHMRAAAEDFCTILERNKERFCGGVAHSFTGSAEERDKLLSF 192
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: UPI000A2A9A43 (putative deoxyribonuclease TATDN1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9A43) HSP 1 Score: 187 bits (475), Expect = 3.930e-56 Identity = 93/164 (56.71%), Postives = 117/164 (71.34%), Query Frame = 1
Query: 7 DLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSNLYSTVGVHPTRCSEFFGGGDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNRDRVSGGVVHSFTGTREEAEELVSMG 498
D VLERAS G++KMI+T G LEES +AL LAK+H +L+ TVG HPTRC EF G P+ ++ L ++ +E K GKVVA+GECGLD+DRLHFC KE Q K FE QFEL E LPVFFHSR+ +DF +++RNRD GGV H FTGT+EEA++ + G
Sbjct: 37 DFSDVLERASKIGMKKMIITGGNLEESAKALELAKTHDSLHCTVGCHPTRCGEFESEGANPDEYLNKLISLAQENK--GKVVALGECGLDFDRLHFCSKELQLKYFEKQFELTEAVKLPVFFHSRSSHQDFIDIIKRNRDXFVGGVAHCFTGTKEEAKDYIDQG 198
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: A0A8J4D071_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D071_9CHLO) HSP 1 Score: 187 bits (474), Expect = 5.550e-56 Identity = 95/165 (57.58%), Postives = 122/165 (73.94%), Query Frame = 1
Query: 4 PDLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSNLYSTVGVHPTRCSEFFGGGDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNR-DRVSGGVVHSFTGTREEAEELVSM 495
PDL +VL+RA AG+E++I+TAG+L+E+++AL LAK+ L+ TVG HPTRC EF G EA++ L A+L EG+AAGKVVAVGECGLDYDRLHFC E Q K FE QF+LA SGLP+F H RA +DF +V+R+ D GGVVHSF GT +EA+ ++ M
Sbjct: 104 PDLMSVLDRAWVAGLERLIITAGSLKEAQKALELAKTDDRLFCTVGCHPTRCGEFEAHSGGAEAYLQELLAVLREGQAAGKVVAVGECGLDYDRLHFCDAETQKKYFEAQFQLARESGLPMFLHLRAAADDFLEIVQRHAADFSRGGVVHSFDGTADEAKRILEM 268
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Match: A0A8J4B3E0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B3E0_9CHLO) HSP 1 Score: 189 bits (479), Expect = 5.570e-56 Identity = 96/165 (58.18%), Postives = 122/165 (73.94%), Query Frame = 1
Query: 4 PDLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSNLYSTVGVHPTRCSEFFGGGDGPEAHVAALAAILEEGKAAGKVVAVGECGLDYDRLHFCGKEDQAKGFELQFELAERSGLPVFFHSRACREDFAGLVRRNR-DRVSGGVVHSFTGTREEAEELVSM 495
PDL +VL RA AAG++++I+TAG+L E+R+ALALAK+ L+ TVG HPTRC EF G EA++ L A+L EG+A+GKVVAVGECGLDYDRLHFC E Q K FE QFELA SGLP+F H RA +DF +V+R+ D GGVVHSF GT +EA+ ++ +
Sbjct: 85 PDLTSVLNRAWAAGLQRLIITAGSLTEARKALALAKTDDRLFCTVGCHPTRCGEFKSHAGGAEAYLQELLAVLREGQASGKVVAVGECGLDYDRLHFCDAETQKKYFEAQFELARESGLPMFLHLRAAADDFLEIVQRHAADFPRGGVVHSFDGTTDEAKRILEL 249 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10944.760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10944.760.1 >prot_E-fasciculatus_F_contig10944.760.1 ID=prot_E-fasciculatus_F_contig10944.760.1|Name=mRNA_E-fasciculatus_F_contig10944.760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=166bp EPDLDAVLERASAAGVEKMIVTAGTLEESREALALAKSHSNLYSTVGVHPback to top mRNA from alignment at E-fasciculatus_F_contig10944:409..2605- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10944.760.1 ID=mRNA_E-fasciculatus_F_contig10944.760.1|Name=mRNA_E-fasciculatus_F_contig10944.760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2197bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10944:409..2605- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10944:409..2605- >mRNA_E-fasciculatus_F_contig10944.760.1 ID=mRNA_E-fasciculatus_F_contig10944.760.1|Name=mRNA_E-fasciculatus_F_contig10944.760.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=996bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10944:409..2605- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |