mRNA_E-fasciculatus_F_contig1094.758.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1094.758.1 vs. uniprot
Match: D7FYY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY7_ECTSI) HSP 1 Score: 322 bits (824), Expect = 2.540e-104 Identity = 192/219 (87.67%), Postives = 195/219 (89.04%), Query Frame = 1
Query: 1 MRSAIYALHLGVCLLAGQACAFVCSPSARAISSVGPKGVPSSSPFASRARGACVVMQATSNVESSVSLYKKLVGAKRWETDEGIEKRAEGTFAEMCKVYGEDNAVQMVKNSPSCLGYDGSVFQATFXXXXXXXXXXXXXXXXXXXXNLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVKPLGPVLLFGLAFCLAIPLVEMGTGISREQILSAIISGGN 657
MRSAIYALHLGVCLLAGQACAFVCSPS RAI+SVGPKG ASRA A +VMQATSNVESSVS YKKLVGAKRWETDEGIEKRA GTFA+MCKVYGEDNAVQMVKNSPSCLGYDGSVFQATF XXXXXXXXXXXX NLLAVRPTGFGGAANAKSDTMQMSYVIAATR PLGPVLLFGLAFCLAIPLVEMGTGISREQILSAIISGGN
Sbjct: 1 MRSAIYALHLGVCLLAGQACAFVCSPSGRAIASVGPKG-------ASRAP-AGIVMQATSNVESSVSRYKKLVGAKRWETDEGIEKRAAGTFADMCKVYGEDNAVQMVKNSPSCLGYDGSVFQATFEAFTEXXXXXXXXXXXXRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATR---PLGPVLLFGLAFCLAIPLVEMGTGISREQILSAIISGGN 208
BLAST of mRNA_E-fasciculatus_F_contig1094.758.1 vs. uniprot
Match: A0A6H5KAE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAE4_9PHAE) HSP 1 Score: 197 bits (502), Expect = 2.070e-57 Identity = 108/126 (85.71%), Postives = 111/126 (88.10%), Query Frame = 1
Query: 1 MRSAIYALHLGVCLLAGQACAFVCSPSARAISSVGPKGVPSSSPFASRARGACVVMQATSNVESSVSLYKKLVGAKRWETDEGIEKRAEGTFAEMCKVYGEDNAVQMVKNSPSCLGYDGSVFQATF 378
MRSAIYALHLGVCLLAGQ CAFVC PS RAI+SVGPKG ASRA A VVMQATSNVESSV+ YKKLVGAKRWETDEGIEKRA GTFAEMCKVYGEDNAVQMVKNSPSCLGYDGSVF+ATF
Sbjct: 1 MRSAIYALHLGVCLLAGQTCAFVCPPSGRAIASVGPKG-------ASRAP-AGVVMQATSNVESSVARYKKLVGAKRWETDEGIEKRAAGTFAEMCKVYGEDNAVQMVKNSPSCLGYDGSVFRATF 118
BLAST of mRNA_E-fasciculatus_F_contig1094.758.1 vs. uniprot
Match: A0A7R9UE42_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE42_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.070e-17 Identity = 78/149 (52.35%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 190 SSVSLYKKLVGAKRWETDEGIEK-RAEGTFAEMCKVYGEDNAVQMVKNSPSCLGYDGSVFQATFXXXXXXXXXXXXXXXXXXXXNLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVKPLGPVLLFGLAFCLAIPLVEMGTGISREQIL 633
++V ++KK A + T +E+ + + T+ + KVYG+DNA++MVK P CL +D S FQ XXXXXXXXXXXXXXXXXXXX GGA AK DT MSYVIA TR PLGPVLL GL L++PLVE TGI R ++L
Sbjct: 31 AAVEVFKKRYAAPKPGTRYDVEEAKLKSTYKSIAKVYGDDNALEMVKAVPGCLAFDPSNFQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGATGAKDDTFYMSYVIAFTR---PLGPVLLAGLIAALSVPLVEGLTGIPRAELL 176
BLAST of mRNA_E-fasciculatus_F_contig1094.758.1 vs. uniprot
Match: B7FNV7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNV7_PHATC) HSP 1 Score: 76.6 bits (187), Expect = 1.700e-12 Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 1
Query: 253 EKRAEGTFAEMCKVYGEDNAVQMVKNSPSCLGYDGSVFQATFXXXXXXXXXXXXXXXXXXXXNLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVKPLGPVLLFGLAFCLAIPLVEMGTGISREQILSAII 645
EK TF E+ ++YGEDNA+QMVK+ L + + F + LLA+ P+G GGA + TMQ SY++ TR P GP LL+GL F L P +E TGI + +++ +
Sbjct: 59 EKDLRSTFKELARLYGEDNALQMVKDLTIVLAFKRNYFAPSLEAFSEVFGEEESKAMVQQNPGLLALPPSGAGGADSVTDQTMQFSYLVGYTR---PFGPFLLYGLLFLLFDPFLEYLTGIPIKTTITSAL 186
BLAST of mRNA_E-fasciculatus_F_contig1094.758.1 vs. uniprot
Match: A0A7S2MUE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUE2_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 3.310e-10 Identity = 50/143 (34.97%), Postives = 68/143 (47.55%), Query Frame = 1
Query: 187 ESSVSLYKKLVGAKRWETDEGIEKRAEGTFAEMCKVYGEDNAVQMVKNSPSCLGYDGSVFQATFXXXXXXXXXXXXXXXXXXXXNLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVKPLGPVLLFGLAFCLAIPLVEMGTGI 615
E SV G ++ DE ++ TF EM ++YGE A++M KN P+ L ++ S F + LLA+ P AA A TMQ SY++AATR P GPVLL G+ L +P +E TGI
Sbjct: 83 EISVGKGGSASGRTLYDIDEAQQR---ATFNEMARLYGEMEALEMTKNLPAVLAFNKSYFAESLANFSETFGEDDAKAMVQRNPGLLAIPPAN---AAKADGQTMQFSYIVAATR---PAGPVLLPGVLTLLCVPAIEAVTGI 216
BLAST of mRNA_E-fasciculatus_F_contig1094.758.1 vs. uniprot
Match: B5YMT8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMT8_THAPS) HSP 1 Score: 64.3 bits (155), Expect = 5.340e-8 Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 1
Query: 274 FAEMCKVYGEDNAVQMVKNSPSCLGYDGSVFQATFXXXXXXXXXXXXXXXXXXXXNLLAVRPTGFGGAANAKSDTMQMSYVIAATRQVKPLGPVLLFGLAFCLAIPLVEMGTGISREQILSAI 642
F + +YGE+NA++MVK P L ++ F + LL+V+P AA+A TMQMSYV+ TR + GPVL+ GL LA+P +E G+ + ++LS++
Sbjct: 104 FNTIVTLYGEENALKMVKIQPGVLAFNKDNFAPSLDAFGETFGLEEAKDMVIRNPGLLSVKPVI---AASADDLTMQMSYVVDFTRPIGAAGPVLILGL---LAVPALESALGVGKGELLSSL 220 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1094.758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1094.758.1 >prot_E-fasciculatus_F_contig1094.758.1 ID=prot_E-fasciculatus_F_contig1094.758.1|Name=mRNA_E-fasciculatus_F_contig1094.758.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=220bp MRSAIYALHLGVCLLAGQACAFVCSPSARAISSVGPKGVPSSSPFASRARback to top mRNA from alignment at E-fasciculatus_F_contig1094:10897..16012+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1094.758.1 ID=mRNA_E-fasciculatus_F_contig1094.758.1|Name=mRNA_E-fasciculatus_F_contig1094.758.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5116bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1094:10897..16012+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1094:10897..16012+ >mRNA_E-fasciculatus_F_contig1094.758.1 ID=mRNA_E-fasciculatus_F_contig1094.758.1|Name=mRNA_E-fasciculatus_F_contig1094.758.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1320bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1094:10897..16012+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |