mRNA_E-fasciculatus_F_contig1094.757.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1094.757.1
Unique NamemRNA_E-fasciculatus_F_contig1094.757.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: D7FYY1_ECTSI (Protein serine/threonine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY1_ECTSI)

HSP 1 Score: 794 bits (2051), Expect = 1.190e-275
Identity = 472/733 (64.39%), Postives = 535/733 (72.99%), Query Frame = 1
Query:    1 MLKRIVIGRDQAVPAGTAYSNTRSGVGTGARALPSRTTSVLGAVASVAAGVAKSHLLPSAITTTAKLNGGPLLGARPAIKVATATETLAAPVPAPVLSLTSSTPAKPFAAVCKTMDNTITADVTP--LLLPSPETKSTAAPSRGRSTSPRVRGGRPPSLRRSXXXXXXXXSPQRSGTAVRAGAVVASSWSTADRPDASRMGGDFTSAAVVK-VNTSKQGSRFAGTQDGLGTPPLTPASPVPSPAAAISAVSSSNNVVFFGSSYGRDCDDGDLSTKGDEVTLPLLPASDV-----SRVIEKVREVDECFPLTP-RRTPTTPNMPPPPPLCRTPQQNRAPRVDVGFGNFHPVVDWGAPGDVRAAFIQNVVERQAATVGEACVLVRAARVALGGTAGGGVVSSPLRVGGILGEGSFGIVKGASLSFLPGEFALKTLKAGADDNARYCARVEMIAMSRLANTPHPNIIAAVAIDDRAAAVGMPILLPRANGDFEQALRHGGWTIPAKLSCLKQVTSGVRYMHKSGIGHGDLKPANILLFDDGDGGYVPKISDFGFSRALGEMRPKMMGTPGSMPLEVMQASVPTCPSQDAFAMGVMAFTVCVNPDKVQANMFLSPHLFTAAEAKAKKALEAQGSSPFAMAERDIFERKVMRRIMRTGAFTMLMTEDNLHPDLGSLRVRGLVSAYLPGFLHHDVNVRENMRSFEHMMELFIDILEIQERYYESEKKRG-GSESEV*EA 2169
            MLKRI+ G+DQA  AGT+ SNTRSG  +GAR L   TTSV+GAVAS AAGV KSHLLPSAITT AKLNGGPL GARPAI +A ATETLAA VPA  LSLTSSTP +P AAVCK  D T T DVTP  LLLPSPE K TAAPSRGRSTSPRVRGGRPPS RRS        SPQR GTAVRA A+ ASSWS A RP  SR+GGDF+SAA  K V   KQGS  A T D   TPPLTPASPVPSPAAAIS V SSN V FFG+SYGRD D  DLS K DE     +    +     S V   + +     P+   +RT                 + +  R+DV  G+   +V     G++RAAFI NV +RQAATVGE C LV+AARVALGG+ GG   SS L   G++GEGSFGIV+GA+ SFLPGEFA+K LK GAD+NARYCARVEMI M+RLA +PHPN+I A+AIDDR AAVGMPILLPRA+GDF Q L  G W++  KLSCL+QV SGVR+MH++GIGHGDL P NILL DDGDG  VPKISDFG +RALGEMRPKMMGT GSMPLEVMQA V T  SQD FAMGVMAFTVCV PDKVQANMF+SP LFT AEAKAKKALEA+G+ PFAMAERD+FER +M R M T AF  L+T DNLHPDLGS RVRG+VS YL  FL  D+N R +M SFE +M   I+++E QE    ++++ G GSESE  +A
Sbjct:    1 MLKRIITGKDQAAFAGTSCSNTRSGASSGARELTIHTTSVVGAVASAAAGVVKSHLLPSAITTVAKLNGGPLGGARPAIMIAEATETLAAAVPATALSLTSSTPTRPVAAVCKAKDITTT-DVTPPLLLLPSPEAKPTAAPSRGRSTSPRVRGGRPPSPRRSPRALSRSPSPQRPGTAVRAAAMYASSWSAAARPAVSRVGGDFSSAAAAKGVKAPKQGSGHADTLDVSDTPPLTPASPVPSPAAAISEVWSSNTVSFFGTSYGRDDDGVDLSQKRDENRASPIKQRKIQPVRGSGVATSLNQTKLVVPVEAGKRTEKATAAASVEEGSDDCDKTKRARIDVLSGDIRSIVKGSERGEIRAAFIGNVRQRQAATVGEGCALVQAARVALGGSGGGIGASSSLHESGVIGEGSFGIVEGATHSFLPGEFAVKKLKEGADNNARYCARVEMIVMARLAKSPHPNVIGAIAIDDREAAVGMPILLPRAHGDFGQVLNDGDWSMTQKLSCLQQVASGVRHMHEAGIGHGDLTPPNILLVDDGDGECVPKISDFGLARALGEMRPKMMGTLGSMPLEVMQAPVRTSESQDTFAMGVMAFTVCVTPDKVQANMFISPDLFTVAEAKAKKALEAKGTGPFAMAERDLFERNMMERTMSTRAFESLLTVDNLHPDLGSARVRGMVSCYLSAFLATDLNDRGDMASFEKVMGDMIEMVEDQEETDNNDEEEGDGSESEAHKA 732          
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: A0A6H5L7R5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7R5_9PHAE)

HSP 1 Score: 667 bits (1722), Expect = 1.030e-224
Identity = 396/634 (62.46%), Postives = 435/634 (68.61%), Query Frame = 1
Query:    1 MLKRIVIGRDQAVPAGTAYSNTRSGVGTGARALPSRTTSVLGAVASVAAGVAKSHLLPSAITTTAKLNGGPLLGARPAIKVATATETLAAPVPAPVLSLTSSTPAKPFAAVCKTMDNTITADVTPLLLPSPETKSTAAPSRGRSTSPRVRGGRPPSLRRSXXXXXXXXSPQRSGTAVRAGAVVASSWSTADRPDASRMGGDFTSAAVVKVNTSKQGSRFAGTQDGLGTPPLTPASPVPSPAAAISAVSSSNNVVFFGSSYGRDCDDGDLSTKGDEVTLPLLPASDVSRVIEKVREVDECFPLTPRRTPTTPNMPPPPPLCRTPQQNRAPRVDVGFGNFHPVVDWGAPGDVRAAFIQNVVERQAATVGEACVLVRAARVALGGTAGGGVVSSPLRVGGILGEGSFGIVKGASLSFLPGEFALKTLKAGADDNARYCARVEMIAMSRLANTPHPNIIAAVAIDDRAAAVGMPILLPRANGDFEQALRHGGWTIPAKLSCLKQVTSGVRYMHKSGIGHGDLKPANILLFDDGDGGYVPKISDFGFSR--------------------------------ALGEMRPKMMGTPGSMPLEVMQASVPTCPSQDAFAMGVMAFTVCVNPDKVQANMFLSP 1806
            MLKRIV+G++QA PAGT+YS+TRS   +G R + S T   LGAVAS A  V K  LLPSA TT AKLNGGPL  ARP I +ATATETLAA VPA VLSLTSSTP                 DVTP LL S E  STAAPSRGR TSPR RGGRPPS  RS        SPQR+GTAVRA A+ AS W  A RP AS +GGDF+SAA VKVN SKQGSR+ GT D LG+ PLTP S VPSPA+AISA S  NN+ +FG  YG D  D DLS  GDE +L L                                             NRA  VDVGFGNFHPVVD   PG+VR AF+QNV++RQA+TV E C LVRAARVALGG+ GGG  +SPLRVGGILGEGSFG+V+GASLSFLPGEFALK LK  ADD ARYCARVEMI MSRL N PHPNI+ AVAIDDRAAAV MPILLPRANGDFEQ L+H GWT+PAKLSCL+QV  GVR+MHK+GIGHGDLKPANILLFD G G ++PKISDFGF+R                                ALGEMRPKMMGT GSMPLEVMQASVPT P QD FAMGVMAFTVCV P+K+QANMF+SP
Sbjct:  216 MLKRIVMGKEQAAPAGTSYSSTRSVARSGVRDMGSHTPQDLGAVASAATDVTKPLLLPSATTTVAKLNGGPLGSARPTIMIATATETLAAVVPAAVLSLTSSTPVXXXXXXXXXXXXXXX-DVTPRLLSSSEPMSTAAPSRGRPTSPRARGGRPPSPCRSTPSLSRSRSPQRAGTAVRAAAMNASYWPAAPRPAASSLGGDFSSAASVKVNISKQGSRYVGTLDALGSHPLTPVSAVPSPASAISAAS--NNLSYFGRRYGLDDHDVDLSENGDEDSLSL---------------------------------------------NRASSVDVGFGNFHPVVDSAEPGEVRTAFVQNVIDRQASTVEEDCALVRAARVALGGSEGGGGANSPLRVGGILGEGSFGVVEGASLSFLPGEFALKRLKEDADDKARYCARVEMIVMSRLVNNPHPNIVGAVAIDDRAAAVDMPILLPRANGDFEQVLKHDGWTMPAKLSCLQQVAYGVRHMHKAGIGHGDLKPANILLFDGGGGRFLPKISDFGFARGIGTNLPKPGHXNLTTRRDKSTPRPCPNNTDSALGEMRPKMMGTIGSMPLEVMQASVPTYPRQDTFAMGVMAFTVCVTPNKMQANMFISP 801          
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: A0A6H5JF73_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF73_9PHAE)

HSP 1 Score: 570 bits (1470), Expect = 9.350e-183
Identity = 460/1173 (39.22%), Postives = 518/1173 (44.16%), Query Frame = 1
Query:    1 MLKRIVIGRDQAVPAGTAYSNTRSGVGTGARALPSRTTSVLGAVASVAAGVAKSHLLPSAITTTAKLNGGPLLGARPAIKVATATETLAAPVPAPVLSLTSSTPAKPFAAVCKTMDNTITADVTPLLLPSPETKSTAAPSRGRSTSPRVRGGRPPSLRRSXXXXXXXXSPQRSGTAVRAGAVVASSWSTADRPDASRMGGDFTSAAVVK-VNTSKQGSRFAGTQDGLGTPPLTPASPVPSPAAAISAVSSSNNVVFFGSSYGRDCDDGDLSTKGDE-----VTLPLLPASDVS-----RVIEKVRE--VDECFPLTP--------RRTPTTPNMPPPPPLCRTPQQNRAPRVDVGFGNFHPVVDWGAPGDVRAAFIQNVVERQAATVGEACVLVRAARVALGGTAGGGVVSSPLRVGGILGEGSFGIVKGASLSFLPGEFALKTLK----------------------------------------------------------AGADDNA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYCARVEMIAMSRLANTPHPNIIAAVAIDDRAAAVGMPILLPRANGDFEQALRHGGWTIPAKLSCLKQVTSGVRYMHKSGIGHGDLKPANILLFDDGDGGYVPKISDFGFSRALGEMRPKMMGTPGSMPLEVMQASVPTCPSQDAFAMGVMAFTVCVNPDKVQANMFLSPHLFTAAEAKAKKALEAQGSSPFAMAERDIFERKVMRRIMRTGAFTMLMTEDNLHPDLGSLRVRGLVSAYLPGFLHHDVNVRENMRSFEHMMELFIDILEIQERYYESEKKRGGSESEV*EA 2169
            MLKRIV+G+DQA PAG +YSNTRSG  +GAR L   TTSVLGAVAS AAGV KSHLLPSA+TT AKLN GPL GARPAI  A ATETL A VPA VLS TSSTP +P AA CK  D T T DVTPL +PSP  KSTAAPSRGRSTSPR RG      RRS        SPQ  GTAVRA AV ASS S A RP  SR+G DF+SAA  K V   KQGS +AGT    GTPPLTPASPVPSPAAAIS V SSN V FFG+SYGRD D  DLS + DE        P     + +     R I+ VR   VD     T         +R  T     P           +  R+DV  G+   +V     G +RAAFI N+ +RQAATVGE C LV+AARVALGG  GG   SS L   G++GEGSFGIVKGA+ SFLPGEFA+K LK                                                             DD A                                                                                                                                                                                                                                                                                                                                                                                   R CA    +   RLA +PHPN+I A+AIDDR AAVGMPILLPRA+GDF Q L  G W++  KLSCL+QVTSGVR+MH++GIGHGDL   NILL DDGDG  VPKISDFG +RALGEMRPKMMGT GSMPLEVMQASV T  SQDAFAMGVMAFTVCV P+KVQANMF+SP+LFTAAEAKAKKALEA+G+ PFAMAERD+FERKVM R M T AF  L+T DNLHPDLGS RVRG+VS YL  FL  D++ R +M SFE +    I+++E QE   + E+   GSESE  +A
Sbjct:    1 MLKRIVMGKDQAAPAGASYSNTRSGASSGARELTVHTTSVLGAVASAAAGVVKSHLLPSAVTTLAKLNSGPLGGARPAIMTAAATETLTATVPASVLSPTSSTPTRPAAAACKATDITTT-DVTPLRMPSPGAKSTAAPSRGRSTSPRARGXXXXXPRRSPRTLSRSPSPQCLGTAVRAAAVDASSPSAAARPAVSRVGRDFSSAAAAKGVKAPKQGSGYAGTLGVSGTPPLTPASPVPSPAAAISEVWSSNTVSFFGTSYGRDDDGVDLSREVDEHAFSTANTPYPQQRNCAPPIEQRNIQPVRGSGVDTSINQTKLVASVDAGQRADTATAAAPVGKGSDDCDDTKRTRIDVLSGDIRSIVKGSERGQIRAAFIGNMRQRQAATVGEGCALVQAARVALGGGGGGIGASSSLYESGVIGEGSFGIVKGATHSFLPGEFAVKKLKEVRGPAARAGRLVQGGGSWLLIHHFFASRLGRGGRCTNVNAPLRPCLANNPHPNIIGAVAIDDQAAAVGMPILLPSANGNSEQGLNDGDRSMPQKLTYVCVCVCQYRRALRILLGRRRVDVKYPPTCPLHPEAVRKGVRVGGTETSVSGMLSADDFVGMSDTPEGLQLQVDAAKKFTDKRRLSANVKKSAVMVCNEKEEEPVEHGWKWGIEEIAVVDQYTYLGVEIAKDCSWNPHMSKVAEKGKARAGKLHPMLTNRHLDTCIKLTVLKSVIVPPLEYAGEGSIGDPITTVGKRREEADMAVSHVRDGMCGIGEERLPRIAWEANWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLGTEGLKGFKEKISVACAEREEQNXVAVVGHRRWVEKAGRDIVRIDRLGKTFLSRLWFLQRQKVMKYLYCCASTSHSSPSRVCAARCCVVPPRLAESPHPNVIGAIAIDDREAAVGMPILLPRAHGDFGQVLNDGDWSMTQKLSCLQQVTSGVRHMHQAGIGHGDLTSPNILLVDDGDGECVPKISDFGLARALGEMRPKMMGTLGSMPLEVMQASVRTSESQDAFAMGVMAFTVCVTPEKVQANMFISPYLFTAAEAKAKKALEAKGTGPFAMAERDLFERKVMERTMSTRAFEALLTVDNLHPDLGSARVRGMVSCYLSAFLATDLDDRGDMASFEKVTGDMIEMVEAQEGTNDDEEG-DGSESEAQKA 1171          
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: A0A6H5JP23_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP23_9PHAE)

HSP 1 Score: 408 bits (1048), Expect = 5.900e-123
Identity = 256/424 (60.38%), Postives = 285/424 (67.22%), Query Frame = 1
Query:    1 MLKRIVIGRDQAVPAGTAYSNTRSGVGTGARALPSRTTSVLGAVASVAAGVAKSHLLPSAITTTAKLNGGPLLGARPAIKVATATETLAAPVPAPVLSLTSSTPAKPFAAVCKTMDNTITADVTPLLLPSPETKSTAAPSRGRSTSPRVRGGRPPSLRRSXXXXXXXXSPQRSGTAVRAGAVVASSWSTADRPDASRMGGDFTSAAVVKVNTSKQGSRFAGTQDGLGTPPLTPASPVPSPAAAISAVSSSNNVVFFGSSYGRDCDDGDLSTKGDEVTLPLLPASDVSRVIEKVREVDECFPLTPRRTPTTPNMPPPPPLCRTPQQNRAPRVDVGFGNFHPVVDWGAPGDVRAAFIQNVVERQAATVGEACVLVRAARVALGGTAGGGVVSSPLRVGGILGEGSFGIVKGASLSFLPGEFALKTL 1272
            MLKRIV+G+ QA  AGT+YS+TR    +  R + +    VLGAV S A  VA+ HLLPSA+TT AKLNGGPL GARPAI +ATA ETLAAPVPA VLSLTSSTPA+  AAVCKT  N  T DVTPLLLPS E+ STAAPSRGRSTSPR RGGRPPS  R         SP+RSGTAVRA AV AS WS A RP A  +  DF+SAA V+VN+SKQGS++ G  D LGTPPLTP S V SPA+AISA   SN   FFG SYG D  DGDL  KGD+ +L +LPA D                                        NRA  VDVGF NFHPVVDW  PG+VRA FI NV+ERQA+TVGE C LVRAARVA GG+ GGG  SSPLR GG  GEG  G+V+GASLSFLPGEF LK L
Sbjct:  600 MLKRIVMGKAQAALAGTSYSSTRRVASSVTRDMGNHAPQVLGAVTSAATDVAEPHLLPSAMTTVAKLNGGPLGGARPAIMIATAMETLAAPVPAAVLSLTSSTPAESSAAVCKTAGNHTT-DVTPLLLPSSESMSTAAPSRGRSTSPRERGGRPPSPCRWPPSFSRSPSPRRSGTAVRAAAVDASCWSAATRPAALSLEEDFSSAASVQVNSSKQGSQYVGALDALGTPPLTPVSAVQSPASAISA--GSNYASFFGRSYGLDDHDGDLPEKGDKASLSVLPACD----------------------------------------NRASSVDVGFENFHPVVDWAEPGEVRAVFIHNVIERQASTVGEGCALVRAARVAPGGSNGGGGASSPLRAGGAFGEGPLGVVEGASLSFLPGEFPLKRL 980          
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: D7FYH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH1_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 2.760e-109
Identity = 264/466 (56.65%), Postives = 293/466 (62.88%), Query Frame = 1
Query:    1 MLKRIVIGRDQAVPAGTAYSNTRSGVGTGARALPSRTTSVLGAVASVAAGVAKSHLLPSAITTTAKLNGGPLLGARPAIKVATATETLAAPVPAP--VLSLTSSTPAKPFAAVCKTMDNTITADVTPLLLPSPETKSTAAPSRGRSTSPRVRGGRPPSLRRSXXXXXXXXSPQ-RSGTAVRAGAVVASSWSTADRPDASRMGGDFTSAAVVKVNTSKQGSRFAGTQDGLGTPPLTPASPVPSPAAAISAVSSSNNVVFFGSSYGRDCDDGDLSTKGDEVTLPLLPASDVSRV------IEKVREVDECFPLTP----------RRTPTTPNMPPPPPLCRTPQQ--NRAPRVDVGFGNFHPVVDWGAPGDVRAAFIQNVVERQAATVGEACVLVRAARVALGGTAGGGVVSSPLRVGGILGEGSFGIVKGASLSFLPGEFALKTLKAGADDNARYCARVEMIAMSR 1335
            MLKRIV+ +DQA PAGT+YS++ SG  +GAR   + T+ VLGAVAS AAGVA+S LL SA    AK NGGPL  AR  I                  VLSL S  P+KPFA V KT D   T D   LLL S ETKSTA PSRGR TSPR R GRPPS RRSXXXXXXXX    RSGTAV A AV ASSWS A RP ASR+GGDF+ A   K  T K GSR  GT D  GTPPLTPASPVPSPA AISA SSS N  FFGS YGRD  DGDLS KGDEV   L PA D          +  VR      PL             RT T    P    + R+     N+ PR+DVG G+F  +V    PG +R AFI NV +R+   VGEAC LV+AARVALGG+ G     SPL+  GI+GEGSFGIV GA+ SFLPGEFA+K LK GAD NARYCARVEMI M+R
Sbjct:    5 MLKRIVLSQDQAAPAGTSYSSSSSGASSGARDQSTHTSKVLGAVASAAAGVARSKLLTSA----AKRNGGPLRRARTTIXXXXXXXXXXXXXXXXXAVLSLASPKPSKPFAPVRKTTDINAT-DAPLLLLTSSETKSTAVPSRGRPTSPRARVGRPPSPRRSXXXXXXXXXXXXRSGTAVGAAAVDASSWSAAARPAASRVGGDFSPAVADKDGTCKHGSREVGTLDASGTPPLTPASPVPSPAVAISAGSSSFNAPFFGSRYGRDDHDGDLSEKGDEVGPSLPPARDNGASPAEHGEVPPVRGSGAGTPLKQAKLVVPVDEGERTETAAAAPV---VARSSGDGDNKRPRIDVGHGDFGRIVKGAQPGVLRTAFITNVRQRREVAVGEACALVQAARVALGGSEGCAGARSPLQEIGIIGEGSFGIVGGATHSFLPGEFAVKRLKEGADKNARYCARVEMIVMAR 462          
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: D7FYH0_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH0_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 2.610e-82
Identity = 146/217 (67.28%), Postives = 165/217 (76.04%), Query Frame = 1
Query: 1522 MHKSGIGHGDLKPANILLFDDGDGGYVPKISDFGFSRALGEMRPKMMGTPGSMPLEVMQASVPTCPSQDAFAMGVMAFTVCVNPDKVQANMFLSPHLFTAAEAKAKKALEAQGSSPFAMAERDIFERKVMRRIMRTGAFTMLMTEDNLHPDLGSLRVRGLVSAYLPGFLHHDVNVRENMRSFEHMMELFIDILEIQ-ERYYESEKKRGGSESEV*EA 2169
            MHK+GIGH DL P NILL DDG GG +P++SDFG +RALGEMRPKMMGT GSMPLEVMQASVP CPSQD FAMG MAF +CV PDKVQANMF+SPHLFTAAEAKAKKALEA+G  P AM  RDIFER VM R M TGAFT LMT DNLHPDLG   VR +VS YLP FL  D+N R +M +FE +M   I ++E Q E   + +   G + SEV +A
Sbjct:    1 MHKAGIGHWDLTPPNILLVDDGYGGCIPQVSDFGLARALGEMRPKMMGTLGSMPLEVMQASVPACPSQDTFAMGAMAFIICVTPDKVQANMFISPHLFTAAEAKAKKALEAKGGGPLAMTLRDIFERNVMERTMSTGAFTTLMTVDNLHPDLGPTSVRDMVSCYLPTFLASDLNNRGDMATFEKVMGHIIKMVEAQGETKVDEQGGDGSAGSEVQQA 217          
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: A0A6H5JMV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV2_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 2.320e-68
Identity = 173/270 (64.07%), Postives = 186/270 (68.89%), Query Frame = 1
Query:    1 MLKRIVIGRDQAVPAGTAYSNTRSGVGTGARALPSRTTSVLGAVASVAAGVAKSHLLPSAITTTAKLNGGPLLGARPAIKVATATETLAAPVPAPVLSLTSSTPAKPFAAVCKTMDNTITADVTPLLLPSPETKSTAAPSRGRSTSPRVRGGRPPSLRRSXXXXXXXXSPQRSGTAVRAGAVVASSWSTADRPDASRMGGDFTSAAVVKVNTSKQG-----------SRFAGTQ---DGLGTPPLTPASPVPSPAAAISAVSSSNNVVFF 768
            MLKRIV G+DQA PAGT+YSNTR    +G+RAL   TTSV+GAVAS A  V KSHLLPS ITT  K NG  L GARPAI +ATATETL APVP+ VLSL+SSTPA+PFAAVCKT DNT T DV PLLLPS ETKSTA P RGR                 XXXXXXXX  QRSGTAVRA AV ASSWS A RP ASR+GG F SAA VK   +              S  A ++   DGLG PPLTPASPVP PAAAISAV SSNNV FF
Sbjct:    1 MLKRIVTGKDQAAPAGTSYSNTRGVASSGSRALTVHTTSVVGAVASAATDVTKSHLLPSTITTVFKRNGDALRGARPAIMMATATETLPAPVPS-VLSLSSSTPAEPFAAVCKTTDNTST-DVIPLLLPSSETKSTAPPFRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSGTAVRAAAVDASSWSAASRPAASRLGGHFCSAAAVKDGQATPVTHLREVTVIIVSTVASSEEALDGLGKPPLTPASPVPYPAAAISAVLSSNNVSFF 268          
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: A0A6H5L0Q5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q5_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.370e-54
Identity = 132/204 (64.71%), Postives = 145/204 (71.08%), Query Frame = 1
Query:    1 MLKRIVIGRDQAVPAGTAYSNTRSGVGTGARALPSRTTSVLGAVASVAAGVAKSHLLPSAITTTAKLNGGPLLGARPAIKVATATETLAAPVPAPVLSLTSSTPAKPFAAVCKTMDNTITADVTPLLLPSPETKSTAAPSRGRSTSPRVRGGRPPSLRRSXXXXXXXXSPQRSGTAVRAGAVVASSWSTADRPDASRMGGDFTS 612
            MLKRIV+G++Q  PAGT+YS+TRS   +G R + S     LGAVAS A  VAK HLLPSA++T AKLNGGPL GARPAI + TATETLAA VPA VLSLTSSTP K  A VCKT     T DVTP LLPS E  STAAPS GRSTSPR RGGRPPS  R+          Q SGT VRA AV ASSWS A RP AS +GGDF+S
Sbjct:  132 MLKRIVMGKEQMAPAGTSYSSTRSVASSGVRDMGSHAPQDLGAVASPATDVAKPHLLPSAMSTVAKLNGGPLGGARPAIMIVTATETLAAAVPAAVLSLTSSTPVKSSAPVCKT-GGKYTTDVTPRLLPSSEPMSTAAPSCGRSTSPRARGGRPPSPCRATPSLSRSPFLQCSGTVVRAAAVDASSWSAAARPAASSLGGDFSS 334          
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: D7FND9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND9_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 3.010e-41
Identity = 103/133 (77.44%), Postives = 109/133 (81.95%), Query Frame = 1
Query:  241 VATATETLAAPVPAPVLSLTSSTPAKPFAAVCKTMDNTITADVTPLLLPSPETKSTAAPSRGRSTSPRVRGGRPPSLRRSXXXXXXXXSPQRSGTAVRAGAVVASSWSTADRPDASRMGGDFTSAAVVKVNTS 639
            +ATATETL APVP+ VLSLTSS P++PFAAVCKT DNT T DV PLLLPS ETKSTAAPSRGRSTSPR R GRPPS RRS  XXXXXXSPQRSGTAVRA AV ASSWS A  P ASR+GG F+SAA VK   S
Sbjct:    2 MATATETLTAPVPSAVLSLTSSKPSEPFAAVCKTTDNTTTTDVIPLLLPSSETKSTAAPSRGRSTSPRARDGRPPSPRRSPRXXXXXXSPQRSGTAVRAAAVGASSWSAAAGPAASRLGGHFSSAAAVKNRAS 134          
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Match: A0A6H5JF80_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF80_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 3.940e-37
Identity = 113/307 (36.81%), Postives = 143/307 (46.58%), Query Frame = 1
Query: 1291 NARYCARVEMIAMSRLANTPHPNIIAAVAIDDRAAAVGMPILLPRANGDFEQALRHGGWTIPAKL--------SCLKQVTSGVRYMHKSGIGHGDLKPANILLFDDGDGGYVPKISDFGFSRALGEMRPKMMGTPGSMPLEVMQASVPTCPSQDAFAMGVMAFTVCVNPDKVQANMFLSPHLFTAAEAKAKKALEAQGSSPFAMAERDIFERKVMRRIMRTGAFTMLMTEDNLHPDLGSLRVRGL-------------VSAYLPGFLHHDVNVRENMRSFEHMMELFIDILEIQERYYESEKKRGGS 2148
            NAR  A + ++   RLA  PHPNII AV    +  +V +     RA+GDF Q L  G W I  KL        S    V SG+R++HK+G GHGDL P NILL DDG GG VP++SDFG +RA                                                               EAKAKK L+A G  P AM + + FER +M R M TG FT L+T DN HPDLG   VR L             +S YLP FL  D+N R +M +FE +M   I+++E Q     +E++R GS
Sbjct:   30 NARCVATLGILYCWRLAKNPHPNIIGAV----QPLSVCLSFY-SRAHGDFGQMLNDGDWVIAGKLRGRFAAYCSVADIVASGMRHIHKAGTGHGDLTPPNILLVDDGCGGCVPQVSDFGLARA---------------------------------------------------------------EAKAKKTLQANGGGPLAMTQINTFERNLMERTMATGVFTTLITVDNSHPDLGPTSVRDLDRTTGERGGQTPQLSCYLPTFLTSDLNNRGDMATFEKVMGHIIEMVEAQGEIKVNEQERDGS 268          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1094.757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYY1_ECTSI1.190e-27564.39Protein serine/threonine kinase n=1 Tax=Ectocarpus... [more]
A0A6H5L7R5_9PHAE1.030e-22462.46Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JF73_9PHAE9.350e-18339.22Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JP23_9PHAE5.900e-12360.38DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
D7FYH1_ECTSI2.760e-10956.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYH0_ECTSI2.610e-8267.28Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
A0A6H5JMV2_9PHAE2.320e-6864.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0Q5_9PHAE1.370e-5464.71Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FND9_ECTSI3.010e-4177.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF80_9PHAE3.940e-3736.81Protein kinase domain-containing protein n=1 Tax=E... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1094contigE-fasciculatus_F_contig1094:2547..9967 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score802.0
Seed ortholog evalue2.3e-229
Seed eggNOG ortholog2880.D7FYY1
KEGG koko:K05410
KEGG Pathwayko04014,ko04137,ko04620,ko04621,ko04622,ko04623,ko04657,ko05160,ko05161,ko05162,ko05164,ko05165,ko05167,ko05168,ko05169,map04014,map04137,map04620,map04621,map04622,map04623,map04657,map05160,map05161,map05162,map05164,map05165,map05167,map05168,map05169
EggNOG free text desc.IkappaB kinase activity
EggNOG OGsCOG0515@1,KOG4250@2759
EC2.7.11.10
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-19_002910.1
Exons10
Model size2947
Cds size2163
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927594.6127846-CDS-E-fasciculatus_F_contig1094:2546..31731622927594.6127846-CDS-E-fasciculatus_F_contig1094:2546..3173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 2547..3173 +
1695995611.9569461-CDS-E-fasciculatus_F_contig1094:2546..31731695995611.9569461-CDS-E-fasciculatus_F_contig1094:2546..3173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 2547..3173 +
1622927594.6242118-CDS-E-fasciculatus_F_contig1094:3358..36221622927594.6242118-CDS-E-fasciculatus_F_contig1094:3358..3622Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 3359..3622 +
1695995611.9665544-CDS-E-fasciculatus_F_contig1094:3358..36221695995611.9665544-CDS-E-fasciculatus_F_contig1094:3358..3622Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 3359..3622 +
1622927594.6365986-CDS-E-fasciculatus_F_contig1094:3794..41811622927594.6365986-CDS-E-fasciculatus_F_contig1094:3794..4181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 3795..4181 +
1695995611.9752967-CDS-E-fasciculatus_F_contig1094:3794..41811695995611.9752967-CDS-E-fasciculatus_F_contig1094:3794..4181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 3795..4181 +
1622927594.6460137-CDS-E-fasciculatus_F_contig1094:4532..45881622927594.6460137-CDS-E-fasciculatus_F_contig1094:4532..4588Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 4533..4588 +
1695995611.991803-CDS-E-fasciculatus_F_contig1094:4532..45881695995611.991803-CDS-E-fasciculatus_F_contig1094:4532..4588Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 4533..4588 +
1622927594.6558084-CDS-E-fasciculatus_F_contig1094:4970..51231622927594.6558084-CDS-E-fasciculatus_F_contig1094:4970..5123Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 4971..5123 +
1695995612.0029292-CDS-E-fasciculatus_F_contig1094:4970..51231695995612.0029292-CDS-E-fasciculatus_F_contig1094:4970..5123Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 4971..5123 +
1622927594.6666925-CDS-E-fasciculatus_F_contig1094:6040..61861622927594.6666925-CDS-E-fasciculatus_F_contig1094:6040..6186Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 6041..6186 +
1695995612.0160549-CDS-E-fasciculatus_F_contig1094:6040..61861695995612.0160549-CDS-E-fasciculatus_F_contig1094:6040..6186Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 6041..6186 +
1622927594.678741-CDS-E-fasciculatus_F_contig1094:6540..67131622927594.678741-CDS-E-fasciculatus_F_contig1094:6540..6713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 6541..6713 +
1695995612.0343475-CDS-E-fasciculatus_F_contig1094:6540..67131695995612.0343475-CDS-E-fasciculatus_F_contig1094:6540..6713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 6541..6713 +
1622927594.7228374-CDS-E-fasciculatus_F_contig1094:7366..74591622927594.7228374-CDS-E-fasciculatus_F_contig1094:7366..7459Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 7367..7459 +
1695995612.0463688-CDS-E-fasciculatus_F_contig1094:7366..74591695995612.0463688-CDS-E-fasciculatus_F_contig1094:7366..7459Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 7367..7459 +
1622927594.7386756-CDS-E-fasciculatus_F_contig1094:8339..84411622927594.7386756-CDS-E-fasciculatus_F_contig1094:8339..8441Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 8340..8441 +
1695995612.0573652-CDS-E-fasciculatus_F_contig1094:8339..84411695995612.0573652-CDS-E-fasciculatus_F_contig1094:8339..8441Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 8340..8441 +
1622927594.759094-CDS-E-fasciculatus_F_contig1094:9021..91831622927594.759094-CDS-E-fasciculatus_F_contig1094:9021..9183Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 9022..9183 +
1695995612.067976-CDS-E-fasciculatus_F_contig1094:9021..91831695995612.067976-CDS-E-fasciculatus_F_contig1094:9021..9183Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1094 9022..9183 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927594.7736092-UTR-E-fasciculatus_F_contig1094:9183..99671622927594.7736092-UTR-E-fasciculatus_F_contig1094:9183..9967Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1094 9184..9967 +
1695995612.076423-UTR-E-fasciculatus_F_contig1094:9183..99671695995612.076423-UTR-E-fasciculatus_F_contig1094:9183..9967Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1094 9184..9967 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1094.757.1prot_E-fasciculatus_F_contig1094.757.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1094 2547..9183 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1094.757.1

>prot_E-fasciculatus_F_contig1094.757.1 ID=prot_E-fasciculatus_F_contig1094.757.1|Name=mRNA_E-fasciculatus_F_contig1094.757.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=721bp
MLKRIVIGRDQAVPAGTAYSNTRSGVGTGARALPSRTTSVLGAVASVAAG
VAKSHLLPSAITTTAKLNGGPLLGARPAIKVATATETLAAPVPAPVLSLT
SSTPAKPFAAVCKTMDNTITADVTPLLLPSPETKSTAAPSRGRSTSPRVR
GGRPPSLRRSPPSLSRSPSPQRSGTAVRAGAVVASSWSTADRPDASRMGG
DFTSAAVVKVNTSKQGSRFAGTQDGLGTPPLTPASPVPSPAAAISAVSSS
NNVVFFGSSYGRDCDDGDLSTKGDEVTLPLLPASDVSRVIEKVREVDECF
PLTPRRTPTTPNMPPPPPLCRTPQQNRAPRVDVGFGNFHPVVDWGAPGDV
RAAFIQNVVERQAATVGEACVLVRAARVALGGTAGGGVVSSPLRVGGILG
EGSFGIVKGASLSFLPGEFALKTLKAGADDNARYCARVEMIAMSRLANTP
HPNIIAAVAIDDRAAAVGMPILLPRANGDFEQALRHGGWTIPAKLSCLKQ
VTSGVRYMHKSGIGHGDLKPANILLFDDGDGGYVPKISDFGFSRALGEMR
PKMMGTPGSMPLEVMQASVPTCPSQDAFAMGVMAFTVCVNPDKVQANMFL
SPHLFTAAEAKAKKALEAQGSSPFAMAERDIFERKVMRRIMRTGAFTMLM
TEDNLHPDLGSLRVRGLVSAYLPGFLHHDVNVRENMRSFEHMMELFIDIL
EIQERYYESEKKRGGSESEV*
back to top

mRNA from alignment at E-fasciculatus_F_contig1094:2547..9967+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1094.757.1 ID=mRNA_E-fasciculatus_F_contig1094.757.1|Name=mRNA_E-fasciculatus_F_contig1094.757.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7421bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1094:2547..9967+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTGAAGCGCATCGTCATCGGGCGAGACCAAGCGGTACCCGCCGGCAC CGCCTACAGCAACACCCGCAGCGGCGTCGGCACCGGTGCCAGGGCGCTAC CAAGCCGCACAACTTCGGTTCTGGGTGCCGTCGCTAGCGTCGCTGCAGGG GTCGCCAAGTCGCACCTGCTTCCCTCCGCGATCACGACGACCGCTAAGCT CAACGGCGGTCCGCTCCTTGGTGCAAGACCGGCCATCAAGGTCGCCACGG CGACGGAGACGCTGGCGGCACCGGTGCCGGCGCCGGTGTTGAGCCTGACC TCCTCGACGCCCGCTAAGCCGTTCGCCGCCGTGTGCAAGACGATGGACAA CACCATCACCGCCGATGTGACCCCGCTGCTGCTGCCGTCGCCGGAGACAA AGTCGACGGCCGCCCCTTCCCGCGGAAGGTCCACCTCGCCTCGGGTACGC GGCGGGCGCCCACCGTCCCTGCGCCGGTCGCCGCCATCCCTCTCCCGCTC GCCATCTCCACAACGCTCAGGTACAGCCGTGCGCGCGGGAGCGGTGGTTG CTTCTTCTTGGTCCACTGCTGATCGGCCGGACGCCTCGAGGATGGGTGGG GATTTCACCTCTGCTGCCGTGGTAAAGGTGCGGTCTAGACGAAATTCCCG TGACATGGGAATGTCTGTGTGTCTTGTATCTATGCGCTCGTACCCCCACT AGCCCCTCGGGTTTGCCGGAATTTGTATCTCACGCTTACCATGGTGTCTT GTTTTCGTAACAAGCCCTTCCCTCTCCCCGATATTTCTCTTTCCGCCAAT GTCAAATGCTAGGTCAATACTTCCAAGCAGGGGTCACGGTTCGCAGGCAC CCAGGACGGTTTGGGCACGCCTCCGCTCACCCCAGCATCTCCCGTCCCTT CTCCTGCCGCCGCCATCTCTGCGGTCTCGAGCTCCAACAACGTCGTCTTC TTCGGAAGCAGCTACGGCCGCGACTGCGATGACGGTGACCTCTCGACGAA GGGTGATGAGGTTACCCTGCCTCTCCTGCCGGCGAGTGACGTGAGTAGGG TGATTGAGAAGGTCAGGGAGGTAGATGTCTCAGAATTTGTGAAACGAACA TGCTATTAATACTGCAGTGTGCTAAGATGCGCCCGCGCGCCGCCTGCTAC ATAGCACAGAAGGCCACACCCGAGATCGCCTAGAACGGCCCAATATCCTT GTGATGCACAACAAGTCCAACGGGCAGCTCGTGAACAACGCCTGAAAGGA ATGTTTTCCCCTGACCCCACGACGCACCCCCACCACCCCAAACATGCCTC CTCCACCGCCCTTATGCCGTACCCCTCAACAGAACCGTGCCCCACGCGTC GACGTCGGGTTCGGGAACTTCCATCCCGTCGTGGACTGGGGCGCGCCCGG CGATGTCAGGGCCGCGTTCATCCAGAACGTGGTTGAACGCCAGGCAGCGA CGGTGGGAGAAGCCTGCGTGCTGGTTCGGGCGGCCCGCGTCGCTCTCGGC GGAACCGCGGGCGGCGGTGTTGTGAGCTCGCCATTGCGAGTGGGCGGCAT CCTCGGAGAGGGGTCATTCGGCATCGTCAAGGGCGCCAGCCTGAGCTTCC TGCCCGGGGAGTTCGCGCTCAAGACGCTCAAAGCGGTGAGAGTCCCCGCG ACTGTGAGGAAAGCTTGTGCAGAGTCGGGGGAGCTGGCTCTTGGCATGTC ATCTAGATACCACTCCTTTGCGAGCGGGTTTGGGTAGGGCGTTGTGGTGG TCGCAGCGGATGTTCTGGAAGACGCTTTCCATTGGTTTCTTGCTACAGTA CAGTGGGAGCGTTCGAAGAAATTCCAGGAGAGGTACAACGTGCGATTTTC GCTCGTGTACGTTCAGGACCGATTAGAAATTTCGTTGGAAGCACCGCGGC TGGATAAAAATCTGAAACTTCGAAACCACGTAACCCATGTTGACAATTTG TGCGCATCTACTCGAAAATATATACCTGCTTCCCAGGGTGCGGATGACAA CGCGAGATACTGCGCCCGCGTGGAGATGATCGCAATGAGCCGGTGAGAAC GTTGCCAGTAGTATTGAGTTCTAGGAAACGTCAAGCCACACCACCCGAAA CGGCCTGATGCGATGAGGTGTATACCAGCCTTGGCATTGTTGTTCTCCAC ATGGAGGCCGCCACGGCCGTATGTCGTACGTGACACGCGTTTGTGGGCGG CATATATGGGTGAAACGCCTCCCACGCTCAAAACATCACACAAAACCATC TACCAATATGCTCAAAGCATGTTTTCTCCTTCCCTCACGATGCTGTCATG ACCTGTAGCAAAGACGAACACGAACCACGAATGTACAGCGAAGTGTGCAG TCTGTGTACGTAAGCGCCTCGCACTTTCCACCCTCGCGTGTGTTGCCCGC TGTTGTGCTGTTGTCCCACACCAGCCTCGCGAACACCCCGCATCCGAACA TCATCGCGGCGGTCGCGATCGACGACCGAGCAGCGGCTGTGGGCATGCCG ATCCTGCTTCCGAGGGCAAACGGCGACTTTGAGCAAGCGCTTAGGCACGG CGGCTGGACCATACCCGCCAAGCTGAGGTGTGTGTTTGGATGTGTGTGTA TGCTTTTATTATTAGCATCGACCGCGCTAACCGGCTGACCAATGAGAAGA CGTCAGTCTCAGTACGGCGGAAACACAAAATATTTCTATAGTCAACTATC TGGGACCCCTGGACCGAGCGTCGTGGGGGGAGCTACGCTATTCTCAGGAT TAAAGACAGATGCCGTAGCACTACCAGAAGAAAACTGCACGTGTCTACTA AGACTGCTACCTTGCACTCGACTTCGTTTAGGAGTGCTTTCTCCATCATG TGTGTGTGTGTGTGTGCACCATTTCAGCTGTGCTGCGCTGGGGAGTTTGT ATGATTGAGGGTACCGATTTGTAATGCTCCCCCTACACCTGAACCACGCG AAGTATGGAATACATCACTGCCACATGTCTACCAGAGGTACACGAAGACG TCATGGGAACAGTGTCCGCGAAGCTTTCATTTAGACAGGGTAACTCAAGA AGGGAGAGATATCTCATAACGCGGGGTGTGGTTCCAACCAAAATTCGAAC TTACGTAGTGGCACTCCTTCGCATAGTAGACGCACATGCGGACTGTGCGG AGTGTACAAAAGTAAATCGAATCGATAGTTCTTTCAAAGAGTCAGGGGAA TGATGTGACAGCTTCGATGAGGCATGGCACAGATGAGGTGTTATTCAGCG TATTGTGGCGTGGCAGCCATCGTTCGTTGCACGGACAGGCCACCGGTGCA CGCCTCGCATCTTCGAAGTCTAAATAATTTAAGAACAACGCGCTTTCCAC TTTCTGAGACATTCTCAATTACCGCGCTCCACTCTCGCCACAAACCATTG TTTTGCTGAGAACACCGAAGGTTCACATCATAGCCCTCTCTGTTCTGTCT GATTTAATGCGACACACGCCTCCCGCCTGCAACTACCACGACAGCTGCCT GAAGCAGGTCACCTCCGGCGTGCGCTACATGCACAAGTCAGGCATCGGCC ACGGGGATCTCAAGCCGGCCAACATCCTGCTGTTTGACGACGGTGACGGG GGATACGTGCCCAAGATCTCCGACTTCGGGTTTTCCCGAGGTGAAAGAGA GACAGATATGATACACCCGTACACCACCGTTTAGGGGGGCAGCACCCGTC GATACAGCGGAGGAGCAAGAGAGATGCACCACGCCGATGTCGCGTGTTAG CATGAGAAGTGTGCCTATTTCCATCTCTGGATTGATTGGTTGTTGAGAGA GGATGTTGTTGGCACAGAAAATATACGTACAGGGGCGGGGGTGCATCATG TGGCGGTGCTCCAGACATAATTTCGAGGTGAAATCTCCCACATGGAGAGG AAGAAAATGGGCACAACGACCCTCCATCACCACAACCTTACAACGAGGCG AGATAAAAGTAACCCCGCCCTCCTCTCCTATGCCACTGGTCCAGCGCTGG GAGAGATGAGGCCCAAGATGATGGGCACTCCTGGGAGCATGCCTCTTGAG GTGATGCAGGCATCGGTACCGACTTGCCCAAGCCAGGACGCATTCGCGAT GGGTGTGATGGCCTTCACCGTCTGCGTGAACCCCGACAAGGTGCAGGCGA ACATGTTCCTCTCGCCGGTGAGACTAAAGGAGAGGTCGCGTGTAGGGCTC TTGTCTCACAAGTAAGAATCGTGAGTCTATGTGGACGTCTGCTATCCGAG TTGGACGCTTGTGTGTACACTCCTCCAGGTTGGAGAGAGCAGTCTCGTTG CGGAGTTTCGTGTCAAACCGCCCGCCACGTGGGAAATTTGCTCCGAAATG TGTACGACCCATTCGGTGTCCTTCCACGAAGCAAGCACGCAGGTTAGGTA GTATTCGAATGGAGGGTTTGCAGGAACACCTCACCTCATTCGGAGTGCTA TTTAGGTATGGGAGCTTGCGGTCACGGAATTTGATTTCCTTACATGTCAT GTGAAAACGGCAGCAGCAGCAACAACGACAACAACCTTATCTCGCCGAGA GGAGCAGTAGCAACACAACGGAATCATACAATCGTTAAGTAAATATCGCT CTAGGCATCAAGTGCAGATTGTTTGGGGGCGGGGCGGTATGGCGTCCACG TGATAACGTATGCAGACGCAAGCTGTTTGTTCTCTAACAACACCGGGGGG GCAGGTACACCAAGAGCCCGTCACGATGTCGGTTACCCTTTGTTTCCAAA AAGTATTGCGTCGTTTCGTCCGTTCTTGATGCCTCTCTTTGTTTCGCCGT TTTTTCGTTGACTGAAACAGCACCTGTTCACCGCTGCGGAGGCAAAGGCC AAGAAGGCACTGGAGGCACAGGGGAGCAGTCCGTTCGCCATGGCGGAGAG AGATATCTTTGAGGTGCGTACATCCTACCTTGCTTGTACGCCACTTACCC ATACTTGCCACGTTGTTGCTTGAGTCGACCAAGACATTTTTAACCATGCG GCCAAGGCCAAGGCGGGTATTACTTGGCGCTCTCCCTGCAGGTCGGTCGG TAGGTAGGAAATGCGTGGGCGACATGTGTGTGAAGAAGTTTTAGATTTGT TTTCCTCCGTGGAAGGTGTCGATGCATCGACACCTTCCACGGAGGATAAA AAAACTAAACCTTCATTTTTTAGATTTCGTGATTCATTCCGACCGTATGC TCCCGATCGTCGAGAATCTCGTTCTCTGGGGGGGGTGTCGAAAAGAAAAC ACCCTAAACGCACGGAGATGCGTTCTTCCTAGCCCGTGTAAATATCGATT GCTTCCCTCGGTTTACCGAGGTAGGCAGCAGCACTCACTCCACTCAAGCT GCCGAACACTTCTTCTCGGCAAACCCTTCAGTTTACTCCGGGCTGGTTGG AATTGTTATCAGAGTTTCTCCGTGACAAAACAAAATGGTGTCATACTGCC CGAAAGCCGGCTACAACGAGAGAGTCAAACTATCCAAAATTGTATGCGTG TCTACCATACACATTCCAATTTTCAGATTTAGGCTGAGCCTTCGAGCAGT CGTTTTTTTTTACATGTCTTTCCAGCTCTTGATTTGACATGTGCCACTGT AGGTCAGGCGTACGGACGGCCACTAGATGTACACCATCGCGCTGACTCTA ACAAGAAAACTACAACCGTCCGCCATCAATCCACTAATGCACCATGTACC ATGCTCCGAGGACATTTCACACCCACCCTCTCCTTCCGCGACATTTCCGG TGCTACCATGTACTACATTCCCCGGCGATTATTCTTTGCTTAGCGGAAAG TCATGAGGAGGATAATGAGGACAGGTGCCTTCACGATGCTCATGACGGAA GACAACCTGCACCCGGACCTGGGCTCCCTTCGTGTGAGGGGCTTGGTGAG TGATTTAAGCGCCCCACATCGGACCTCCGCCGCAACACCACATGCCATAG ACTACCCTCACGGCTGCACACCCCCATCGGTTACAGTGGGTGCGCGTGTG AGTTTTGATTTTCCCTCTGCTTTGGGAAGGGGAGCGGGGGGTGGTGGTTC TTTCCAGATCCCCGCCTTTGTTGGTCGATGCTGCCGTTGCTACCACAGTT GTTGTGTTGTTGTTGTTGTTGCTGGCTTGGCTCCAACAACCCGTGTAGGC TGCAAAGCCAGAACCTCTGTATATCGATACAACCGGTAAAATAGGTCGCA GCTTTGCCCCGAGGATTCTGAGATATGTGATTCCTACGCCTACCCCGACC CAGACTAGAAAGAATTCCGCCCGGGTTAGCCTGCATGGCCGTGTGCTTGA TTTATTGAAGAGTCACAGCGGCTTCCATAAGTGCCAAGTGTTGGACGTGC ACTGGAGCCGGCGTACCTCTTCCCATGATGTGGTACCGAGTTAAGCCTTA AGGGGGCTCTCGTCTAGCCTACGCTCATTCCATCATGCGTTTCGTTCTCT CACGGTGACATCCCGCTGCACACAGGTGTCGGCCTACCTCCCTGGATTCT TACACCACGACGTGAACGTCCGCGAAAACATGAGGTCTTTCGAGCACATG ATGGAACTCTTCATCGACATTTTGGAGATCCAGGAAAGGTACTACGAGAG CGAGAAGAAACGAGGCGGGTCTGAGTCTGAGGTGTAGGAGGCATAGATAG GGACAGCCAGTAGTGGCCGAGGTTGAGACGGTGTTGACGACGTCTGCCTG CCTGGAGGGCAGCGCGGCGTGTACTACTGTAAGGCGAGCGCTGTTGGTCG AGAATACGCACAAAAGTCGACGGGACGAGACCATGTCAACCGTACCTTGC TTGTTTCCAAGTGTAGCTCCTCTCTTCGTTAGTGCGACCGGCACATTGCT TATGGTCGAAGAAACAGAGCGTTTTAGGGCGCTCAACACCGATACCAAAG CGTGCGTTCCACACTTGTCTGGTCTCGAGTTCATGTTCATTTCTTCTCCG TTTCCTTCCTACACATGTTTTCTAGGGGTTACCGGTACCTTCTAGTCTAG AACGTGGCGACTGTCGCTGTCGCTGCTACTGAAACGTGTTTCGCTTCACC GCGACAACTTTAACTTTTACAATGATGAATACGCGTTGTTTTAGCACCAG GTAGTATATATTTTGTGTAGTTGGTGTCGTTCTTGTGCCTCCTGCATCTC GTGTGCCTTGTTATGTGGGCGTACGTGTGCGTACTTTTCGCGGGGGTGCG CGGCCTGCTTTCCAGCGCAGAAGGTGGTATGGTGGGGAGGCTAGTGTCGG TGACGGCCATGGTAGCTGCGTGGCCGGTGGTATCGTCTAGGATGGCGAGA TCACCCAGCTTGTGGCAGGGTGAGGGTAGGTGGTGCTTGGTATGAACCTG CCGGTCGGTGCGGGTGGTGGTCTGCCATTTCCGGGAGGAGACAAGATCCC TTCCAACGAGGTACACGTGCT
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1094:2547..9967+

>mRNA_E-fasciculatus_F_contig1094.757.1 ID=mRNA_E-fasciculatus_F_contig1094.757.1|Name=mRNA_E-fasciculatus_F_contig1094.757.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4326bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1094:2547..9967+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTGAAGCGCATCGTCATCGGGCGAGACCAAGCGGTACCCGCCGGCAC
CGCCTACAGCAACACCCGCAGCGGCGTCGGCACCGGTGCCAGGGCGCTAC
CAAGCCGCACAACTTCGGTTCTGGGTGCCGTCGCTAGCGTCGCTGCAGGG
GTCGCCAAGTCGCACCTGCTTCCCTCCGCGATCACGACGACCGCTAAGCT
CAACGGCGGTCCGCTCCTTGGTGCAAGACCGGCCATCAAGGTCGCCACGG
CGACGGAGACGCTGGCGGCACCGGTGCCGGCGCCGGTGTTGAGCCTGACC
TCCTCGACGCCCGCTAAGCCGTTCGCCGCCGTGTGCAAGACGATGGACAA
CACCATCACCGCCGATGTGACCCCGCTGCTGCTGCCGTCGCCGGAGACAA
AGTCGACGGCCGCCCCTTCCCGCGGAAGGTCCACCTCGCCTCGGGTACGC
GGCGGGCGCCCACCGTCCCTGCGCCGGTCGCCGCCATCCCTCTCCCGCTC
GCCATCTCCACAACGCTCAGGTACAGCCGTGCGCGCGGGAGCGGTGGTTG
CTTCTTCTTGGTCCACTGCTGATCGGCCGGACGCCTCGAGGATGGGTGGG
GATTTCACCTCTGCTGCCGTGGTAAAGATGCTGAAGCGCATCGTCATCGG
GCGAGACCAAGCGGTACCCGCCGGCACCGCCTACAGCAACACCCGCAGCG
GCGTCGGCACCGGTGCCAGGGCGCTACCAAGCCGCACAACTTCGGTTCTG
GGTGCCGTCGCTAGCGTCGCTGCAGGGGTCGCCAAGTCGCACCTGCTTCC
CTCCGCGATCACGACGACCGCTAAGCTCAACGGCGGTCCGCTCCTTGGTG
CAAGACCGGCCATCAAGGTCGCCACGGCGACGGAGACGCTGGCGGCACCG
GTGCCGGCGCCGGTGTTGAGCCTGACCTCCTCGACGCCCGCTAAGCCGTT
CGCCGCCGTGTGCAAGACGATGGACAACACCATCACCGCCGATGTGACCC
CGCTGCTGCTGCCGTCGCCGGAGACAAAGTCGACGGCCGCCCCTTCCCGC
GGAAGGTCCACCTCGCCTCGGGTACGCGGCGGGCGCCCACCGTCCCTGCG
CCGGTCGCCGCCATCCCTCTCCCGCTCGCCATCTCCACAACGCTCAGGTA
CAGCCGTGCGCGCGGGAGCGGTGGTTGCTTCTTCTTGGTCCACTGCTGAT
CGGCCGGACGCCTCGAGGATGGGTGGGGATTTCACCTCTGCTGCCGTGGT
AAAGGTCAATACTTCCAAGCAGGGGTCACGGTTCGCAGGCACCCAGGACG
GTTTGGGCACGCCTCCGCTCACCCCAGCATCTCCCGTCCCTTCTCCTGCC
GCCGCCATCTCTGCGGTCTCGAGCTCCAACAACGTCGTCTTCTTCGGAAG
CAGCTACGGCCGCGACTGCGATGACGGTGACCTCTCGACGAAGGGTGATG
AGGTTACCCTGCCTCTCCTGCCGGCGAGTGACGTGAGTAGGGTGATTGAG
AAGGTCAGGGAGGTAGATGTCAATACTTCCAAGCAGGGGTCACGGTTCGC
AGGCACCCAGGACGGTTTGGGCACGCCTCCGCTCACCCCAGCATCTCCCG
TCCCTTCTCCTGCCGCCGCCATCTCTGCGGTCTCGAGCTCCAACAACGTC
GTCTTCTTCGGAAGCAGCTACGGCCGCGACTGCGATGACGGTGACCTCTC
GACGAAGGGTGATGAGGTTACCCTGCCTCTCCTGCCGGCGAGTGACGTGA
GTAGGGTGATTGAGAAGGTCAGGGAGGTAGATGAATGTTTTCCCCTGACC
CCACGACGCACCCCCACCACCCCAAACATGCCTCCTCCACCGCCCTTATG
CCGTACCCCTCAACAGAACCGTGCCCCACGCGTCGACGTCGGGTTCGGGA
ACTTCCATCCCGTCGTGGACTGGGGCGCGCCCGGCGATGTCAGGGCCGCG
TTCATCCAGAACGTGGTTGAACGCCAGGCAGCGACGGTGGGAGAAGCCTG
CGTGCTGGTTCGGGCGGCCCGCGTCGCTCTCGGCGGAACCGCGGGCGGCG
GTGTTGTGAGCTCGCCATTGCGAGTGGGCGGCATCCTCGGAGAGGGGTCA
TTCGGCATCGTCAAGGGCGCCAGCCTGAGCTTCCTGCCCGGGGAGTTCGC
GCTCAAGACGCTCAAAGCGGAATGTTTTCCCCTGACCCCACGACGCACCC
CCACCACCCCAAACATGCCTCCTCCACCGCCCTTATGCCGTACCCCTCAA
CAGAACCGTGCCCCACGCGTCGACGTCGGGTTCGGGAACTTCCATCCCGT
CGTGGACTGGGGCGCGCCCGGCGATGTCAGGGCCGCGTTCATCCAGAACG
TGGTTGAACGCCAGGCAGCGACGGTGGGAGAAGCCTGCGTGCTGGTTCGG
GCGGCCCGCGTCGCTCTCGGCGGAACCGCGGGCGGCGGTGTTGTGAGCTC
GCCATTGCGAGTGGGCGGCATCCTCGGAGAGGGGTCATTCGGCATCGTCA
AGGGCGCCAGCCTGAGCTTCCTGCCCGGGGAGTTCGCGCTCAAGACGCTC
AAAGCGGGTGCGGATGACAACGCGAGATACTGCGCCCGCGTGGAGATGAT
CGCAATGAGCCGGGTGCGGATGACAACGCGAGATACTGCGCCCGCGTGGA
GATGATCGCAATGAGCCGCCTCGCGAACACCCCGCATCCGAACATCATCG
CGGCGGTCGCGATCGACGACCGAGCAGCGGCTGTGGGCATGCCGATCCTG
CTTCCGAGGGCAAACGGCGACTTTGAGCAAGCGCTTAGGCACGGCGGCTG
GACCATACCCGCCAAGCTGAGCCTCGCGAACACCCCGCATCCGAACATCA
TCGCGGCGGTCGCGATCGACGACCGAGCAGCGGCTGTGGGCATGCCGATC
CTGCTTCCGAGGGCAAACGGCGACTTTGAGCAAGCGCTTAGGCACGGCGG
CTGGACCATACCCGCCAAGCTGAGCTGCCTGAAGCAGGTCACCTCCGGCG
TGCGCTACATGCACAAGTCAGGCATCGGCCACGGGGATCTCAAGCCGGCC
AACATCCTGCTGTTTGACGACGGTGACGGGGGATACGTGCCCAAGATCTC
CGACTTCGGGTTTTCCCGAGCTGCCTGAAGCAGGTCACCTCCGGCGTGCG
CTACATGCACAAGTCAGGCATCGGCCACGGGGATCTCAAGCCGGCCAACA
TCCTGCTGTTTGACGACGGTGACGGGGGATACGTGCCCAAGATCTCCGAC
TTCGGGTTTTCCCGAGCGCTGGGAGAGATGAGGCCCAAGATGATGGGCAC
TCCTGGGAGCATGCCTCTTGAGGTGATGCAGGCATCGGTACCGACTTGCC
CAAGCCAGGACGCATTCGCGATGGGTGTGATGGCCTTCACCGTCTGCGTG
AACCCCGACAAGGTGCAGGCGAACATGTTCCTCTCGCCGCGCTGGGAGAG
ATGAGGCCCAAGATGATGGGCACTCCTGGGAGCATGCCTCTTGAGGTGAT
GCAGGCATCGGTACCGACTTGCCCAAGCCAGGACGCATTCGCGATGGGTG
TGATGGCCTTCACCGTCTGCGTGAACCCCGACAAGGTGCAGGCGAACATG
TTCCTCTCGCCGCACCTGTTCACCGCTGCGGAGGCAAAGGCCAAGAAGGC
ACTGGAGGCACAGGGGAGCAGTCCGTTCGCCATGGCGGAGAGAGATATCT
TTGAGCACCTGTTCACCGCTGCGGAGGCAAAGGCCAAGAAGGCACTGGAG
GCACAGGGGAGCAGTCCGTTCGCCATGGCGGAGAGAGATATCTTTGAGCG
GAAAGTCATGAGGAGGATAATGAGGACAGGTGCCTTCACGATGCTCATGA
CGGAAGACAACCTGCACCCGGACCTGGGCTCCCTTCGTGTGAGGGGCTTG
CGGAAAGTCATGAGGAGGATAATGAGGACAGGTGCCTTCACGATGCTCAT
GACGGAAGACAACCTGCACCCGGACCTGGGCTCCCTTCGTGTGAGGGGCT
TGGTGTCGGCCTACCTCCCTGGATTCTTACACCACGACGTGAACGTCCGC
GAAAACATGAGGTCTTTCGAGCACATGATGGAACTCTTCATCGACATTTT
GGAGATCCAGGAAAGGTACTACGAGAGCGAGAAGAAACGAGGCGGGTCTG
AGTCTGAGGTGTAGGTGTCGGCCTACCTCCCTGGATTCTTACACCACGAC
GTGAACGTCCGCGAAAACATGAGGTCTTTCGAGCACATGATGGAACTCTT
CATCGACATTTTGGAGATCCAGGAAAGGTACTACGAGAGCGAGAAGAAAC
GAGGCGGGTCTGAGTCTGAGGTGTAG
back to top