mRNA_E-fasciculatus_F_contig10939.755.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10939.755.1 vs. uniprot
Match: A0A6H5J509_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J509_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.820e-43 Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 1
Query: 19 ESSTVQAFGLLGALSPIIWFACFTAIVIVTNLLLCGGYPPQGRIPLGTRAYLSWWYMNTMLNVWESIGEPWLLDTKLIILVYRCMGAKV 285
ESS ++A GLLGALSPIIWFACFTAIVIVT LLL GGYP Q R+PLGTRAYLSWWYMNTMLN+WESIG WLLDTKLII +YRCMGAK+
Sbjct: 106 ESSKMRALGLLGALSPIIWFACFTAIVIVTKLLLFGGYP-QVRVPLGTRAYLSWWYMNTMLNLWESIGGTWLLDTKLIIFIYRCMGAKI 193
BLAST of mRNA_E-fasciculatus_F_contig10939.755.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.130e-41 Identity = 71/88 (80.68%), Postives = 78/88 (88.64%), Query Frame = 1
Query: 22 SSTVQAFGLLGALSPIIWFACFTAIVIVTNLLLCGGYPPQGRIPLGTRAYLSWWYMNTMLNVWESIGEPWLLDTKLIILVYRCMGAKV 285
SS ++ GLLGALSPIIWFACFTAIVIVT LLL GGYP Q R+PLGTRAYLSWWYMNTMLNVWES+G WLLDTKLII +YRCMGA++
Sbjct: 1338 SSKMRVLGLLGALSPIIWFACFTAIVIVTKLLLIGGYP-QVRVPLGTRAYLSWWYMNTMLNVWESVGGTWLLDTKLIIFIYRCMGAQI 1424
BLAST of mRNA_E-fasciculatus_F_contig10939.755.1 vs. uniprot
Match: D7FH92_ECTSI (Putative peptide synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH92_ECTSI) HSP 1 Score: 146 bits (369), Expect = 7.490e-39 Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 1
Query: 19 ESSTVQAFGLLGALSPIIWFACFTAIVIVTNLLLCGGYPPQGRIPLGTRAYLSWWYMNTMLNVWESIGEPWLLDTKLIILVYRCMGAKV 285
SS V+A GLLGALSP+IWFACFTAIVIVT +LL G PQ R+PLGTRAYLSWWYMN MLNVWE +G WLLDTK+II +YRCMGAK+
Sbjct: 307 SSSKVRALGLLGALSPMIWFACFTAIVIVTKILL--GAHPQERVPLGTRAYLSWWYMNAMLNVWECVGGTWLLDTKMIIFIYRCMGAKI 393
BLAST of mRNA_E-fasciculatus_F_contig10939.755.1 vs. uniprot
Match: D7G4W3_ECTSI (Acyl CoA Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W3_ECTSI) HSP 1 Score: 144 bits (362), Expect = 6.730e-38 Identity = 66/89 (74.16%), Postives = 74/89 (83.15%), Query Frame = 1
Query: 19 ESSTVQAFGLLGALSPIIWFACFTAIVIVTNLLLCGGYPPQGRIPLGTRAYLSWWYMNTMLNVWESIGEPWLLDTKLIILVYRCMGAKV 285
ESS VQA GLLG LSPIIWF CFTAI++VT LLL G P+ R+PLGTRAYLSWWYMNTMLNVWE +G WLLDTKL+I +YR MGAK+
Sbjct: 747 ESSKVQALGLLGVLSPIIWFTCFTAIIVVTKLLL--GAHPEERVPLGTRAYLSWWYMNTMLNVWECVGGAWLLDTKLMIFIYRRMGAKI 833
BLAST of mRNA_E-fasciculatus_F_contig10939.755.1 vs. uniprot
Match: A0A6H5JSY1_9PHAE (Carrier domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY1_9PHAE) HSP 1 Score: 142 bits (357), Expect = 3.180e-37 Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 1
Query: 13 PTESSTVQAFGLLGALSPIIWFACFTAIVIVTNLLLCGGYPPQGRIPLGTRAYLSWWYMNTMLNVWESIGEPWLLDTKLIILVYRCMGAKV 285
P SS V+A GLLGALSPIIWF CFTAIVIVT ++L G PQ R+PLGTRAYLSWWYMN MLNVWE +G LLDTK+II +YRCMGAK+
Sbjct: 752 PGSSSKVRALGLLGALSPIIWFTCFTAIVIVTKIVL--GAHPQERVPLGTRAYLSWWYMNAMLNVWECVGGTCLLDTKMIIFIYRCMGAKI 840
BLAST of mRNA_E-fasciculatus_F_contig10939.755.1 vs. uniprot
Match: A0A6H5L033_9PHAE (Carrier domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L033_9PHAE) HSP 1 Score: 115 bits (287), Expect = 8.820e-28 Identity = 57/89 (64.04%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 19 ESSTVQAFGLLGALSPIIWFACFTAIVIVTNLLLCGGYPPQGRIPLGTRAYLSWWYMNTMLNVWESIGEPWLLDTKLIILVYRCMGAKV 285
+ TV+ GLL AL+PIIWFA FT +VIV L+ G QG IPLGT YLSWWY NTML+VWE+ G WLLDTKL IL YR MGAKV
Sbjct: 558 DDGTVRTPGLLVALAPIIWFASFTVMVIVAKWLVLGRQA-QGCIPLGTHVYLSWWYTNTMLSVWETTGGRWLLDTKLAILFYRMMGAKV 645
BLAST of mRNA_E-fasciculatus_F_contig10939.755.1 vs. uniprot
Match: A0A6H5JSS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS7_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.330e-13 Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 124 GGYPPQGRI----PLGTRAYLSWWYMNTMLNVWESIGEPWLLDTKLIILVYRCMGAKV 285
GGY + + P RAYLSW YMNTMLNVWE +G WLLDTKL+I +YR MGAK+
Sbjct: 45 GGYNKEPWLDSASPSCLRAYLSWCYMNTMLNVWECVGGAWLLDTKLMIFIYRRMGAKI 102
BLAST of mRNA_E-fasciculatus_F_contig10939.755.1 vs. uniprot
Match: A0A7S1YEF2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YEF2_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 7.120e-6 Identity = 20/63 (31.75%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 97 VIVTNLLLCGGYPPQGRIPLGTRAYLSWWYMNTMLNVWESIGEPWLLDTKLIILVYRCMGAKV 285
V++ L+ G Y + +G+ +Y+ WW+++ ++++WE ++LDT L+ L YR +GAK+
Sbjct: 646 VVIAKWLVVGRYRADEQTFVGSISYVRWWFIDRLVHLWEQWVGVFILDTPLLWLFYRMLGAKI 708 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10939.755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10939.755.1 >prot_E-fasciculatus_F_contig10939.755.1 ID=prot_E-fasciculatus_F_contig10939.755.1|Name=mRNA_E-fasciculatus_F_contig10939.755.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=95bp CPCHPTESSTVQAFGLLGALSPIIWFACFTAIVIVTNLLLCGGYPPQGRIback to top mRNA from alignment at E-fasciculatus_F_contig10939:3569..3855+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10939.755.1 ID=mRNA_E-fasciculatus_F_contig10939.755.1|Name=mRNA_E-fasciculatus_F_contig10939.755.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=287bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10939:3569..3855+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10939:3569..3855+ >mRNA_E-fasciculatus_F_contig10939.755.1 ID=mRNA_E-fasciculatus_F_contig10939.755.1|Name=mRNA_E-fasciculatus_F_contig10939.755.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=570bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10939:3569..3855+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |