mRNA_E-fasciculatus_F_contig10938.753.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: D7FS37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS37_ECTSI) HSP 1 Score: 403 bits (1035), Expect = 1.900e-137 Identity = 199/215 (92.56%), Postives = 208/215 (96.74%), Query Frame = 1
Query: 1 MARGTAFLALA-GLMLERSTAVMDVGNEHVCATIGSSAKCWGNNRWGQLGRGDNTTSIGDDPDEMGDNLVAVPVGGTVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGEAADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDGTVSAVAAGCDHTCALMDDGTVMCW 642
MARGTAFLALA GLMLERS AVMDVG+EHVCATIGSSAKCWGNNRWGQLGRGDNTT IGD+PDEMGDNLVAVPVGGTV+E+ALGEDHTCMLLDSG+VVCFGKNDSGQLGLGDTSTRGQIAGDVGEAADLG GLSAVAV GCRHTCGLLDDG+VKCFGYNN+GQLGQGTT+NMGDD GEMGD+LPAVSLDGTVSAVAAGCDHTCALMDDGTVMCW
Sbjct: 1 MARGTAFLALASGLMLERSMAVMDVGDEHVCATIGSSAKCWGNNRWGQLGRGDNTTLIGDEPDEMGDNLVAVPVGGTVAEVALGEDHTCMLLDSGNVVCFGKNDSGQLGLGDTSTRGQIAGDVGEAADLGAGLSAVAVALGCRHTCGLLDDGTVKCFGYNNYGQLGQGTTENMGDDAGEMGDDLPAVSLDGTVSAVAAGCDHTCALMDDGTVMCW 215
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: A0A6H5L2S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S4_9PHAE) HSP 1 Score: 286 bits (732), Expect = 1.330e-95 Identity = 142/158 (89.87%), Postives = 146/158 (92.41%), Query Frame = 1
Query: 169 IGDDPDEMGDNLVAVPVGGTVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGEAADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDGTVSAVAAGCDHTCALMDDGTVMCW 642
+GDDPDEMGDNLVAV VGGTV+EMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGEAADLG GLSAVAV AGCRHTCGLLDDG+VKCFGY GTTDNMGDD GEMGD+LPAVSLDGTVSAVAAGCDHTCALMDDGTVMCW
Sbjct: 2 VGDDPDEMGDNLVAVSVGGTVAEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGEAADLGAGLSAVAVAAGCRHTCGLLDDGTVKCFGYTT------GTTDNMGDDAGEMGDDLPAVSLDGTVSAVAAGCDHTCALMDDGTVMCW 153
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 187 bits (475), Expect = 1.520e-53 Identity = 107/206 (51.94%), Postives = 136/206 (66.02%), Query Frame = 1
Query: 49 RSTAVMDVGNEHVCATIGS-SAKCWGNNRWGQLGRGDNTTSIGDDPDEMGDNLVAVPVGG--TVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGE---AADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDG--TVSAVAAGCDHTCALMDDGTVMCW 642
R+ + VG H CA + + S KCWG N +GQLG GD T+ GD P EMGD L A+ +G T + +++G HTC LLD+G + C+G N GQLGLGDTS+RG G++G+ A LGTG +A A++AG HTC LLD+GSVKC+G N GQLG G T D GEMGD LPAV L T +A++AG HTCAL+D+G V CW
Sbjct: 162 RTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGD-TSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGNGQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCW 366
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO) HSP 1 Score: 193 bits (490), Expect = 4.260e-53 Identity = 109/201 (54.23%), Postives = 137/201 (68.16%), Query Frame = 1
Query: 64 MDVGNEHVCATIGS-SAKCWGNNRWGQLGRGDNTTSIGDDPDEMGDNL--VAVPVGGTVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGE---AADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDG--TVSAVAAGCDHTCALMDDGTVMCW 642
+ G +H CA + + S KCWG N GQLG GD T+ GD P EMGD L VA+ G T + +++G HTC LLD+G V C+G ND G LGLGDTS RG G++G+ A LGTG +A A++AG HTC LLD+GSVKC+G+N FGQLG G T GD GEMGD LPAV+L T +A++AG HTCAL+D+G+V CW
Sbjct: 1512 ISAGFKHTCALLDNGSVKCWGYNYDGQLGLGD-TSPRGDGPGEMGDTLPAVALGTGRTATAISVGSWHTCALLDNGSVKCWGYNDYGYLGLGDTSRRGNELGEMGDRLPAVALGTGRTATAISAGGWHTCALLDNGSVKCWGWNQFGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISAGVLHTCALLDNGSVKCW 1711
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: A0A7C1YL65_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YL65_9ACTN) HSP 1 Score: 184 bits (467), Expect = 1.790e-51 Identity = 102/206 (49.51%), Postives = 132/206 (64.08%), Query Frame = 1
Query: 49 RSTAVMDVGNEHVCATIGS-SAKCWGNNRWGQLGRGDNTTSIGDDPDEMGDNLVAVPV--GGTVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGE---AADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDG--TVSAVAAGCDHTCALMDDGTVMCW 642
R+ + G H CA + + + KCWGNN GQLG+GD S G DP EMGDNL + + GGT + ++ HTC LL +G V C+G N +G LG G T G G++G DLG G +A A+TAG HTC LLD+ +VKC+G N++GQLGQGTTD++GD+ GEMGD LP V L T +A+ AG HTCAL+D+ TV CW
Sbjct: 104 RTATAITAGTNHTCALLDNDTVKCWGNNVLGQLGQGD-ANSRGGDPGEMGDNLPTINLSRGGTATAISTSGVHTCALLHNGTVKCWGYNLNGGLGQGHTDDIGDNPGEMGNNLPPIDLGAGRTATAITAGDSHTCALLDNSTVKCWGDNSYGQLGQGTTDDIGDNPGEMGDNLPPVDLGAGRTATAITAGSFHTCALLDNNTVKCW 308
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: A0A0K1EHP4_CHOCO (Uncharacterized protein n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EHP4_CHOCO) HSP 1 Score: 184 bits (468), Expect = 1.810e-51 Identity = 106/199 (53.27%), Postives = 130/199 (65.33%), Query Frame = 1
Query: 70 VGNEHVCATIGSS-AKCWGNNRWGQLGRGDNTTSIGDDPDEMGDNLVAVPVGG--TVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGEA---ADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDG--TVSAVAAGCDHTCALMDDGTVMCW 642
+G +H CA + KCWG N GQLG GD T GD DEMGD L AV +G TV +A G++HTC LL G V C+G N SGQLGLGDT+ RG G++G+A +LGTG +A+A+ G RHTC LLDDGSVKC+G+N G+LG G T GD GEMGD L AV L T +A++ G H CAL+DDG+V CW
Sbjct: 198 MGYDHACALLHDGRVKCWGRNVQGQLGLGD-TEPRGDAADEMGDALPAVDLGTGVTVVGLAAGDNHTCALLGGGSVKCWGANTSGQLGLGDTAPRGDGPGEMGDALPTVNLGTGRTALAIGGGDRHTCALLDDGSVKCWGFNTGGKLGLGDTAPRGDGPGEMGDALLAVDLGAGRTAAALSVGGSHACALLDDGSVKCW 395
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: A0A3M1N8Z3_9BACT (T9SS C-terminal target domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1N8Z3_9BACT) HSP 1 Score: 176 bits (447), Expect = 4.040e-50 Identity = 98/176 (55.68%), Postives = 118/176 (67.05%), Query Frame = 1
Query: 136 GQLGRGDNTTSIGDDPDEMGDNLVAVPVGG--TVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGE---AADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDG--TVSAVAAGCDHTCALMDDGTVMCW 642
GQLG GD T+ GD P EMGDNL AV +G T + +ALG H+C L D G V C+GKN GQLGLGD + RG G++G+ DLGTG +A A+ AG TC LLDDGSVKC+G ++GQLGQG T + GDD GEMGD LP + L T A+AAG H CAL+DDG+V CW
Sbjct: 2 GQLGLGD-TSDRGDAPGEMGDNLPAVDLGTGRTPTALALGNSHSCALFDDGAVKCWGKNRRGQLGLGDINDRGDAPGEMGDNLPTVDLGTGRTATAIAAGESFTCALLDDGSVKCWGEGDYGQLGQGDTAHRGDDPGEMGDNLPPIDLGAGRTAIAIAAGSFHACALLDDGSVKCW 176
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: A0A7C1YRK2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YRK2_9ACTN) HSP 1 Score: 182 bits (461), Expect = 4.360e-50 Identity = 102/206 (49.51%), Postives = 131/206 (63.59%), Query Frame = 1
Query: 49 RSTAVMDVGNEHVCATIGS-SAKCWGNNRWGQLGRGDNTTSIGDDPDEMGDNLVAVPVGG--TVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGE---AADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDG--TVSAVAAGCDHTCALMDDGTVMCW 642
R+ + G ++ CA + + KCWGNN GQLG+G NT IGD+P EMGDNL AV +G T + ++ G HTC LLD G V C+G G+LG GD + RG AG++G+ +LGTG +A AV+AG HTC LLDDG+VKC+G GQLG G +GD+ GEMGD LP V L T A+AAG +CA++DDG V CW
Sbjct: 169 RTATAIAAGQQYTCALLDDGTVKCWGNNSSGQLGQG-NTDDIGDNPGEMGDNLPAVDLGTGRTATAISAGSSHTCALLDDGTVKCWGSGSFGRLGYGDLTKRGDGAGEMGDNLPPLELGTGRTATAVSAGNTHTCALLDDGTVKCWGGGFNGQLGTGDVTGLGDNPGEMGDNLPPVDLGSGRTAIAIAAGSRASCAVLDDGGVKCW 373
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: A0A381W004_9ZZZZ (Big_5 domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381W004_9ZZZZ) HSP 1 Score: 184 bits (466), Expect = 5.860e-50 Identity = 103/205 (50.24%), Postives = 136/205 (66.34%), Query Frame = 1
Query: 46 ERSTAVMDVGNEHVCATIG-SSAKCWGNNRWGQLGRGDNTTSIGDDPDEMGDNLVAVPVGGTVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGE---AADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDG--TVSAVAAGCDHTCALMDDGTVMCW 642
E S + VGN H C +G SS KCWG N GQLG+G NT++IGD EMG+NL A+ G V E+A+G++H+C+ LD+ V C+G N+ GQLG+ ++S G +G++G A +LGT AV +T G HTC LDD ++KC+GYN FGQLGQG+T N+GD GEM L A++L T VAAG + TCA +DDGTV CW
Sbjct: 590 EFSAVKLAVGNYHSCVNLGYSSVKCWGRNDSGQLGQG-NTSNIGDASSEMGNNLSAIDFDGKVVEVAVGKNHSCVRLDNSSVKCWGDNEFGQLGIDNSSDIGDGSGEMGSNLTAINLGTNKKAVEITTGGDHTCARLDDHTIKCWGYNGFGQLGQGSTSNIGDGSGEM-TSLSAITLPAGRTALQVAAGENFTCARLDDGTVRCW 792
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Match: A0A812SWJ0_9DINO (Herc4 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812SWJ0_9DINO) HSP 1 Score: 182 bits (463), Expect = 8.050e-50 Identity = 109/206 (52.91%), Postives = 129/206 (62.62%), Query Frame = 1
Query: 49 RSTAVMDVGNEHVCATIGS-SAKCWGNNRWGQLGRGDNTTSIGDDPDEMGDNL--VAVPVGGTVSEMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGE---AADLGTGLSAVAVTAGCRHTCGLLDDGSVKCFGYNNFGQLGQGTTDNMGDDEGEMGDELPAVSLDGTVSAV--AAGCDHTCALMDDGTVMCW 642
RS + G H CA + S KCWG N +GQLG G + +GD EMGD L VA+ G + +A G HTC LD G V C+G+N+ GQLGLG T RG + ++G+ A LGTG SAV VTAG HTC LDDGSVKC+G N++G LG GTTDNMGD EMGD LP V+ SAV AAG HTCA +DDGTV CW
Sbjct: 76 RSAVEVTAGELHTCARLDDGSVKCWGYNWYGQLGLGSHDY-MGDGASEMGDYLPPVALGTGRSAVGVAAGYSHTCARLDDGTVKCWGRNNYGQLGLGTTDDRGDGSSEMGDYLPAVALGTGRSAVEVTAGSYHTCARLDDGSVKCWGSNSYGVLGLGTTDNMGDGSNEMGDHLPLVAFGTGRSAVEVAAGKYHTCARLDDGTVKCW 280 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10938.753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10938.753.1 >prot_E-fasciculatus_F_contig10938.753.1 ID=prot_E-fasciculatus_F_contig10938.753.1|Name=mRNA_E-fasciculatus_F_contig10938.753.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=215bp MARGTAFLALAGLMLERSTAVMDVGNEHVCATIGSSAKCWGNNRWGQLGRback to top mRNA from alignment at E-fasciculatus_F_contig10938:2244..4471+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10938.753.1 ID=mRNA_E-fasciculatus_F_contig10938.753.1|Name=mRNA_E-fasciculatus_F_contig10938.753.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2228bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10938:2244..4471+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10938:2244..4471+ >mRNA_E-fasciculatus_F_contig10938.753.1 ID=mRNA_E-fasciculatus_F_contig10938.753.1|Name=mRNA_E-fasciculatus_F_contig10938.753.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1290bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10938:2244..4471+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |