mRNA_E-fasciculatus_F_contig1093.744.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1093.744.1
Unique NamemRNA_E-fasciculatus_F_contig1093.744.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: D8LSD3_ECTSI (Cytochrome b561 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSD3_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 3.510e-168
Identity = 237/247 (95.95%), Postives = 241/247 (97.57%), Query Frame = 1 
Query:    1 MEKVQVRSLWAAHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTGLFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTVLGIQDKNSALGCGYDITLTEPDYNPASHYSNLYAGCRLSNGLGIVVIVTCLCATYAVMPRKPEQPAAALDAPLL 741
            MEK+QVRSLWAAH MSWTALIMVLVWALANQDDDYFLGGLAFSGTGLFNWHPVLMVAGLVVAYTQGILAYRTLSLERE+NK IHNACMF AVILVSLGLIAVFQYHN+ELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTT+LGIQDKNSALGCGYDITLTEPDYNPASHYSNLYAGCRLSNGLGIVVIVTCLCATYAVMPRKPEQ A  LDAPLL
Sbjct:    1 MEKIQVRSLWAAHVMSWTALIMVLVWALANQDDDYFLGGLAFSGTGLFNWHPVLMVAGLVVAYTQGILAYRTLSLEREVNKMIHNACMFTAVILVSLGLIAVFQYHNKELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTLLGIQDKNSALGCGYDITLTEPDYNPASHYSNLYAGCRLSNGLGIVVIVTCLCATYAVMPRKPEQTATVLDAPLL 247
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: A0A7S2UVL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVL7_9STRA)

HSP 1 Score: 176 bits (446), Expect = 7.550e-47
Identity = 94/212 (44.34%), Postives = 127/212 (59.91%), Query Frame = 1 
Query:   10 VQVRSLWAAHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTGLFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTVLGIQDKNSALGCGYDITLTEPDYNPASHYSNLYAGCRLSNGL 645
            VQ   + A H +   A I V  WA  ++D    LGGL       F WHPVLMV G+V+ Y + +L+YR   L +  NK IH     +A   + +GL AVF+ HN+ L ANLY++HSW GI  V LF+  +V GF  F+ G+     K  YLP HV++G+ T+F+A  T   GI +K + LGCGY +T  EPDYNPASHY  + AGC+++N L
Sbjct:   63 VQTYCIRAVHFLCICAAIGVYTWANMSKDLKG-LGGLYNGSASSFAWHPVLMVWGMVICYAEAMLSYRAFPLGKATNKIIHLVLQTLATFFICMGLYAVFKNHNDGLVANLYSLHSWLGIATVVLFFHQWVLGFAAFWLGAASPETKKAYLPVHVYLGVLTFFSAIITVESGITEKLAWLGCGYKVT--EPDYNPASHYDLIPAGCKVANWL 271
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: A0A7S2V225_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V225_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.190e-44
Identity = 91/237 (38.40%), Postives = 131/237 (55.27%), Query Frame = 1 
Query:    1 MEKVQVRSLWAAHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTGLFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQW-MKAQYLPNHVFIGIFTYFAAAFTTVLGIQDKNSALGCGYDITLTEPDYNPASHYSNLYAGCRLSNGLGIVVIVTCLCATYAVMPRKPE 708
            + K Q  SL  +H +      +V+ WA  + D    LGGL   G   F+WHPV MV GL++ +T+ +L+YR+  L +  NK IH     VA++ +  GL AVF+ HNE LYANLY+ HSW G+  + LF   +VGG   F + S P    K  YLP H+ +G+ TY  A      G+ + ++   CGY ++   PD NPASH+  +  GC+ +N L I V+   LCA   V+   P+
Sbjct:   19 INKWQSYSLVLSHILVIVVACLVVGWASMSSDSGG-LGGL--QGGAPFSWHPVCMVFGLIICFTEAMLSYRSFPLGKAANKIIHLTLQTVAIVFLGTGLWAVFKAHNENLYANLYSSHSWLGLTTIVLFVPQWVGGLVAFVSKSAPSAEAKKAYLPLHILVGLLTYLCAVLAVETGLSENSAFSSCGYSVST--PDKNPASHWHLVSPGCKAANALAITVVALALCALATVIDIHPK 250
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: A0A7S3MBE7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBE7_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.800e-36
Identity = 78/217 (35.94%), Postives = 122/217 (56.22%), Query Frame = 1 
Query:   64 MVLVWALANQDDDYFLGGLAFSGTGLFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHN-------EELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTVLGIQDKNSALGCGYDITLTEPDYNPASHYSNLYAGCRLSNGLGIVVIVTCLCATYAVM 693
            MV+ WA  +     +LGG+ +S   +FN+HPV+MV G+ +     +L+YR + L ++I K  H      A++   +GL AV   HN        +  ANLY+MHS  GI  + L+++NY+  FF+F         +A + PNHVF+G+FT  AA      GI +  + LGC Y +T    D+NPA +Y  L  GC+L+NGLG+++++      YA++
Sbjct:   36 MVITWADKHDTSKNYLGGINWSKR-VFNYHPVMMVIGMNLCLITSLLSYRIIELPKKITKVFHAVTHAGAIVCALVGLSAVVTSHNYKDHNGNNKYTANLYSMHSLLGISALVLYFSNYILAFFHFLMPVVSNDARASFKPNHVFLGLFTLIAATIALETGITELTTKLGCIYPVT--SADWNPAENYHELSDGCKLANGLGVMILLGVFLCAYALL 249
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: A0A5C7ING6_9ROSI (Cytochrome b561 domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7ING6_9ROSI)

HSP 1 Score: 134 bits (336), Expect = 5.790e-32
Identity = 69/172 (40.12%), Postives = 103/172 (59.88%), Query Frame = 1 
Query:   31 AAHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTG---LFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTVLGIQDK 537
            AAH ++    IMVLVW L      YF GGLA+  T    +FN HPVLM+ GL++   + I++Y++L L +++ K IH     +A+IL  +G+ A F+YHNE    NLY++HSW GIV++ L+   ++ GF  FF    P  ++++ LP HVF G+F Y  A     +G  +K
Sbjct:   13 AAHVLAIAGAIMVLVWCL------YFRGGLAWKATNKSLIFNLHPVLMLIGLIIIGGEAIISYKSLPLTKQVKKIIHMILHAIALILGIVGICAAFKYHNESSIVNLYSLHSWLGIVIICLYGIQWIYGFVIFFYPGGPTEIRSESLPWHVFFGVFVYVLAVANAAIGFLEK 178
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: V4S8K2_CITCL (Cytochrome b561 domain-containing protein n=5 Tax=Citrus TaxID=2706 RepID=V4S8K2_CITCL)

HSP 1 Score: 128 bits (322), Expect = 4.480e-30
Identity = 68/171 (39.77%), Postives = 101/171 (59.06%), Query Frame = 1 
Query:   34 AHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTG---LFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTVLGIQDK 537
            AHA++  A IMVLVW L       F GGLA+  T    +FN HPVLM+ GL++   + I++Y+ L+L +E+ K IH     +A+IL  +G+ A F+YHNE    NLY++HSW GI V++L+   ++ GF  FF       ++++ LP HV  G+F Y  A     +G  +K
Sbjct:   14 AHAVAIVAAIMVLVWCLG------FRGGLAWEDTNKNLIFNLHPVLMLIGLIIIGGEAIMSYKGLNLRKEVKKVIHLVLHAIALILGIIGIYAAFKYHNESAIVNLYSLHSWLGIAVISLYGIQWLYGFVIFFYPGGSTGLRSESLPWHVLFGLFVYILAVANAAIGFLEK 178
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: A0A2K1YDD1_POPTR (Cytochrome b561 domain-containing protein n=3 Tax=Populus TaxID=3689 RepID=A0A2K1YDD1_POPTR)

HSP 1 Score: 127 bits (319), Expect = 1.030e-29
Identity = 77/217 (35.48%), Postives = 118/217 (54.38%), Query Frame = 1 
Query:   34 AHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTG---LFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTVLGIQDKNSALGCGYDITLTEPD----YNPASHYSNLYAGCRLSNGLGIVVIV 663
            AHA++    + VLVW L      Y+ GGLA+  T    +FN HPVLM+ GL++   + I++Y++L L++E+ K IH     +A+IL S+G+ A F+ HNE   ANLY++HSW GI +++L+   ++ GF  FF       ++++ LP HV  GIF Y  A           N+ALGC   +T  E      Y P +   N  A   +  G  +++ V
Sbjct:   14 AHALAVAGAVTVLVWNL------YYRGGLAWEATNKSLIFNLHPVLMLIGLIIIGGEAIMSYKSLPLKKEVKKVIHLVLHAIAMILGSVGIAAAFKNHNESNIANLYSLHSWLGISIISLYGIQWIYGFIVFFYPGGSAIIRSESLPWHVLFGIFVYILAV---------GNAALGCLEKLTFLESSGIDKYGPEALLVNFTAVITILYGAFVILSV 215
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: UPI001FB0584E (transmembrane ascorbate ferrireductase 1-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0584E)

HSP 1 Score: 126 bits (317), Expect = 3.570e-29
Identity = 67/171 (39.18%), Postives = 101/171 (59.06%), Query Frame = 1 
Query:   34 AHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTG---LFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTVLGIQDK 537
            AH ++    +MVLVW +      +F GGLA+  T    +FN HPVLM+ GL++   + I++YR L+L++E  K IH     +A++L  +G+ A F+YHNE   ANLY+ HSW G+VV+ L+   ++ GF  FF       +KA+ LP H+ +G F +  A  T  LG  +K
Sbjct:   31 AHVLAVAGTVMVLVWCI------HFRGGLAWESTNKALIFNIHPVLMLIGLIILGGEAIMSYRALALKKETKKLIHLLLHGIALMLGIIGIYAAFKYHNESNIANLYSSHSWFGLVVIILYGLQWIYGFVVFFYPGAATGIKAESLPWHMLVGSFVFLLAVSTAALGFLEK 195
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: A5C961_VITVI (Cytochrome b561 domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5C961_VITVI)

HSP 1 Score: 125 bits (315), Expect = 4.010e-29
Identity = 68/171 (39.77%), Postives = 100/171 (58.48%), Query Frame = 1 
Query:   34 AHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTG---LFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTVLGIQDK 537
            AHA++    +MVLVW +      YFLGGLA+  T    +FN HPVLM+ GLV+   Q I++Y++L L +E+ K IH     +A+IL  +G+ A F+ HNE   ANLY++HSW GIV+++L+   ++ GF  FF       +++  LP HV  G+  Y        LG  +K
Sbjct:   14 AHALAVAGAVMVLVWCI------YFLGGLAWEATNKALIFNLHPVLMLIGLVIIGGQAIMSYKSLPLRKEVKKVIHLVLHAIALILGIIGIYAAFKNHNESGIANLYSLHSWLGIVLISLYGIQWIYGFLVFFYPGGTLGLRSASLPWHVLFGLLVYVLVVGNAELGFLEK 178
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BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Match: A0A1S2Y0J4_CICAR (transmembrane ascorbate ferrireductase 1 isoform X1 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2Y0J4_CICAR)

HSP 1 Score: 124 bits (312), Expect = 9.970e-29
Identity = 80/237 (33.76%), Postives = 127/237 (53.59%), Query Frame = 1 
Query:   28 WAAHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTG---LFNWHPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLIAVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMKAQYLPNHVFIGIFTYFAAAFTTVLGIQDKNSALGCGYDITLTEPDYNPASHYSNLYAGCRLSNGLGIVVIVTCLCATYAVMPRKPEQPAAALD 729
            +  H +   A+++VL+W L      +F GGLA++ +    +FN HPVLM+ GL++   + I++Y++L L++E+ K IH     +A+IL  +G+ A F+ HNE   ANLY++HSW GI V++L+   ++ GF  FF       ++ + LP HV IG+F Y  A  T  LG  +K           LT  + +  + Y +      L N      ++T L  T+ V+    E PAAA D
Sbjct:   12 YGVHLLGLVAIVLVLLWNL------HFRGGLAWNSSNKALIFNLHPVLMLIGLIIFGGEAIISYKSLPLKKEVKKLIHLILHAIALILGIVGISAAFKNHNESGIANLYSLHSWLGIGVISLYGVQWIFGFVVFFYPGGTSSIRRESLPWHVLIGLFVYILAIGTASLGFLEK-----------LTFLENSGLAKYGS---EALLVN---FTALITILFGTFVVLSAISEAPAAAED 225
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1093.744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSD3_ECTSI3.510e-16895.95Cytochrome b561 domain-containing protein n=2 Tax=... [more]
A0A7S2UVL7_9STRA7.550e-4744.34Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2V225_9STRA2.190e-4438.40Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3MBE7_9STRA3.800e-3635.94Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A5C7ING6_9ROSI5.790e-3240.12Cytochrome b561 domain-containing protein n=1 Tax=... [more]
V4S8K2_CITCL4.480e-3039.77Cytochrome b561 domain-containing protein n=5 Tax=... [more]
A0A2K1YDD1_POPTR1.030e-2935.48Cytochrome b561 domain-containing protein n=3 Tax=... [more]
UPI001FB0584E3.570e-2939.18transmembrane ascorbate ferrireductase 1-like n=1 ... [more]
A5C961_VITVI4.010e-2939.77Cytochrome b561 domain-containing protein n=2 Tax=... [more]
A0A1S2Y0J4_CICAR9.970e-2933.76transmembrane ascorbate ferrireductase 1 isoform X... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1093contigE-fasciculatus_F_contig1093:8212..13228 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score492.3
Seed ortholog evalue1.4e-136
Seed eggNOG ortholog2880.D8LSD3
Preferred nameCYBRD1
KEGG rclassRC00467
KEGG koko:K01183,ko:K08360,ko:K08370,ko:K10706,ko:K16295,ko:K18749
KEGG TC5.B.2.1
KEGG ReactionR01206,R02334
KEGG Pathwayko00520,ko01100,ko04978,map00520,map01100,map04978
GOsGO:0000293,GO:0000323,GO:0001505,GO:0003008,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005903,GO:0006091,GO:0006873,GO:0006875,GO:0006879,GO:0007610,GO:0007611,GO:0007613,GO:0007626,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009987,GO:0010008,GO:0010035,GO:0010038,GO:0010039,GO:0010646,GO:0012505,GO:0012506,GO:0016020,GO:0016021,GO:0016491,GO:0016722,GO:0016723,GO:0019725,GO:0019904,GO:0022900,GO:0023051,GO:0030003,GO:0030133,GO:0030658,GO:0030659,GO:0031090,GO:0031224,GO:0031253,GO:0031410,GO:0031526,GO:0031902,GO:0031982,GO:0032501,GO:0032879,GO:0042221,GO:0042592,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0046916,GO:0046928,GO:0048167,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050804,GO:0050877,GO:0050890,GO:0050896,GO:0051046,GO:0051049,GO:0051588,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0060341,GO:0065007,GO:0065008,GO:0071944,GO:0097708,GO:0098588,GO:0098590,GO:0098771,GO:0098805,GO:0098852,GO:0098862,GO:0099177,GO:0120025,GO:0120038,GO:1903530
EggNOG free text desc.oxidation-reduction process
EggNOG OGsKOG1619@1,KOG1619@2759
EC1.16.5.1,3.2.1.14
COG Functional cat.U
CAZyGH18
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03019,ko03021
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionCytochrome b561/ferric reductase transmembrane
Ec32 orthologEc-21_003260.1
Exons6
Model size1975
Cds size744
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927593.2036805-UTR-E-fasciculatus_F_contig1093:8211..94421622927593.2036805-UTR-E-fasciculatus_F_contig1093:8211..9442Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1093 8212..9442 -
1695995611.4325209-UTR-E-fasciculatus_F_contig1093:8211..94421695995611.4325209-UTR-E-fasciculatus_F_contig1093:8211..9442Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1093 8212..9442 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927593.3827035-CDS-E-fasciculatus_F_contig1093:9442..95401622927593.3827035-CDS-E-fasciculatus_F_contig1093:9442..9540Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 9443..9540 -
1695995611.4559798-CDS-E-fasciculatus_F_contig1093:9442..95401695995611.4559798-CDS-E-fasciculatus_F_contig1093:9442..9540Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 9443..9540 -
1622927593.3944168-CDS-E-fasciculatus_F_contig1093:9971..101731622927593.3944168-CDS-E-fasciculatus_F_contig1093:9971..10173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 9972..10173 -
1695995611.4760003-CDS-E-fasciculatus_F_contig1093:9971..101731695995611.4760003-CDS-E-fasciculatus_F_contig1093:9971..10173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 9972..10173 -
1622927593.4090796-CDS-E-fasciculatus_F_contig1093:10648..107801622927593.4090796-CDS-E-fasciculatus_F_contig1093:10648..10780Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 10649..10780 -
1695995611.4895725-CDS-E-fasciculatus_F_contig1093:10648..107801695995611.4895725-CDS-E-fasciculatus_F_contig1093:10648..10780Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 10649..10780 -
1622927593.4213815-CDS-E-fasciculatus_F_contig1093:11191..113071622927593.4213815-CDS-E-fasciculatus_F_contig1093:11191..11307Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 11192..11307 -
1695995611.4990098-CDS-E-fasciculatus_F_contig1093:11191..113071695995611.4990098-CDS-E-fasciculatus_F_contig1093:11191..11307Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 11192..11307 -
1622927593.4340723-CDS-E-fasciculatus_F_contig1093:12758..128611622927593.4340723-CDS-E-fasciculatus_F_contig1093:12758..12861Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 12759..12861 -
1695995611.5074995-CDS-E-fasciculatus_F_contig1093:12758..128611695995611.5074995-CDS-E-fasciculatus_F_contig1093:12758..12861Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 12759..12861 -
1622927593.4813833-CDS-E-fasciculatus_F_contig1093:13135..132281622927593.4813833-CDS-E-fasciculatus_F_contig1093:13135..13228Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 13136..13228 -
1695995611.5171275-CDS-E-fasciculatus_F_contig1093:13135..132281695995611.5171275-CDS-E-fasciculatus_F_contig1093:13135..13228Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1093 13136..13228 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1093.744.1prot_E-fasciculatus_F_contig1093.744.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1093 9443..13228 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1093.744.1

>prot_E-fasciculatus_F_contig1093.744.1 ID=prot_E-fasciculatus_F_contig1093.744.1|Name=mRNA_E-fasciculatus_F_contig1093.744.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=248bp
MEKVQVRSLWAAHAMSWTALIMVLVWALANQDDDYFLGGLAFSGTGLFNW
HPVLMVAGLVVAYTQGILAYRTLSLEREINKKIHNACMFVAVILVSLGLI
AVFQYHNEELYANLYTMHSWAGIVVVTLFYANYVGGFFNFFTGSTPQWMK
AQYLPNHVFIGIFTYFAAAFTTVLGIQDKNSALGCGYDITLTEPDYNPAS
HYSNLYAGCRLSNGLGIVVIVTCLCATYAVMPRKPEQPAAALDAPLL*
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mRNA from alignment at E-fasciculatus_F_contig1093:8212..13228-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1093.744.1 ID=mRNA_E-fasciculatus_F_contig1093.744.1|Name=mRNA_E-fasciculatus_F_contig1093.744.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5017bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1093:8212..13228- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAAAAAGTACAGGTTCGCAGCCTTTGGGCTGCCCATGCGATGTCGTG
GACGGCTCTTATCATGGTTCTCGTCTGGGCACTGGCTAATCAGGTACGGA
TGCAACAGCAGCAGCAGTAAATATAGTGCCGACGCAGCACAGCAGGTTGC
AGCACTCACATCGCCGTCTTTTTGCGGGCATTGAAGGTCGTCGCTGAGCA
CAGAGCGAGGAGTCAGAATCAGCAATAGCGCACACTATTCCTGTGTGTCT
AGCTGGCACGCATGTACTCATTGCAGGGGGTGCACCTTTGCTCCGGGATC
CGCATAGGTGTATCCAAGCCTTTATTATATGACGCTCATAGAATATCGCC
GTTCCTACTGCTGTAAGGACGACGACTACTTCCTCGGCGGTCTGGCGTTC
AGTGGGACAGGGCTCTTCAACTGGCACCCGGTTCTGATGGTCGCTGGACT
GGTCGTTGCCTACACTCAAGGTTAGACGAGCCGTGTTTCGTTGTTTTCTG
TCAACAACGACGCAAACAAAAGCGAAAGCGGTGCAGAAACTTACCGTGAT
CCACGATGGGCGCCTCCCTTTTTGCCCGAACCTTACATGTACAACACAAC
AGAGAGAGATACAGGGCCTGCCCCCCAAACACAACCTTTCAGCTCTGGCT
TAGATGTACACGAAAATTCTCGCGGTTGAGGTCACTTCGAGAAACCTTGG
CTACTATTCTGGTGGTTGCCGGATACATTTGAATATGTGCAGCTAGTAAT
TGCCGGAAGTGGCAATGGGACACCACCGAGGTAACGAGGCTGCCTTCTCT
AGCGTCGCGCTACGGTCCAATGTTCTCTTGGTGGGATGTTTGGTGTGCAG
CACACACAGGCCCAACCACTGGTGACAGAGGCAGAACGGGATACAATGGG
TGTTGTGAAAGAGTGGGCAGCCGGCCTGCCGTATTTGTACTCGGGTTTGG
CTTGTCCCTCTGGCTGAAAATCTGCGGCAACAGCCCGACGGCAACCTCAG
ACATGTCATGCCGCATGTCACCATCGTTATGAAACATTTAGTCGTGGGCC
CTATAAGGTCGCGTGGTCGGTATAGGGCGGATGAACTATGTTCGAGGCGC
TTTGCCGCCCTCAGCGGCTGGTATCGAAGCTGGGTGCTATGTTATCCCAG
GAACAGCAGATGACGAAATGTAACCATGTACTGGAGTATTATATATCCTT
CACTCAAGCCCCTCAGGCAAGCTTCCACTACCTACGACATGAAGTGCTCG
CCCCTCAGGCGAGTGTTATCCGTACACGCAAGCCCCTCAGGCAAGCTAGT
CTCATACACGCAAGCCCCTCAGGCAAGTACCAGGAGCACCCCGCTGTGTG
CTCCCGGGGGCCCCACACAACCGCATACATACCGATCACCCCACACTTCC
CATACGCGTATCCCCCACAGAGGATGCACAGATCGGACTCATATCCAAGT
ACCGCAAACAAACTATCTTGGCACCCCAGATCAATCACGCTGTTTATAAA
CCGGAGTACTTTGAATAGGGCGAATGCCCGAAAATACAGGTATATGTGGC
ATGGCACTACCCTCTCTGTACAGGATCCACGAGAGACAACAATCATGCCT
TGATGTCCATTTGTGGGATAACTTGAGCGTTGGCCTAGCACCAAACGCTG
ATCTTGGCTTTGCCCCATGGTTTGGTAGCCTCTCCCAAAGACACAGGCCG
TTCTTCGATTGTTCTCAAGAGAGAGGGCCGGCAATCGGCCGTTCTCTCTC
GACATAGGTGACGTCATACCCCGTTGATCTCTGTCTGTCTGTCACACACA
CACACACACACCTCTCTCTCTCTCTGTCTCTCGCACTGTGTTTGTCTTTC
TCTCTCTCGGTCTCTTCTCTTCCTCTCTCTTGCTTCTCTCGTTCGCCCCT
CATGTCCCTCTCTCATTGAAGGTATCTTGGCGTACCGGACGCTGTCGTTG
GAAAGAGAAATCAACAAAAAGATCCACAATGCGTGCATGTTCGTGGCGGT
CATTCTCGTTTCACTGGGCCTGATCGCGGTTTTTCAGGTACGGGTGGTGT
GCCATTATTTTCTACCGTTTCTTTCGCCAACCAGAATTATAGTTATTTAA
CAGCAGTGTTTACCTTCCTCCTGTATGACCCCGATTGGTGCGTCCATCAA
AGGTGTAGACTGGCGCCACACAGTAGATGGGGCGACACCACACACATGCA
GGCATGCAGGTCTGCGCAGGTCAGGACTGACGTGTCTCACAGTTTGTGCG
TGAATCCTGCACAGGTACCGTGTTCTTGGTACTCCCGGAGAGAAGACCAC
TTGGGGGCACCGCCCTGGTGTTTTATCTCCGTCCAACATGGAAAAAAAAA
CGGAGTGTCGTATGTCGGTAGCACATTCCGGGTGGTACCTGTGTCTCGTC
TAGAACCCCTGTTTCCCATGCTCTCCCTCCGTCCTGCCCACTCGCCAGTA
CCACAACGAAGAGCTGTACGCAAACCTGTACACGATGCATAGTTGGGCGG
GCATCGTGGTGGTCACGCTGTTCTACGCCAACTACGTCGGCGGATTTTTC
AACTTCTTCACTGGATCGACGCCGCAGTGGGTAAGGGGGACACAGCGAGT
GCTCTTGTTGTGAGATGAGTTAATTTGATCTCGTGGCAGCAAGTAGGTAG
CAACATCAAAGGCGGCGTTCGGGGGGCGAAGTACTATACGGGGTTGTTGG
CATTTTAGTGGTTTTTGCCGTTCCAGCGCCTGAAAGACAGCGATTCTAGA
ACACCCGACGGATTCGTGTGACGACGCTACCCCAGCAGACTACCGAGTGC
ATCTTACGCGTATTGCACATTGCATGCGATGAGTAGCACTCCTTCTTGTG
ACTTGGCCTCCCACCAACCATCGCGCTCATCGGAAAGCTCTGTGGCCCAG
TGTACGCGCCCTGCCGAGTACGTCTTGAGTTGTCTCTGAAGCCCCTCCAA
GCACGTGAACGCGGCCGTGGCTATAACACTGACCGCTCGCTTCGATATCG
GAACGCCGTGTGTACGCTGTACACCCACGTTTCTCTCGACTGGTGTTTTT
GGCAGATGAAGGCCCAGTACCTGCCAAACCACGTCTTCATCGGAATCTTC
ACGTACTTCGCGGCGGCGTTCACGACGGTTCTCGGTATCCAGGACAAGAA
TTCCGCGCTCGGCTGCGGCTACGACATCACGCTCACGGAGCCGGACTACA
ACCCGGCTTCCCACTACTCCAACCTGTACGCGGGCTGCCGTCTCAGCAAC
GGGCTAGGTGTGTGACAGAACGCTTTCGACTTGGTGCCTATAGGCATTTT
TCTATTTCGGTACCATCATCCCATGACATGGCACAACATCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTATTTCGAATACGTACAAGAATCCAGTC
ACGTCTGATGCGAATGCCGTAGCGCTCGTGTCCACCGTATGCATGTCTCT
TGTGCCTCTCAATGGGTATGTTTGGTGAATTGGGTGCCAGCAGACACAAG
AACCTCCTTGCCATGTTATGTGATGTGGAACGCCTCTGTTTTCTTTAAGT
TTTTTTTCGCAACCAAGACACGCCAACCCTTCCTGCGTAGCATCGACTTG
GCGAATCAAGTTCTGAACTCAGTGCCCTGATACCGTGCCCCCCTGCCCCG
CGTTGTTTTTTTGTGCTTGACGTCGCGTCGTCTTCTAGGTATCGTGGTCA
TCGTCACCTGTCTCTGCGCCACATACGCTGTTATGCCTCGGAAACCCGAA
CAACCCGCTGCGGCGCTTGATGCGCCGCTTCTTTGAAGCCGCGTAGGTGT
GGATTGTAGTCAGCGAGAGGTGCGCGCAAAACTAGAGGTTTTGCATTGTG
CCCACCAATCGCCCACGTGAAAGAAACACTACTTTCGTACCCTGCATAGA
TTAAGTTTACGTTGCTTGTTGCGTTCATCGTATTTTTTAACGATAGGCGG
AAAGACACGTACAAGGAGAGAACAGAGATTGAGAGAGAAGCAGGGATTTG
CCGTGTGTGTGTTCCTTTCTGCTCTGTGTTTTGCAGCATGGCGTGTGCTT
CCGATACATCAAGGAGTGCAAACTATCCAAGCCACTGTACACAAATCACG
TATCACATCGGTATGTGTTGTATGCTGCTCGCGCTACCACACCCTCCCTG
GGATTCATCCCACTCCGGCGTCTGCTGCCACCGTCTGCCCGTTGTATTTT
TTGGGGGGGGGTCGTAGACGGCAGGGTCTGACGTTCGCATGGGTGCCCTT
AGTTAGTGTCACAGCCGTCCCGTCGCAAAGCGTACGTGGTTGACGCGTGT
TGTATATTTTGCTTACCTTCACAAGTACGAAAATAATGTTGGGTAAGGCG
TCCAGACGGGAAATTGTCGGTGATGTCATAGGAGCCAGCTGGTCGATGGC
TGTTTGTCTATTTGCGTGTGTCAACTGGTCCTTGCTGCTGTTTGTAGGCT
TGGTGCACAGCGCTTGATTGAAGCGGTACTTGTTGACTAACGTTGTGCCG
AAGTGTGGAGATGAGCTGTGATACGGGTCACGTCTTCCCAACAGCTGTCG
AGGACAATTCCCTCTTTCTCAAAGGTTGCTAATATGCGCTTCCTATTCCT
ACAGCCGCACTTTCTGACGTGGGTGCCTGCGGAGAAATTTCGATGATGTT
CCACAGGATGTGATAGTTTTGGGACACACATTGGAGCATCCAACCCAAAA
CATCGAACGGCTGACGCGTTTTGTGTCGAGCGTTTTGGTTTTTGTGGGTT
GCGGGCGAACCTAAACCTCCACTGGGGCGGGTGTGATCTGGCGGTGTATT
CGAAACGACCGTGTGTCGGGACCACCCCTTCCAGCCACCATTTCTCCGAT
CGACGCGGTTCTCGAGGCTGATGTTTTGGCGGATGTTGTATGACGCTGAT
TGAAGAGTTTGGTTCGCTTTGTCGCGCGGCTGTACATCTCACGGGGAAGT
CATGGAGTTGCGCCAGGCGGGCGATCGCCACGAACCACGAAGGAAGCGCG
TTTTCAGCTCCTCGGCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1093:8212..13228-

>mRNA_E-fasciculatus_F_contig1093.744.1 ID=mRNA_E-fasciculatus_F_contig1093.744.1|Name=mRNA_E-fasciculatus_F_contig1093.744.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1488bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1093:8212..13228- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAAAAAGTACAGGTTCGCAGCCTTTGGGCTGCCCATGCGATGTCGTG
GACGGCTCTTATCATGGTTCTCGTCTGGGCACTGGCTAATCAGATGGAAA
AAGTACAGGTTCGCAGCCTTTGGGCTGCCCATGCGATGTCGTGGACGGCT
CTTATCATGGTTCTCGTCTGGGCACTGGCTAATCAGGACGACGACTACTT
CCTCGGCGGTCTGGCGTTCAGTGGGACAGGGCTCTTCAACTGGCACCCGG
TTCTGATGGTCGCTGGACTGGTCGTTGCCTACACTCAAGGACGACGACTA
CTTCCTCGGCGGTCTGGCGTTCAGTGGGACAGGGCTCTTCAACTGGCACC
CGGTTCTGATGGTCGCTGGACTGGTCGTTGCCTACACTCAAGGTATCTTG
GCGTACCGGACGCTGTCGTTGGAAAGAGAAATCAACAAAAAGATCCACAA
TGCGTGCATGTTCGTGGCGGTCATTCTCGTTTCACTGGGCCTGATCGCGG
TTTTTCAGGTATCTTGGCGTACCGGACGCTGTCGTTGGAAAGAGAAATCA
ACAAAAAGATCCACAATGCGTGCATGTTCGTGGCGGTCATTCTCGTTTCA
CTGGGCCTGATCGCGGTTTTTCAGTACCACAACGAAGAGCTGTACGCAAA
CCTGTACACGATGCATAGTTGGGCGGGCATCGTGGTGGTCACGCTGTTCT
ACGCCAACTACGTCGGCGGATTTTTCAACTTCTTCACTGGATCGACGCCG
CAGTGGTACCACAACGAAGAGCTGTACGCAAACCTGTACACGATGCATAG
TTGGGCGGGCATCGTGGTGGTCACGCTGTTCTACGCCAACTACGTCGGCG
GATTTTTCAACTTCTTCACTGGATCGACGCCGCAGTGGATGAAGGCCCAG
TACCTGCCAAACCACGTCTTCATCGGAATCTTCACGTACTTCGCGGCGGC
GTTCACGACGGTTCTCGGTATCCAGGACAAGAATTCCGCGCTCGGCTGCG
GCTACGACATCACGCTCACGGAGCCGGACTACAACCCGGCTTCCCACTAC
TCCAACCTGTACGCGGGCTGCCGTCTCAGCAACGGGCTAGATGAAGGCCC
AGTACCTGCCAAACCACGTCTTCATCGGAATCTTCACGTACTTCGCGGCG
GCGTTCACGACGGTTCTCGGTATCCAGGACAAGAATTCCGCGCTCGGCTG
CGGCTACGACATCACGCTCACGGAGCCGGACTACAACCCGGCTTCCCACT
ACTCCAACCTGTACGCGGGCTGCCGTCTCAGCAACGGGCTAGGTATCGTG
GTCATCGTCACCTGTCTCTGCGCCACATACGCTGTTATGCCTCGGAAACC
CGAACAACCCGCTGCGGCGCTTGATGCGCCGCTTCTTTGAGTATCGTGGT
CATCGTCACCTGTCTCTGCGCCACATACGCTGTTATGCCTCGGAAACCCG
AACAACCCGCTGCGGCGCTTGATGCGCCGCTTCTTTGA
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