mRNA_E-fasciculatus_F_contig1091.731.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1091.731.1 vs. uniprot
Match: A0A6H5K4C0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4C0_9PHAE) HSP 1 Score: 486 bits (1252), Expect = 5.300e-169 Identity = 253/273 (92.67%), Postives = 261/273 (95.60%), Query Frame = 1
Query: 4 ASTVSTIRPEMSRVRAASPSRGSARMLAGQEFATCSEADFRAYIIGWTFVWSGIIPYTFIASKASWLDPTNVLGAVIGFKSLSTVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDVQNKKGGVMSDYLFRNTFKENLRRSKFKGWPAGPDGQPALKDAFGGDVKAVTRTMAKRELSESAMNAVFDSFVGSPLSLVADRFKVDNQLDNWRKDNTFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQPIIIRYGNPLEFLGF 822
AS VST R EM+RVRAASPSRGSARMLAGQ+FATCSEADFRAYIIGWTFVWSGIIPYTFIASKA NVLG VIGFK+ STVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDVQ+KKGGVMSDYLFRNTFKENLRRSKFKGWPAGPDGQPALKDAFGGDVKAV+RTMAKRELS++AM+AVFDSFVGSPLSLVADRFKVDNQLDNWRKDNTFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQPIIIRYGNPL FLGF
Sbjct: 45 ASIVSTTRSEMNRVRAASPSRGSARMLAGQDFATCSEADFRAYIIGWTFVWSGIIPYTFIASKAI----QNVLGEVIGFKARSTVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDVQDKKGGVMSDYLFRNTFKENLRRSKFKGWPAGPDGQPALKDAFGGDVKAVSRTMAKRELSDTAMDAVFDSFVGSPLSLVADRFKVDNQLDNWRKDNTFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQPIIIRYGNPLAFLGF 313
BLAST of mRNA_E-fasciculatus_F_contig1091.731.1 vs. uniprot
Match: A0A835YTS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS8_9STRA) HSP 1 Score: 160 bits (406), Expect = 7.340e-43 Identity = 92/229 (40.17%), Postives = 140/229 (61.14%), Query Frame = 1
Query: 118 DFRAYIIGWTFVWSGIIPYTFIASKASWLDPTNVLGAVIGFKSLSTVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDVQN--KKGGVMSDYLFRNTFKENLRRSKFKGWPAGPDGQPALKDAFGGDVKAVTRTMAKRELSESAMNAVFDSFVGSPLSLVADRFKVDNQLDNWRKD-NTFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQPIIIRY 795
+F + + GI+PYT +A+K+ + D V GF++L VK GE+ T+SNQ LLLY +PI+L+D++NIV RF++FD++Q+ + G S+YL R FK+ + K WPA +G P +D F A T+ +E+ +SA++ VFD F GS + +ADRFKV+ LD+WR D +F++ FE+ LLV R LF L+ L LA + VFF+ P+ +R+
Sbjct: 13 EFNTVVGFMALAFQGILPYTIMANKSIFSD-------VGGFRALPAVKTGEEVTVSNQPLLLYGEPIRLIDVINIVSRFESFDELQDELRDDGNRSNYLRREYFKQKVLTLAPKAWPADENGVPVGQDMFASTSVA---TLKNKEIRDSALDVVFDVFSGSSRAYIADRFKVEYNLDSWRPDARSFNVAAFEKDLLVTRYSILFIYAVLLLLQLACWSVFFINPLALRF 231
BLAST of mRNA_E-fasciculatus_F_contig1091.731.1 vs. uniprot
Match: A0A7S2USE2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USE2_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.520e-20 Identity = 59/159 (37.11%), Postives = 85/159 (53.46%), Query Frame = 1
Query: 244 SLSTVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDV--QNKKGGVMSDYLFRNTFKENLRRSKFKGWPAGPDGQPALKDAFGG-DVKAVTRTMAKRELSESAMNAVFDSFVGSPLSLVADRFKVDNQLDNWRKDNTFDIKGFEQGLLVGRLL 711
+L + + E T+ N LL Y + +KLLD+VN+VGRFQ +D V Q G + L R FK+ +R+ KFK WP GQ F D + + ELSE A++AVFD+F + S +R K + Q WR+ + FD++ FE LL L+
Sbjct: 67 ALMFMSDAESLTVKNNGLLKYGEDVKLLDVVNVVGRFQGWDGVWEQPPPGTFFASGLSRERFKDKVRKEKFKSWPKDSSGQSVAAKLFPELDGPKGVKQVDSMELSEVALDAVFDTF--NSASSHTERRKAEEQFAQWRQGDVFDVEAFESNLLKANLI 223
BLAST of mRNA_E-fasciculatus_F_contig1091.731.1 vs. uniprot
Match: A0A7S0KA49_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KA49_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.850e-14 Identity = 70/239 (29.29%), Postives = 111/239 (46.44%), Query Frame = 1
Query: 148 FVWSGIIPYTFIASKASWLDPTNVLGAVIGFKS---------LSTVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDVQN-------KKGGVMSD-----YLFRNTFKENLRRSKFKGWPAGPD-----GQPALKDAFGGDVKAVTRTMAKRE--LSESAMNAVFDSFVGSPLSLVADRFKVDNQLDNWRKDNTFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQP 780
F+ G+IP A+K +LG ++G ++ +ST I N LL ++P+KL D+V IVGR + V + K+ ++ +L R FK+N+R +KF GWP P G LK F R ++K+ + + A++AVFD++ S +A KVD QL WR +N FD+ F + GR + I++ + + + YG FV P
Sbjct: 82 FLGGGLIPPAIAANKL-------MLGTILGQRAGGDDDSVAKVSTSASSVSPDIPNSKLLFAREPVKLADVVAIVGRIRDVQSVADWKNLPSAKRDNLIDPENPPMWLPRGMFKDNIRNAKFVGWPVDPSTGEVVGGIELKSEF-------EREVSKKSYPIPDVALDAVFDTWAWG--SGIATPDKVDVQLQAWRSNNGFDLNKFASAAVAGRSVTGAAILTFITIQVMVYGCLFVAP 304
BLAST of mRNA_E-fasciculatus_F_contig1091.731.1 vs. uniprot
Match: A0A7S1BLB2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLB2_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.930e-11 Identity = 57/196 (29.08%), Postives = 104/196 (53.06%), Query Frame = 1
Query: 277 TISNQSLLLYKDPIKLLDIVNIVGRFQTFDDV-------QNKKGGVMSD----YLFRNTFKENLRRSKFKGWPAGPDGQPALKDAFGGDVKAVTRTMAKR---ELSESAMNAVFDSF-VGSPLSLVADRFKVDNQLDNWRKDN-TFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQPII-IRYGNPLEF 813
T+S LL +P+KL+D++ ++GR +DV K V S+ +L RNT+K N+R +K++GWP DG P GG+++ ++ E+S++A++ VFD++ +G+ VA KV L ++ K N TFD+ F+ ++GR + I+ + + + +G F+ P + + +G + F
Sbjct: 157 TLSCSPLLFSGEPVKLVDVLAVIGRISDVNDVARWSDLPSTKLPNVSSNNPPQWLPRNTYKVNIRAAKWRGWPVNADGSPI----GGGELQRSEEKRLRQKGAEISDAALDVVFDTWALGAG---VATPDKVSEALSSYLKSNGTFDLGKFQSAAVLGRAVTAAAILFFLVIQVIAFGTLFIAPFLRVFFGIDIGF 345
BLAST of mRNA_E-fasciculatus_F_contig1091.731.1 vs. uniprot
Match: A0A7S0G8A2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8A2_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.750e-7 Identity = 64/227 (28.19%), Postives = 107/227 (47.14%), Query Frame = 1
Query: 133 IIGWTFVWSGIIPYTFIASKASW--LDPTNVLGAVIGFKSLSTVKEGEDA-----TISNQSLLLYKDPIKLLDIVNIVGRFQTFDDV------------QNKK----GGV---MSD-----YLFRNTFKENLRRSKFKGWPA-GPDGQPALKDAFGGDVKAVTRTMAKRE---LSESAMNAVFDSFVGSPLSLVADRFKVDNQLDNWRKDN-TFDIKGFEQGLLVGR 705
++ +T+++ G+IP A+K+ L G KSLS E + T+ +L+ + I L+D++ +VGR V +KK GG+ +D +L R FKEN+R SKF GWP G G+P G +++ + ++ + ++A++AVFDS+ + VA + KV QL +WR TFD++ F ++GR
Sbjct: 111 LVIFTWLFGGLIPALISANKSMMGTLSGKRRGGEDSTDKSLSINNYIESSGATGPTLPQSALMFPSEDIPLVDVIAVVGRLNDASGVCDWENLPSTKYVPSKKYTPAGGIDLRTADGNPIMWLPRAIFKENVRNSKFLGWPTDGRTGEPV----GGSELEQFEKGRISKKGALIGDAALDAVFDSWANG--ASVATKDKVSKQLSSWRDSGKTFDLQSFTTAAIIGR 331 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1091.731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1091.731.1 >prot_E-fasciculatus_F_contig1091.731.1 ID=prot_E-fasciculatus_F_contig1091.731.1|Name=mRNA_E-fasciculatus_F_contig1091.731.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=264bp MSRVRAASPSRGSARMLAGQEFATCSEADFRAYIIGWTFVWSGIIPYTFIback to top mRNA from alignment at E-fasciculatus_F_contig1091:4403..8116- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1091.731.1 ID=mRNA_E-fasciculatus_F_contig1091.731.1|Name=mRNA_E-fasciculatus_F_contig1091.731.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3714bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1091:4403..8116- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1091:4403..8116- >mRNA_E-fasciculatus_F_contig1091.731.1 ID=mRNA_E-fasciculatus_F_contig1091.731.1|Name=mRNA_E-fasciculatus_F_contig1091.731.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1584bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1091:4403..8116- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |