mRNA_E-fasciculatus_F_contig108.642.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: D7FVB8_ECTSI (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB8_ECTSI) HSP 1 Score: 794 bits (2051), Expect = 1.700e-281 Identity = 427/488 (87.50%), Postives = 443/488 (90.78%), Query Frame = 1
Query: 82 MESDDDCPPDLVPVEGLMALSSNDTLPDDTSTSQPAEVAEVAVE-GLPPTATETAIAPGAVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLVSAETLDDVVGRVRAINALAEVRFTKRSAVDLAWILDTECFSSDLAAAVDPSLAPPRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPRAGHGESAXXXXXXADGEACDECAAEEGPGGTACSVHDPSVTTCAVDLPGSLDLPRLERWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSKDLERGIQSCMVQD 1542
MESDDDCPPDLVP +GL+ALSSNDTLP+DTS+ +VAEV VE PPTA PGAVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIA+DG+DGSVLADNLFELRNGCICCAVKDDLV+TLEMLL+RRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPG+GAEA AE GEE S RP+NEAAMQVAYADRVLINKSDLVS ETLDDVVGRVR INALAEVR TKRSAVDLAWILDTECFSS+LAAA+DPSLAPPRALLGTAQQNEGG GSSA DRG A SGPGDAHVH+HD EP GH ES ADGEACDECAA EGPGGTACSVHDPSVTTCAVDLPGSLDL RLERWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSS+DLE GI+SCMVQD
Sbjct: 1 MESDDDCPPDLVPAQGLLALSSNDTLPEDTSS----DVAEVVVEVERPPTA------PGAVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIAKDGADGSVLADNLFELRNGCICCAVKDDLVTTLEMLLQRRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGEGAEAGAE---GEEQSGKRPKNEAAMQVAYADRVLINKSDLVSTETLDDVVGRVRTINALAEVRCTKRSAVDLAWILDTECFSSELAAALDPSLAPPRALLGTAQQNEGGRGSSAADRGIARTGSGPGDAHVHSHDVEPSGGHTESVHHH---ADGEACDECAAAEGPGGTACSVHDPSVTTCAVDLPGSLDLSRLERWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSRDLELGIRSCMVQD 472
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: A0A835YKS4_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKS4_9STRA) HSP 1 Score: 336 bits (861), Expect = 7.960e-104 Identity = 209/437 (47.83%), Postives = 259/437 (59.27%), Query Frame = 1
Query: 253 GAVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLVSAETLDDVVGRVRAINALAEVRFTKRSAVDLAWILDTECFSSDLAAAVDPSLAP-------PRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPRAGHGESAXXXXXXADGEACDECAAEEGPG---GTACSVHDPSVTTCAVDLPGSLDLPRLERWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSKDLERGIQSCM 1533
GAVPVTI+TGFLG+GKTTLLNY+LTQDHG+RIAVIENE GDSMDIE LIA+DG DGSVLADNLFELRNGCICC VKDDLV+TLE LL++R+KFDY+IIETTGLANPGPVA+ FWLD+ALESALRLD+I+T+VDAKN R L E+R EAA+Q+A+ADR+L+NKSDLVSA + + R+R INA ++ T R A+DL +LD CF +D AA P L A+ H H G++C AA+ G G C VH V+T A+ L ++DL L D VYR+KGV++V G D+++V+QGV DLF+VT +AW+ E R KVVFIGR L LE G++ C+
Sbjct: 21 GAVPVTILTGFLGSGKTTLLNYVLTQDHGKRIAVIENEFGDSMDIEQLIAKDGMDGSVLADNLFELRNGCICCTVKDDLVTTLETLLQQRSKFDYIIIETTGLANPGPVAACFWLDDALESALRLDAIITVVDAKNIARYLD--------------------ESR---EAALQIAFADRLLLNKSDLVSAARVAALSSRLRGINAACDIEVTHRCAIDLDKVLDLRCFHADSTAAXXXXXXXXXXXXXXPVELCSDAE-------------------------HEH----------------------GDSCGHGAAQSSSGSSSGAPC-VHTSGVSTFAITLTEAVDLVAL---------DASRPHRTVYRIKGVLAVAGSDKKYVLQGVHDLFDVTETT---AAWEPDEPRLSKVVFIGRGLDRGKLEEGLRGCV 374
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: A0A1V9YJ92_9STRA (Cobalamin synthesis protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJ92_9STRA) HSP 1 Score: 285 bits (730), Expect = 2.290e-85 Identity = 180/431 (41.76%), Postives = 240/431 (55.68%), Query Frame = 1
Query: 259 VPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLVSA-ETLDDVVGRVRAINALAEVRFTKRSAVDLAWILDTECFSSDLAAAVDPSLAPPRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPRAGHGESAXXXXXXADGEACDECAAEEGPGGTACSVHDPSVTTCAVDLPGSLDLPRLERWLGGLLWDPPPG--GTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSKDLERGIQSCMVQD 1542
VPVT++TGFLGAGKTTLLNYILTQDHG+RIAVIENE G+ + +ESLIARDG+DG AD +EL NGCICCAV+DDLVSTLE LL RR++FDYV++ETTG+A+PG +AS+FW+D LE + LD IVT+VDAKN + L SE + EA Q+AYADR+LINK+DL+ A E + ++ +INA+A +T+RS +DL IL+ + FSS+ A V+ L +AT++ A + H V+T V + + +ERWLG LLW+ P G + YR+KGVV+V +F++QGV DLFE+TP+E W E EA K+VFIG L L+ G+++ D
Sbjct: 5 VPVTVLTGFLGAGKTTLLNYILTQDHGKRIAVIENEFGEEIGVESLIARDGADGETFAD-FYELNNGCICCAVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDTELEGRIVLDGIVTVVDAKNVMHHLNG------------------SETSQRQEALSQIAYADRILINKADLMPALEDRAALEAQLHSINAIAPCLWTERSVIDLDTILNVQAFSSERAMDVEQYL-------------------TATNQSVA----------------------------------------------------ADHAQQVSTTCVRSRTPISVAAVERWLGTLLWEAPEGDDASYFYRIKGVVAVADDHRKFILQGVQDLFELTPSE----PWGE-EAPETKIVFIGLRLQPAALQAGLEAAARDD 340
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: A0A067CUL8_SAPPC (CobW C-terminal domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUL8_SAPPC) HSP 1 Score: 284 bits (727), Expect = 5.680e-85 Identity = 176/424 (41.51%), Postives = 240/424 (56.60%), Query Frame = 1
Query: 259 VPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLVSAETLDDVV-GRVRAINALAEVRFTKRSAVDLAWILDTECFSSDLAAAVDPSLAPPRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPRAGHGESAXXXXXXADGEACDECAAEEGPGGTACSVHDPSVTTCAVDLPGSLDLPRLERWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSKDLERGIQS 1527
VPVT++TGFLGAGKTTLLNYILTQ+HG+RIAVIENE G+ + +ESLIARDG+DG AD +EL NGCICCAV+DDLVSTLE LL RR++FDYV++ETTG+A+PG +AS+FW+D LE + LD I+T+VDAKN L G+EH + + EA Q+AYADR+LINK+DLV + T + + ++ INA+A + +T+RS +DL IL+ + FSS+ A V+ LA AT++ T S H V+T + + + +ERWLG LLW+ + YR+KG+VSV + +F++QGV DLFE+TP+E W E R K++FIG L + L+ G+ S
Sbjct: 5 VPVTVLTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGADGETFAD-FYELNNGCICCAVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDTELEGRIVLDGIITVVDAKNVALHLD---------------GDEHGQRQ---EALSQIAYADRILINKADLVPSTTDREALEAQLHGINAIAPLIWTERSQIDLDAILNVQAFSSERALDVERFLA-------------------ATNQ----------------------------------------------------TVSSDHARQVSTYCIRSDAPVTIAAMERWLGHLLWESEES-SHYYRIKGIVSVVDDERKFILQGVQDLFELTPSE----PWAVDEPRVTKIIFIGLELQPEMLQAGLVS 333
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: W4G2S8_9STRA (CobW C-terminal domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2S8_9STRA) HSP 1 Score: 283 bits (723), Expect = 1.970e-84 Identity = 175/422 (41.47%), Postives = 233/422 (55.21%), Query Frame = 1
Query: 259 VPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLV-SAETLDDVVGRVRAINALAEVRFTKRSAVDLAWILDTECFSSDLAAAVDPSLAPPRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPRAGHGESAXXXXXXADGEACDECAAEEGPGGTACSVHDPSVTTCAVDLPGSLDLPRLERWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSKDLERGI 1521
VPVTI+TGFLGAGKTTLLNYILTQ+HG+RIAVIENE G+ + +ESLIARDG++G AD +EL NGCICC+V+DDLVSTLE LL RR++FDYV++ETTG+A+PG +AS+FW+D LE + LD IVTLVDAKN L++ NE Q+AYADR+L+NK+DL+ A+ + G++ A+NALA +T+RS +DL IL+ FSSD A AV +E A E P H +VT+ V L + LE W+G LLW+ ++R+KGVV++E D +F++QGV DLF+V+P+E W E R K+VFIG L S L++G+
Sbjct: 9 VPVTILTGFLGAGKTTLLNYILTQNHGKRIAVIENEFGEEIGVESLIARDGAEGDAFAD-FYELSNGCICCSVRDDLVSTLEELLTRRDRFDYVLVETTGMADPGKLASIFWVDSELEGRITLDGIVTLVDAKNIAWHLEQQT----------------------NEVLSQIAYADRILVNKADLMPDADDRRRLEGQLNAMNALAPCIWTERSNIDLDAILNINAFSSDRAIAV--------------------------------------------------------------------MNEHNATEKP-----FTHTANVTSTCVSRVLPLSVRGLEYWIGSLLWEDATDDRRIFRIKGVVAIENDDRKFILQGVQDLFDVSPSE----KWLPDEPRTTKLVFIGLGLDSNALQQGL 330
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: B5Y598_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y598_PHATC) HSP 1 Score: 276 bits (707), Expect = 6.220e-82 Identity = 190/430 (44.19%), Postives = 237/430 (55.12%), Query Frame = 1
Query: 262 PVTIVTGFLGAGKTTLLNYIL-TQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLVSAETLDDVVGRVRAINALAEVRFTKRSAV-DLAWILDTECFSSDLAAAVDPSLAPPRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPRAGHGESAXXXXXXADGEACDECAAEEGPGGTACSVHDPSVTTCAVDLPGSLDLPRLERWLGGLLWDPPPGGTEVYRVKGVVSVE--GRDER-FVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSKDLERGIQSCMV 1536
PVTI++GFLG+GKTTL+ YIL + DHG+RIAVIENE G+ + +ES+IARDG D L D L EL NGCICC VKD LVSTLE+LL+RR DY++IE +G+ANPGP+AS+FWLDE L S LRLD IVTLVDA + RQL GA EAA Q+AYADR+L+NK DLV + ++ +R I+ A +R T+ SAV DL W+LD CF D VD RAL ++ H H HD HG+ A C C A + H SV+T A+ GS+DL +L++WL LLW P E +V V + G D R F+VQ V DL+E PA W E R CKVVFIGR L +DL +G SCM+
Sbjct: 1 PVTILSGFLGSGKTTLIQYILKSPDHGKRIAVIENEFGEGLAVESMIARDGVDNGSLID-LIELPNGCICCTVKDSLVSTLELLLQRRRDLDYILIECSGMANPGPIASLFWLDEGL-SRLRLDGIVTLVDAAHLERQL------GAT-----------------KEAAQQIAYADRILLNKVDLVDEASALRLLNLIRTIHPTAPIRRTQFSAVPDLTWVLDASCFDVDRVKDVD------RALNEIEHCSD----------------------HSHQHD------HGKEAT----------CSICFAHK---------HTASVSTLAIVEEGSVDLRKLDQWLASLLW---PNQDEQDKVLPVEFTDDHGLDSRRFIVQAVHDLWETHPASRE-LRWDSEEVRDCKVVFIGRNLKKEDLRKGFLSCML 348
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: K3WNX3_GLOUD (CobW C-terminal domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNX3_GLOUD) HSP 1 Score: 277 bits (709), Expect = 1.390e-81 Identity = 179/440 (40.68%), Postives = 253/440 (57.50%), Query Frame = 1
Query: 250 PGAVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLVSAETLDD-VVGRVRAINALAEVRFTKRSAVDLAWILDTECFSSDLAAAVDPSLAPPRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPRAGHGESAXXXXXXADGEACDECAAEEGPGGTACSVHDPSV-TTCAVDLPGS-LDLPRLERWLGGLLWDPPPGGTE-------VYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRC--KVVFIGRLLSSKDLERGIQSCM 1533
P VPVTI++GFLGAGKTTLL YILT +HG+RIAVIENE G+ + +E+LIA+DG++G V D+ +EL NGC+CC+V+DDLV+TLE LL RR++FDY+++ETTG+ANPG VASVFW+D+ LE + LD IVTLVDA L +H + R NEAA Q+AYADR+L+NK DLV++E + +V RV+A+NA+A+V +T R+ +DL IL+ + F+S A ++ L TAQQ + G H H+ +GE + H H ++ TTC G+ LD+ +LERWLG LLWD G + ++R+KGV+++ +F++Q V +LFEV ++ +W E ++VFIG L K LE G +SC+
Sbjct: 36 PPMVPVTILSGFLGAGKTTLLRYILTANHGKRIAVIENEFGEEIGVENLIAKDGANGQVF-DDFYELSNGCVCCSVRDDLVNTLEKLLARRDRFDYILVETTGMANPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLQFHL------------------DHPDTR--NEAASQLAYADRILLNKRDLVTSEERQEAIVARVKAVNAIAKVSWTHRAEIDLDEILNIQSFTSQRALDIESIL--------TAQQLQQQG------------------HHRHSGEGEHKEEH-------------------------------THTGAMQTTCLSIGDGARLDMSKLERWLGELLWDQADGVSSASTKDQRLFRMKGVLAIADEPNKFILQAVHELFEVYVSD---ESWSEASQEDVCSRIVFIGLHLDLKRLESGFRSCI 394
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: A0A3M6VD06_9STRA (CobW C-terminal domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD06_9STRA) HSP 1 Score: 276 bits (707), Expect = 2.330e-81 Identity = 181/449 (40.31%), Postives = 251/449 (55.90%), Query Frame = 1
Query: 259 VPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLVSA-ETLDDVVGRVRAINALAEVRFTKRSAVDLAWILDTECFSSDLAAAVDPSLAPPRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPR--AGHGESAXXXXXXADGEACDECAAEEGPGGTACSVHDPSVTTCAVDLPGSLDLPRLERWLGGLLWDPPPG-GTEV------------YRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGE-----ARRCKVVFIGRLLSSKDLERGIQSCMVQD 1542
+PVTI++GFLGAGKTTLL +IL +DHG+RIAVIENE G+ + +ESL+ARDG+DG V+ D +EL NGC+CC+V+DDLV+TLE LLERR++FDY+++ETTG+A+PG VAS+FW+D L+ + LD IVT+VDA L+ H + Q EAA Q+AYADR+L+NK DLV E + RV+ IN +A V++T+RS VDL IL+ + F+++ A V+ L + LL H+GE + GHG ++C + GG TTC G LD +LERWLG LLW+ G E+ +RVKGVV+V G +F++Q V +LFEV P+E W + E AR +VVFIG L +L+ G++ C+V +
Sbjct: 22 IPVTILSGFLGAGKTTLLQFILLEDHGKRIAVIENEFGEEVGVESLVARDGTDGKVM-DGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDNELDGRIILDGIVTVVDAPRLEFHLK------------------HRDT--QREAAAQLAYADRILLNKGDLVHGQEKRQQIEDRVKQINGIASVKWTERSRVDLDDILNIKSFTTNRAEQVEKEL---QRLL---------------------------------HEGENKDEQGHGNFDD-----------EQCLSATHTGGMQ--------TTCVRIRDGPLDQDKLERWLGKLLWEQDEDVGAEMELGSNTVKHQKLFRVKGVVAVAGDPHKFILQAVHELFEVYPSE---ECWTKDELNGTDARVTQVVFIGLHLRKNELQAGLEGCIVSE 391
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: A0A024GV83_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GV83_9STRA) HSP 1 Score: 276 bits (705), Expect = 2.970e-81 Identity = 178/435 (40.92%), Postives = 250/435 (57.47%), Query Frame = 1
Query: 259 VPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRN-KFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLVSAETL--DDVVGRVRAINALAEVRFTKRSAVDLAWILDTECFSSDLAAAVDPSLAPPRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPRAGHGESAXXXXXXADGEACDECAAEEGPGGTACSVHDPSVTTCAVDLPGSL-DLPRLERWLGGLLWDPPPGGT-----EVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSKDLERG-IQSCM 1533
+PVTI++GFLG+GKTTLLNYILT HG+RIAVIENE G+ + IESL+A+DG DG L + FEL NGCICC+V+DDLV+TLE LLE ++ KFDY+I+ETTG+ANPG VASVFW+D+ LE + LD I+T+VDA N + L+R D+ R NEAA Q+AYADR+L+NK DL+ + D++ +++IN LA +TK+ VDL++IL+ + FS D A V+ L + + +GT ++ +HA+ CD E +H V T V +P + + +LERWLG LLW G E++R+KGVV++E ++++QGV DLFE+T ++ V W + R ++VFIG L D+E IQSC+
Sbjct: 9 IPVTILSGFLGSGKTTLLNYILTASHGKRIAVIENEFGEEIGIESLVAKDGLDGQYLPE-FFELGNGCICCSVRDDLVNTLERLLETKSGKFDYIIVETTGMANPGKVASVFWVDDELEGRMYLDGIITIVDAHNIGKNLER--------DSTR------------NEAASQLAYADRILLNKEDLLEGDNASKDNIESLIQSINGLAPFTWTKKGIVDLSYILEIQAFSMDRANQVELMLKDDL---------------NCSKKGTKDDMESAINSDIHAN-----------------------CDHITNSE-KDKVRGQIHSGKVRTICVTIPQKIFSIQKLERWLGELLWADQKEGLCDANFEIFRIKGVVAIEKSPYKYILQGVHDLFEITSSKEV---WSD---RISRIVFIGTGLQKTDIELSLIQSCL 377
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Match: H3GAA9_PHYRM (CobW C-terminal domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GAA9_PHYRM) HSP 1 Score: 275 bits (702), Expect = 4.490e-81 Identity = 179/443 (40.41%), Postives = 246/443 (55.53%), Query Frame = 1
Query: 247 APGAVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIARDGSDGSVLADNLFELRNGCICCAVKDDLVSTLEMLLERRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGDGAEADAEREKGEEHSEARPQNEAAMQVAYADRVLINKSDLVSAETLDDVVGR-VRAINALAEVRFTKRSAVDLAWILDTECFSSDLAAAVDPSLAPPRALLGTAQQNEGGGGSSATDRGTAGKASGPGDAHVHAHDGEPRAGHGESAXXXXXXADGEACDECAAEEGPGGTACSVHDPSVTTCAVDL-PGSLDLPRLERWLGGLLWDPPPG-GTE---VYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGE-----ARRCKVVFIGRLLSSKDLERGIQSCMVQD 1542
AP +PVTI++GFLGAGKTTLL +IL+ DHGRRIAVIENE GD + +ESL+A+DG+DG+V+ D +EL NGC+CC+V+ DLV+TLE LLERR++FDY+++ETTG+A+PG VASVFW+D+ LE + LD IVTLVDA L+ H + Q EAA Q+AYADR+L+NK DLV + + + + V +N +A VR+T+RS VDL IL+ + F++ A V+ L G H E CD+ + + H + T V + G LD +LERWLG LLW+ G+E ++RVKGVV+V G +F++Q V +LFEV +E W EGE R +VVFIG L +L+ G++ C+V D
Sbjct: 4 APPMIPVTILSGFLGAGKTTLLQFILSADHGRRIAVIENEFGDEVGVESLVAKDGADGAVM-DGFYELSNGCVCCSVRSDLVNTLEKLLERRDRFDYILVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLDFHLR------------------HPDT--QREAAAQLAYADRILLNKGDLVPDQDAREAIEKTVTRVNGVASVRWTERSRVDLDDILNIKSFTTSRAEQVEKEL--------------------------------QGQEH-------------------------ETCDDEHHDH-------TTHTGGMQTMCVRVRDGPLDQDKLERWLGELLWEQDDDVGSERQKLFRVKGVVAVAGEPNKFILQAVHELFEVYASE---ERWSEGELQSKEGRVTQVVFIGLHLRKSELQAGLEGCVVSD 358 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig108.642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig108.642.1 >prot_E-fasciculatus_F_contig108.642.1 ID=prot_E-fasciculatus_F_contig108.642.1|Name=mRNA_E-fasciculatus_F_contig108.642.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=490bp MESDDDCPPDLVPVEGLMALSSNDTLPDDTSTSQPAEVAEVAVEGLPPTAback to top mRNA from alignment at E-fasciculatus_F_contig108:21084..25287+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig108.642.1 ID=mRNA_E-fasciculatus_F_contig108.642.1|Name=mRNA_E-fasciculatus_F_contig108.642.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4204bp|location=Sequence derived from alignment at E-fasciculatus_F_contig108:21084..25287+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig108:21084..25287+ >mRNA_E-fasciculatus_F_contig108.642.1 ID=mRNA_E-fasciculatus_F_contig108.642.1|Name=mRNA_E-fasciculatus_F_contig108.642.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2940bp|location=Sequence derived from alignment at E-fasciculatus_F_contig108:21084..25287+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |