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Homology
BLAST of mRNA_E-fasciculatus_F_contig10782.623.1 vs. uniprot
Match: A0A6H5L0K3_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K3_9PHAE) HSP 1 Score: 340 bits (871), Expect = 8.120e-104 Identity = 251/375 (66.93%), Postives = 263/375 (70.13%), Query Frame = 1
Query: 4 STSADSVKMDSGLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRGLVEIEMSTFPLGDRRGAGEGLGRLPSLPLTLSCLQYQQGVIPATASRTSGRFSCCRGAAAAADVGTAAS--PSDEGSDCSSXXXXXXXXXXXXXXXXXXXXXXXX-CRTPSQGMSNSSGTXXXXXXXXXXXXXXGGDSA-TPSDLYRMRNITAGADNSPA-ATGEQAPAVAPMTSAAGXXXXXXLCGYTLEEGQRVVRSPECGDGLMVHQACFEGEDSTPVFSDDSDGGALKFGCDCGQFHPGVGLTAGVYALSLAAXXXALGPSETLSGAGSPGTGAKGWGGAGDAGAMVSPRLGLRERVREAALEACPVFVQVRP 1113
S SADSVKMDSGLGE XXXXXXXXXXXXXXXXXXXXXXX GS GLVEIEMSTFPL DRRGA G LPSLPLT+SCLQYQQGV T + R SC RGAA DVGTAA+ P DEG D ++ XX CRTP+Q SN XXXXXX DSA TPSD YRMR+ITAGADNSPA G QA APM+SA G LCGYTLEEGQRVVRSPECG+GLMVHQACFE EDSTPVFSDDSDGGALKFGCDCGQFHPGVGLTAGVYALSLA+ AL PS TLSGAG+PG G +GW G GDAGAMVSPR GLRER REAALEACP FVQ P
Sbjct: 27 SASADSVKMDSGLGEGGEEGSWREMXXXXXXXXXXXXXXXXXXXXXXX------GSSGLVEIEMSTFPLKDRRGAEGGFSPLPSLPLTVSCLQYQQGVTATTTRPSYARASCSRGAA---DVGTAAASPPDDEGLDSTNNXXDPTPLPKVSEPESATASTASASCRTPNQDTSNXXXXXXXXXXCDDGEED---DSANTPSDWYRMRDITAGADNSPAPVAGLQA--TAPMSSATGGDCCCCLCGYTLEEGQRVVRSPECGEGLMVHQACFESEDSTPVFSDDSDGGALKFGCDCGQFHPGVGLTAGVYALSLASD--ALAPSATLSGAGTPGAGPEGWLG-GDAGAMVSPRHGLRERAREAALEACPTFVQADP 384
BLAST of mRNA_E-fasciculatus_F_contig10782.623.1 vs. uniprot
Match: D7FN84_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN84_ECTSI) HSP 1 Score: 250 bits (639), Expect = 3.210e-76 Identity = 141/171 (82.46%), Postives = 147/171 (85.96%), Query Frame = 1
Query: 607 MRNITAGADNSPAAT--GEQAPAVAPMTSAAGXXXXXXLCGYTLEEGQRVVRSPECGDGLMVHQACFEGEDSTPVFSDDSDGGALKFGCDCGQFHPGVGLTAGVYALSLAAXXXALGPSETLSGAGSPGTGAKGWGGAGDAGAMVSPRLGLRERVREAALEACPVFVQVRP 1113
MR+ITAGADNSPAA GEQAPA PM+SA G XXXLCGYT+EEGQRVVRSPEC +GLMVHQACFE EDSTPVFSDDSDGGALKFGCDCGQFHPGVGLTAGVYALSLAA AL P ETLSGAG+PG GAKGW G GDAGAMVSPR GLRE+ REAALEACP FVQ P
Sbjct: 1 MRDITAGADNSPAAAVAGEQAPA--PMSSATGGDCXXXLCGYTIEEGQRVVRSPECAEGLMVHQACFESEDSTPVFSDDSDGGALKFGCDCGQFHPGVGLTAGVYALSLAASD-ALAPWETLSGAGTPGAGAKGWVG-GDAGAMVSPRHGLREQAREAALEACPTFVQADP 167
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 252.7 |
| Seed ortholog evalue | 2.6e-64 |
| Seed eggNOG ortholog | 2880.D7FN84 |
| KEGG ko | ko:K04348,ko:K04460 |
| KEGG Pathway | ko04010,ko04020,ko04022,ko04114,ko04218,ko04310,ko04360,ko04370,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04720,ko04724,ko04728,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map04010,map04020,map04022,map04114,map04218,map04310,map04360,map04370,map04380,map04650,map04658,map04659,map04660,map04662,map04720,map04724,map04728,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167 |
| EggNOG free text desc. | calcium-dependent protein serine/threonine phosphatase activity |
| EggNOG OGs | COG0639@1,KOG0375@2759 |
| EC | 3.1.3.16 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01009 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | calcineurin A |
| Ec32 ortholog | Ec-15_003320.1 |
| Exons | 3 |
| Model size | 1116 |
| Cds size | 1089 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10782.623.1 >prot_E-fasciculatus_F_contig10782.623.1 ID=prot_E-fasciculatus_F_contig10782.623.1|Name=mRNA_E-fasciculatus_F_contig10782.623.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=363bp
MDSGLGEGEEEEEEEEEEEEGVDWREMRRRQKQQQEPLQCDADDGDGSRG LVEIEMSTFPLGDRRGAGEGLGRLPSLPLTLSCLQYQQGVIPATASRTSG RFSCCRGAAAAADVGTAASPSDEGSDCSSNNNPTPLPTASEPESATASTA SASCRTPSQGMSNSSGTCCSSSSSCGDDDGDGGDSATPSDLYRMRNITAG ADNSPAATGEQAPAVAPMTSAAGGDCCCCLCGYTLEEGQRVVRSPECGDG LMVHQACFEGEDSTPVFSDDSDGGALKFGCDCGQFHPGVGLTAGVYALSL AAGVYALGPSETLSGAGSPGTGAKGWGGAGDAGAMVSPRLGLRERVREAA LEACPVFVQVRP* back to topmRNA from alignment at E-fasciculatus_F_contig10782:5..4218+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig10782.623.1 ID=mRNA_E-fasciculatus_F_contig10782.623.1|Name=mRNA_E-fasciculatus_F_contig10782.623.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4214bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10782:5..4218+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) TCATCGACATCTGCTGATTCGGTCAAGATGGACTCAGGGTTGGGGGAAGG
AGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGTGGATTGGC
GGGAGATGCGCAGACGACAAAAGCAGCAGCAGGAACCGTTGCAATGCGAT
GCTGATGATGGCGATGGGAGCAGAGGCTTGGTTGAGATCGAGATGAGCAC
GTTCCCCCTGGGCGATCGGAGGGGAGCGGGGGAAGGGCTTGGCCGGCTGC
CGTCGTTGCCGCTGACGCTCTCGTGCCTGCAGTACCAGCAGGGCGTAATA
CCAGCAACCGCATCGCGGACCTCTGGTCGATTTTCCTGCTGCCGTGGCGC
AGCAGCAGCTGCAGACGTTGGGACAGCAGCTTCGCCTTCTGATGAGGGCT
CGGATTGCTCAAGCAACAACAACCCCACGCCGTTGCCGACTGCCTCGGAG
CCCGAGAGCGCGACAGCCAGCACTGCGAGTGCGTCCTGCCGTACTCCCAG
CCAGGGCATGAGCAACAGCAGCGGCACCTGCTGTAGTAGTAGTAGCAGTT
GCGGTGATGATGATGGGGATGGAGGCGACTCGGCAACTCCTTCGGATTTG
TATCGGATGCGAAACATCACCGCAGGCGCAGATAACAGCCCCGCCGCCAC
GGGCGAGCAGGCACCGGCGGTGGCGCCGATGACCTCAGCGGCCGGCGGGG
ACTGCTGCTGCTGCCTGTGCGGCTACACGCTCGAGGAGGGGCAGAGGGTT
GTGAGGAGCCCGGAGTGCGGGGATGGCTTGATGGTGAGTTATTTTGTTAT
TTTGCCCTGCTTTTTGCATGAAAATTGAGTGTGTCGGACGGACCCTTGGG
AACCACAACAAACGGTTAGGTGTTTTTTTGGGAGCATTTGTGGGGCACGT
CGTGTCAGCATCCTCCCACACAAGCTCGATACCAGCAGGCCATGACAAAG
CTACGGCCATGATTCTCCCCCCAACGGAGCAGCGCCGTCAGCGTCTCTTG
TCGCGCCACATGTGTTCGGAAATCGAACACGGGAAAATCGAGATTTTGGC
AAGCGCGCTCGCTCCAAGCAGTTATTTTTGAAAAAGCACAACAACGAAGT
CGCACAGAATCGTCCAGAAGCAAGCAGTCCCTGCTGATGTGTGCGCAACC
TGTGGACCTCGCCCGACTCCCTTTATCTCTCTCTCTTTCTCTCTCTCTCG
GAGATAAGAACGAAGTTCGTGTCTGTCTTGGCAATGGTTTGTGTCTGCAT
TGTGCCCCTTGAGTGGTCTTAGTAATGTGAGGCACCAGCAGCAGTGGCAT
TTGCAACGACACTGCGGTGTGCACTATAACACCAACACACCAAACACACA
GAAAACGGATTTTTGGTAGCCGTCTGTTGTTTGAACTTCAAATCAAATCA
ACAGAGTAGGGGAACCAACTGCTGTTGCAATTGGATAGTCCGGAGTAGAC
AAACAACGGATAGCTTGGGGCGGCGTTGTTTTGCGCGCTAAGCATACTTT
CTCCGCGATACAACCTAGACTATGTATACGGCCCCATAAACCAAGACTGC
TGTGTCTACTGCTGCTGCTTTACAAGTTCGGGGCATAAAAAACGGTGTTT
GTACTTGAATTTTTTCTTATAAAAAATGAAGACACGATTTTTGCGTGACC
TTCCGACCTTCCGTTCCTGTTGTGGGACGTGGGACCCCGGCTGATACGTA
CAGCAGAAATGCATGCACCGAAAGTACTGTGTAGTGGGTACAATAGTGTG
AGTAGTGTAGTAGACAACAGAACCGGCGCCATACTACATGCATAATACAT
GGACGAATACACACACAGCGGTAGGCCGTTGGATTGCGTTTTTTGCCGCG
GTGGGTCTGACGTGTGTTCATTGGCCAGCCGATTTTCTTAGGTACTTCGA
GTCAAAATTCTTCGATTTTCATGAATGGTCCACGCAACCCTGCCACATGT
TGAGTGGTATGTAGACAAACATCCAGCGGTTCATGGTCCAAACTCTTGGC
CGGAACAAGAACACAAAATGCACACTACAGCAGTCTTTTAGTATTAGTGT
TGACAATGAATCTCGAAAACGGGACTTTCTGGAACATGGATAGTCTACAA
TTATATATGGGTGTGTTTTATTAGTTAATTGTTTTGGGTTTGGGTTTGGG
GTGTATTATTTATTTTTTGGTTTTGGGGAGACAATATGGAGATCACCTTC
ATACTGGCTACAATCTCCCGTATAGAACTGTTTTAAAATCGGGGAAGACC
TAGCATACCTTGTGGCTTCCTAGGAGGGCCGCAGAGTACGAAGGCCTCCT
GCAAGGACGACGTTTATTAGGAAAAAGTAAAATACAAACGCAGAAAGACT
ACCCGTTCGAGATATAACCACAGCTAGTCGAAGGGGATGTGTTGAAGCAT
TTACAGCAGCGAGTGGAGGGAAACCAACTGGGTACTGGACTTATTTCGAG
TCTGGTTCAAGCCTTCAACTGATTTTATACTGCATACGAGTTGTCTGTAG
CTGAACCAGGCTGTGTCGGTACAATCACGCTTACCAACCGGTATCGTAGG
GTTCGCTGCATCCTGTGGGATCTTTACGGCATCTGCCGTGTTCATGAACC
CACAGCTGTAGACCATATTTAATGCAGAGCATATATGCAAAGCATATTGT
ATCGGCAACCGTAGAAGAAACGCTTGTTTCGCCGAGCCCTCGCGGCGAAC
ACCTGCTGCGCCAACCTTGACACATGTTCTTGTTCGCCGGGTTTTGTTTG
CGAGACCAGGCATGCGCCGATGCAAACGCGGTGTTCTTATTCTTCCCTAA
TTCTACGCCATTCTCCCGTTATTTCAATCTCCCATTATTCTACGGCCTTC
ATTTTACTTGTTTTATTCTTCCCTTGACGAATATTTGGCTTTTTTCCATT
CCGCCAAACATAGTCTTCCATGTCTTTATTCTGGAATGGGATGCTTGTCC
GGGTACAAAATCCCGTCCCTCGACGATATAGGGGCAGGCAGAGAAGGTGA
TGTCGATAGATTTTCGATCAACCTTACACGGCTTGCTAGGCGAGTAGATA
CAAGGTAGCGTTACTTGTACACCTGCCATGCCTCCGCGATATCGTCACTG
TCAGGTATTTATGAGTACCGGACTCAAAGCACCGACAACAACCATACGCA
TTTCGAAAAACGCCGGGATCACGGAGCACCTCTCAACCTTATTGACTCGC
AGACCCGCAGCAGGCTGTGCTGCAGCTGATTGGCGGCGGATTGTTCTTTA
GCGGCGCCTCGAGTATGAGCAGCAACTGCCGCACTTTAAAGTCGTACTGT
AACACAACTGGTGGTGCTGATGCTGATGCTGTTGCTGCCTGCTACACATG
ATAGGTACATCAAGCTTGCTTCGAAGGCGAAGACAGCACACCAGTGTTCA
GCGACGACTCTGACGGAGGAGCCCTCAAGTTCGGCTGCGACTGTGGGCAG
TTTCACCCGGGGGTCGGACTGACGGCAGGCGTTTACGCGCTATCCTTAGC
AGCAGGTGTGTGTGTTTGTGATCCCGTCCTTGTACAGTAGGTGAACCAAT
GTTGTTGTTGTTGTTGTCTTCACATCTAAATGCCTTCCGATCTCTCTACC
CAGTGCCTTAATCTGTCCGTACTAGTTTAGCACTTGACGCGGTCTACCTT
ACCCCAAAAAAGGTATACAAGAATAAAAATGGACTCGAACGGTCCGCAAG
TCAATACCAATCAACAATAGATAGCCTAGAACATTGGGCGAATATTCTGT
GAGGATTGGGGGTGGGTTCAGTTCCTCGACAGTTGTAATATAGCATAGCC
CAACCAGTAGCGTACGTTTCCCCAACGCTTGTAGAAATAGCACACCCACA
TGGTGTTGGTAGTGTGGTCCAAGTGCTGTGGTGTATGCATACGTTCACGT
GCGTGTTCTCACAGGGACAGACTGCTTGTTTTCTATAGCTTCCGACCAAG
GGGGTGTTGGCGACCCTTGCTGCCCGTTGCACTCCGCAAATGCTGTTTTG
TTCTTACGCGTTCGTGTGCTCCGCTACGGGCTGTTCAGATGCGTTGGGAC
CGTCCGAGACTTTGTCAGGGGCGGGGTCTCCTGGGACAGGGGCCAAGGGG
TGGGGGGGGGCAGGAGACGCCGGGGCGATGGTGTCGCCGCGGCTTGGATT
GAGGGAGCGCGTGAGGGAAGCAGCGTTGGAGGCGTGCCCGGTATTTGTGC
AGGTGCGACCCTAG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig10782:5..4218+ >mRNA_E-fasciculatus_F_contig10782.623.1 ID=mRNA_E-fasciculatus_F_contig10782.623.1|Name=mRNA_E-fasciculatus_F_contig10782.623.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2178bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10782:5..4218+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) ATGGACTCAGGGTTGGGGGAAGGAGAGGAGGAGGAGGAGGAGGAGGAGGA GGAGGAGGAGGGGGTGGATTGGCGGGAGATGCGCAGACGACAAAAGCAGC AGCAGGAACCGTTGCAATGCGATGCTGATGATGGCGATGGGAGCAGAGGC TTGGTTGAGATCGAGATGAGCACGTTCCCCCTGGGCGATCGGAGGGGAGC GGGGGAAGGGCTTGGCCGGCTGCCGTCGTTGCCGCTGACGCTCTCGTGCC TGCAGTACCAGCAGGGCGTAATACCAGCAACCGCATCGCGGACCTCTGGT CGATTTTCCTGCTGCCGTGGCGCAGCAGCAGCTGCAGACGTTGGGACAGC AGCTTCGCCTTCTGATGAGGGCTCGGATTGCTCAAGCAACAACAACCCCA CGCCGTTGCCGACTGCCTCGGAGCCCGAGAGCGCGACAGCCAGCACTGCG AGTGCGTCCTGCCGTACTCCCAGCCAGGGCATGAGCAACAGCAGCGGCAC CTGCTGTAGTAGTAGTAGCAGTTGCGGTGATGATGATGGGGATGGAGGCG ACTCGGCAACTCCTTCGGATTTGTATCGGATGCGAAACATCACCGCAGGC GCAGATAACAGCCCCGCCGCCACGGGCGAGCAGGCACCGGCGGTGGCGCC GATGACCTCAGCGGCCGGCGGGGACTGCTGCTGCTGCCTGTGCGGCTACA CGCTCGAGGAGGGGCAGAGGGTTGTGAGGAGCCCGGAGTGCGGGGATGGC TTGATGATGGACTCAGGGTTGGGGGAAGGAGAGGAGGAGGAGGAGGAGGA GGAGGAGGAGGAGGAGGGGGTGGATTGGCGGGAGATGCGCAGACGACAAA AGCAGCAGCAGGAACCGTTGCAATGCGATGCTGATGATGGCGATGGGAGC AGAGGCTTGGTTGAGATCGAGATGAGCACGTTCCCCCTGGGCGATCGGAG GGGAGCGGGGGAAGGGCTTGGCCGGCTGCCGTCGTTGCCGCTGACGCTCT CGTGCCTGCAGTACCAGCAGGGCGTAATACCAGCAACCGCATCGCGGACC TCTGGTCGATTTTCCTGCTGCCGTGGCGCAGCAGCAGCTGCAGACGTTGG GACAGCAGCTTCGCCTTCTGATGAGGGCTCGGATTGCTCAAGCAACAACA ACCCCACGCCGTTGCCGACTGCCTCGGAGCCCGAGAGCGCGACAGCCAGC ACTGCGAGTGCGTCCTGCCGTACTCCCAGCCAGGGCATGAGCAACAGCAG CGGCACCTGCTGTAGTAGTAGTAGCAGTTGCGGTGATGATGATGGGGATG GAGGCGACTCGGCAACTCCTTCGGATTTGTATCGGATGCGAAACATCACC GCAGGCGCAGATAACAGCCCCGCCGCCACGGGCGAGCAGGCACCGGCGGT GGCGCCGATGACCTCAGCGGCCGGCGGGGACTGCTGCTGCTGCCTGTGCG GCTACACGCTCGAGGAGGGGCAGAGGGTTGTGAGGAGCCCGGAGTGCGGG GATGGCTTGATGGTACATCAAGCTTGCTTCGAAGGCGAAGACAGCACACC AGTGTTCAGCGACGACTCTGACGGAGGAGCCCTCAAGTTCGGCTGCGACT GTGGGCAGTTTCACCCGGGGGTCGGACTGACGGCAGGCGTTTACGCGCTA TCCTTAGCAGCAGGTGTGTGTACATCAAGCTTGCTTCGAAGGCGAAGACA GCACACCAGTGTTCAGCGACGACTCTGACGGAGGAGCCCTCAAGTTCGGC TGCGACTGTGGGCAGTTTCACCCGGGGGTCGGACTGACGGCAGGCGTTTA CGCGCTATCCTTAGCAGCAGGTGTGTATGCGTTGGGACCGTCCGAGACTT TGTCAGGGGCGGGGTCTCCTGGGACAGGGGCCAAGGGGTGGGGGGGGGCA GGAGACGCCGGGGCGATGGTGTCGCCGCGGCTTGGATTGAGGGAGCGCGT GAGGGAAGCAGCGTTGGAGGCGTGCCCGGTATTTGTGCAGGTGCGACCCT AGATGCGTTGGGACCGTCCGAGACTTTGTCAGGGGCGGGGTCTCCTGGGA CAGGGGCCAAGGGGTGGGGGGGGGCAGGAGACGCCGGGGCGATGGTGTCG CCGCGGCTTGGATTGAGGGAGCGCGTGAGGGAAGCAGCGTTGGAGGCGTG CCCGGTATTTGTGCAGGTGCGACCCTAG back to top
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