mRNA_E-fasciculatus_F_contig1078.621.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: D7G6P5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P5_ECTSI) HSP 1 Score: 311 bits (796), Expect = 1.720e-106 Identity = 148/156 (94.87%), Postives = 151/156 (96.79%), Query Frame = 1
Query: 1 MKIFQALVLGMATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTPW 468
MKIFQAL+LGMATVAG VSA ADVTDVTHRVYFD+SI G EAGRITMGLFGNAVP TVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPEL+HDKPGVLSMANSGKDTNGSQFFICTVPTPW
Sbjct: 1 MKIFQALILGMATVAGTVSADADVTDVTHRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPW 156
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: A0A835ZLK1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLK1_9STRA) HSP 1 Score: 221 bits (564), Expect = 3.530e-71 Identity = 109/156 (69.87%), Postives = 123/156 (78.85%), Query Frame = 1
Query: 1 MKIFQALVLGMATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTPW 468
MK+ L L + V+ V++A V VT V+FD+ I GK GRI MGL+G AVP TVENFR LCTGE G GKVY KPL YKGS+FHR+IPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFP EL H +PG+LSMAN+G +TNGSQFFI TV TPW
Sbjct: 1 MKLCGVLALVLCAVSSVMAA---VDSVTKMVFFDMEIDGKPGGRIVMGLYGEAVPKTVENFRALCTGEKGVGKVYHKPLTYKGSSFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPKELKHKEPGMLSMANAGPNTNGSQFFITTVATPW 153
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: A0A5C5WTT8_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rubripirellula amarantea TaxID=2527999 RepID=A0A5C5WTT8_9BACT) HSP 1 Score: 199 bits (506), Expect = 2.380e-62 Identity = 103/150 (68.67%), Postives = 114/150 (76.00%), Query Frame = 1
Query: 16 ALVLGMATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTP 465
A+V V V + + +VTH+VYFDVSI GKEAGRITMGLFG VP TVENFR LCTGEAG PLHYKGS FHRVIP FMLQGGDFT G GTGGESIYG KFDDEAF +H+ PG+LSMAN+G++TNGSQFFI TVPTP
Sbjct: 10 AIVSSFGLVGSVEARSPEDGEVTHKVYFDVSIDGKEAGRITMGLFGKDVPQTVENFRALCTGEAGKTDS-GVPLHYKGSVFHRVIPNFMLQGGDFTAGNGTGGESIYGEKFDDEAFT--FVHNMPGILSMANAGRNTNGSQFFITTVPTP 156
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: W7TPH9_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPH9_9STRA) HSP 1 Score: 198 bits (504), Expect = 4.220e-62 Identity = 101/151 (66.89%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 16 ALVLGMATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTPW 468
A +LGMAT A +S D+T VTH+V+FD+++A K AGRI GL+GN VP TVENFR LCTGE G G R PLHYKGS FHRVIP FMLQGGDFTH G GGESIYGG+F DE F +L H +PG+LSMAN+G+DTNGSQFFI TV T W
Sbjct: 8 AFMLGMATFA--LSQADDLTKVTHKVFFDINVADKPAGRIVFGLYGNTVPRTVENFRALCTGEKGIGGAGR-PLHYKGSKFHRVIPSFMLQGGDFTHNNGMGGESIYGGRFADENF--KLKHTRPGLLSMANAGRDTNGSQFFITTVVTSW 153
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: A0A251V0W7_HELAN (Peptidyl-prolyl cis-trans isomerase n=5 Tax=Asteraceae TaxID=4210 RepID=A0A251V0W7_HELAN) HSP 1 Score: 198 bits (503), Expect = 7.490e-62 Identity = 99/150 (66.00%), Postives = 113/150 (75.33%), Query Frame = 1
Query: 19 LVLGMATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTPW 468
L++G + + D+TDVTH+VYFDV IAGK AGRI GLFGN VP T ENFR LCTGE G GK KPLHYKGSAFHR+IP FM+QGGDFT G G GGESIYG KF+DE F ++ H PG+LSMAN+GK+TNGSQFFI TV T W
Sbjct: 13 LLIGTLALTQAKKSDKDLTDVTHKVYFDVEIAGKPAGRIVFGLFGNTVPKTAENFRALCTGEKGTGKS-GKPLHYKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGEKFNDENF--KIKHTGPGLLSMANAGKNTNGSQFFITTVTTSW 159
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: A0A6A2Z1B7_HIBSY (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Z1B7_HIBSY) HSP 1 Score: 198 bits (503), Expect = 8.500e-62 Identity = 101/153 (66.01%), Postives = 112/153 (73.20%), Query Frame = 1
Query: 10 FQALVLGMATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTPW 468
F ++ G T+ + D+ +VTH+VY DV IAGK AGRI MGLFGN VP T ENFR LCTGE G GK + KPLHYKGS FHR+IP FM+QGGDFT G G GGESIYGGKF DE F EL H PGVLSMAN+G DTNGSQFFI TV T W
Sbjct: 9 FTLVLFGSLTLTQAEQSKDDLKEVTHQVYLDVEIAGKPAGRIVMGLFGNMVPKTTENFRALCTGEKGIGK-WGKPLHYKGSTFHRIIPHFMIQGGDFTLGDGRGGESIYGGKFADENF--ELKHTGPGVLSMANAGPDTNGSQFFITTVTTSW 158
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: A0A445I460_GLYSO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445I460_GLYSO) HSP 1 Score: 199 bits (506), Expect = 1.360e-61 Identity = 101/154 (65.58%), Postives = 113/154 (73.38%), Query Frame = 1
Query: 7 IFQALVLGMATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTPW 468
+F L+ G + + D+ +VTH+VYFDV I GKEAGRI MGLFG AVP T ENFR LCTGE G GK KPLHYKGS+FHR+IP FMLQGGDFTHG G GGESIYG KF DE F +L H PG+LSMAN+G DTNGSQFFI TV T W
Sbjct: 9 LFTLLLFGTLALIQAKKSKEDLKEVTHKVYFDVEINGKEAGRIVMGLFGKAVPKTAENFRALCTGEKGTGKS-GKPLHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENF--KLKHTGPGLLSMANAGPDTNGSQFFITTVTTSW 159
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: A0A7S2FB20_9STRA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FB20_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.590e-61 Identity = 101/145 (69.66%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 34 ATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTPW 468
A A V++ A VT++V+FD+ I GK AGRI MGLFG+ VP TVENFR L TGE G GK K LHYKGSAFHRVIPQFMLQGGDFT G G GGESIYG KF DE F +L H PGVLSMAN+GKDTNGSQFFICTV TPW
Sbjct: 28 ALAALAVASAAPQAKVTNKVFFDIEIGGKPAGRIVMGLFGDVVPKTVENFRALTTGEKGMGKA-GKALHYKGSAFHRVIPQFMLQGGDFTQGNGRGGESIYGSKFKDENF--KLKHTGPGVLSMANAGKDTNGSQFFICTVKTPW 169
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 n=15 Tax=Brassicaceae TaxID=3700 RepID=CP19D_ARATH) HSP 1 Score: 196 bits (498), Expect = 3.910e-61 Identity = 97/139 (69.78%), Postives = 107/139 (76.98%), Query Frame = 1
Query: 52 VSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTPW 468
+ A D+ +VTH+VYFDV I GK AGR+ +GLFG AVP T ENFR LCTGE G GK KPLHYKGS FHR+IP FM+QGGDFTHG G GGESIYG KF DE F +L H PGVLSMANSG+DTNGSQFFI TV T W
Sbjct: 21 IQAKEDLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKS-GKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENF--KLKHTGPGVLSMANSGEDTNGSQFFITTVTTSW 156
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Match: I6Y9L2_LINUS (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Linum usitatissimum TaxID=4006 RepID=I6Y9L2_LINUS) HSP 1 Score: 196 bits (498), Expect = 4.580e-61 Identity = 99/154 (64.29%), Postives = 114/154 (74.03%), Query Frame = 1
Query: 7 IFQALVLGMATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFGNAVPLTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELLHDKPGVLSMANSGKDTNGSQFFICTVPTPW 468
++ AL+ G + + + ++TH+VYFDV I GK AGRITMGL+G AVP T ENFR LCTGE G GK KPLHYKGS+FHR+IP FMLQGGDFTHG G GGESIYG KF DE F +L H PG+LSMAN+GKDTNGSQFFI TV T W
Sbjct: 11 LWGALLFGTLALIQAKKSDEKLKEITHKVYFDVEIDGKPAGRITMGLYGKAVPKTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRIIPSFMLQGGDFTHGDGRGGESIYGEKFADENF--KLKHTGPGLLSMANAGKDTNGSQFFITTVTTSW 161 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1078.621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1078.621.1 >prot_E-fasciculatus_F_contig1078.621.1 ID=prot_E-fasciculatus_F_contig1078.621.1|Name=mRNA_E-fasciculatus_F_contig1078.621.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=156bp MKIFQALVLGMATVAGVVSAGADVTDVTHRVYFDVSIAGKEAGRITMGLFback to top mRNA from alignment at E-fasciculatus_F_contig1078:16781..20205+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1078.621.1 ID=mRNA_E-fasciculatus_F_contig1078.621.1|Name=mRNA_E-fasciculatus_F_contig1078.621.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3425bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1078:16781..20205+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1078:16781..20205+ >mRNA_E-fasciculatus_F_contig1078.621.1 ID=mRNA_E-fasciculatus_F_contig1078.621.1|Name=mRNA_E-fasciculatus_F_contig1078.621.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=936bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1078:16781..20205+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |