mRNA_E-fasciculatus_F_contig10771.616.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10771.616.1
Unique NamemRNA_E-fasciculatus_F_contig10771.616.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: A0A6H5JQR1_9PHAE (Ferredoxin--NADP(+) reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQR1_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 3.910e-144
Identity = 198/214 (92.52%), Postives = 211/214 (98.60%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYKGEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDA PG+KLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPA+EA+KG+AWLFLGVANSDALLYDAEWQQVLKE+PDNFRLDYALSREQ+NKSGGKMYIQDKVEEYGDEVF+KLS+GAHIYFCGLKGMMPGILNMLEKVATKKK+NW+  LKDLK+KG++
Sbjct:  167 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDAEPGAKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAKEAFKGQAWLFLGVANSDALLYDAEWQQVLKEFPDNFRLDYALSREQKNKSGGKMYIQDKVEEYGDEVFQKLSEGAHIYFCGLKGMMPGILNMLEKVATKKKLNWEAFLKDLKQKGQW 380
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: A0A8J5XIC4_DIALT (Ferredoxin--NADP(+) reductase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIC4_DIALT)

HSP 1 Score: 341 bits (874), Expect = 5.140e-115
Identity = 158/214 (73.83%), Postives = 182/214 (85.05%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYKGEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGDDMTG T TLCVRRATY D E GKEDPAKKGVCSN+LCD+TPG ++ +TGPSGKVMLMPE  P+TDLIM+ATGTGIAPYR F+RRLF E TPA  AY+G+AWLFLGVANSD+LLYD EWQ   + +P NFRLDYALSREQ NKSGGKMYIQDKVEEY DE+F KL +GAH+YFCGLKGMMPGI  MLE+VA  K ++W+  L++LKK G++
Sbjct:  132 RYGDDMTGKTATLCVRRATYVDPETGKEDPAKKGVCSNFLCDSTPGREISMTGPSGKVMLMPEKDPKTDLIMVATGTGIAPYRGFIRRLFVEKTPAAAAYEGQAWLFLGVANSDSLLYDDEWQAAKRSFPSNFRLDYALSREQNNKSGGKMYIQDKVEEYADEIFAKLENGAHMYFCGLKGMMPGITEMLERVAQSKGISWEEKLEELKKNGQW 345
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: F0Y3B3_AURAN (Ferredoxin--NADP(+) reductase n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3B3_AURAN)

HSP 1 Score: 339 bits (870), Expect = 1.600e-114
Identity = 158/214 (73.83%), Postives = 182/214 (85.05%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYKGEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGDDMTG TT+LCVRRATYWD EMGK+DPAKKGVCSN++CD+ PG  +K+TGPSGKVMLMPE+K +TD IM+ATGTGIAPYRSF+RRLF E TPA EAYKG AWLFLGVANSDALLYD EWQ  L +YPDNF+LDYALSREQ N  GGKMYIQDKVEEY DE+F +L  GA +YFCGLKGMMPGI +ML+ V  KK +++D  +K LKK G++
Sbjct:  124 RYGDDMTGQTTSLCVRRATYWDPEMGKDDPAKKGVCSNFICDSKPGDPIKMTGPSGKVMLMPEEKADTDYIMVATGTGIAPYRSFIRRLFTETTPAGEAYKGTAWLFLGVANSDALLYDEEWQATLAKYPDNFKLDYALSREQTNTKGGKMYIQDKVEEYADEIFDRLGKGAVMYFCGLKGMMPGIQDMLKGVCDKKGLDYDEYIKGLKKAGQW 337
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: B7GCT8_PHATC (Ferredoxin--NADP(+) reductase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCT8_PHATC)

HSP 1 Score: 339 bits (869), Expect = 2.120e-114
Identity = 157/214 (73.36%), Postives = 184/214 (85.98%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYKGEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGDDMTG T +LCVRRATYW  ++  +DPAKKG+CSN+LCD  PG ++ +TGP+GKVML+PE++P+TD IM+ATGTGIAPYR FVRRLF E TPA EAYKG+AWLFLGVANSDALLYD EWQ VLKEYP+NFRLDYALSREQENK+GGKMYIQDKVEEY DE+F KL  GAHIYFCGLKGMMPGI +ML+ V  +KK+++D  LK LK K ++
Sbjct:  122 RYGDDMTGKTGSLCVRRATYWCPDLKADDPAKKGICSNFLCDTKPGDEVNMTGPAGKVMLLPEEEPDTDYIMVATGTGIAPYRGFVRRLFTEETPAGEAYKGQAWLFLGVANSDALLYDDEWQTVLKEYPENFRLDYALSREQENKNGGKMYIQDKVEEYADEIFAKLDSGAHIYFCGLKGMMPGIQDMLKSVCEEKKVDYDEWLKGLKSKKQW 335
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BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: A0A7S3ZWG2_9STRA (Ferredoxin--NADP(+) reductase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWG2_9STRA)

HSP 1 Score: 335 bits (860), Expect = 2.130e-113
Identity = 154/214 (71.96%), Postives = 186/214 (86.92%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYKGEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGD+M G T++LCVRRATYWD +MGKEDPAKKGVCSN+LCDAT G ++K+TGP+GKVMLMPE+K +TD IM+ATGTGIAPYR F+RRLF E TPA EAYKG AWLFLGVANSDALLYD EWQ    ++PDNFR+DYALSRE++NK GGKMYIQDKVEEY DE+F++L +GA +YFCGLKGMMPGI +ML++V  KK + +D+ + DLKKKG++
Sbjct:   97 RYGDNMAGKTSSLCVRRATYWDPDMGKEDPAKKGVCSNFLCDATAGEQVKMTGPTGKVMLMPEEKADTDYIMVATGTGIAPYRGFIRRLFTETTPAGEAYKGLAWLFLGVANSDALLYDEEWQAAKSKFPDNFRVDYALSREEKNKKGGKMYIQDKVEEYADEIFERLQNGAVMYFCGLKGMMPGIQDMLKEVCRKKGLTYDDFVADLKKKGQW 310
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BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: A0A7S3KVQ4_9STRA (Ferredoxin--NADP(+) reductase n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3KVQ4_9STRA)

HSP 1 Score: 336 bits (861), Expect = 3.590e-113
Identity = 157/214 (73.36%), Postives = 183/214 (85.51%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYKGEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGDDMTG T +LCVRRATYW  E+  +DPAKKG+CSN+LCD  PG+++++TGP+GKVMLMPE+ P TD IM+ATGTGIAPYR F+RRLF E TPA EAYKGEAWLFLGVANSDALLYD EWQ+V K++P NFRLDYALSREQ NKSGGKMYIQDKVEEY DE+F KL +GAHIYFCGLKGMMPGI +ML+KVA  K +++D  LK LK K ++
Sbjct:  123 RYGDDMTGKTGSLCVRRATYWCPELKADDPAKKGICSNFLCDTEPGAEVQMTGPAGKVMLMPEEDPNTDYIMVATGTGIAPYRGFIRRLFVEDTPAAEAYKGEAWLFLGVANSDALLYDDEWQEVKKKFPKNFRLDYALSREQTNKSGGKMYIQDKVEEYADEIFSKLDNGAHIYFCGLKGMMPGIQDMLKKVAEDKGLDYDEWLKGLKSKKQW 336
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: A0A7S3HUU2_9SPIT (Ferredoxin--NADP(+) reductase (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3HUU2_9SPIT)

HSP 1 Score: 335 bits (860), Expect = 1.460e-112
Identity = 158/214 (73.83%), Postives = 179/214 (83.64%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYKGEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGDDMTGTTTTLCVRRATYW  E+  EDPAKKGVCSNYLCDA PG ++KLTGPSGKVML+PE  P  DLIM+ATGTGIAPYRSF+RRLF E TP  E YKG AWLFLGVANSDALLYD EWQ VLK +P+NFR+DYALSREQ NK+GGKMYIQDKV EY DEVF ++ +GAH+YFCGLKGMMPGI  MLE V  +K + W++ L + KK G++
Sbjct:  154 RYGDDMTGTTTTLCVRRATYWCPELKAEDPAKKGVCSNYLCDAKPGDEVKLTGPSGKVMLIPEQNPNVDLIMVATGTGIAPYRSFIRRLFVEKTPFGEVYKGLAWLFLGVANSDALLYDDEWQSVLKSHPNNFRVDYALSREQTNKNGGKMYIQDKVAEYSDEVFNRMDNGAHMYFCGLKGMMPGITEMLEGVCKEKGLVWEDKLGEWKKNGQW 367
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: A0A7S3U4X7_9SPIT (Ferredoxin--NADP(+) reductase (Fragment) n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S3U4X7_9SPIT)

HSP 1 Score: 335 bits (860), Expect = 1.720e-112
Identity = 158/214 (73.83%), Postives = 179/214 (83.64%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYKGEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGDDMTGTTTTLCVRRATYW  E+  EDPAKKGVCSNYLCDA PG ++KLTGPSGKVML+PE  P  DLIM+ATGTGIAPYRSF+RRLF E TP  E YKG AWLFLGVANSDALLYD EWQ VLK +P+NFR+DYALSREQ NK+GGKMYIQDKV EY DEVF ++ +GAH+YFCGLKGMMPGI  MLE V  +K + W++ L + KK G++
Sbjct:  159 RYGDDMTGTTTTLCVRRATYWCPELKAEDPAKKGVCSNYLCDAKPGDEVKLTGPSGKVMLIPEQNPNVDLIMVATGTGIAPYRSFIRRLFVEKTPFGEVYKGLAWLFLGVANSDALLYDDEWQSVLKSHPNNFRVDYALSREQTNKNGGKMYIQDKVAEYSDEVFNRMDNGAHMYFCGLKGMMPGITEMLEGVCKEKGLVWEDKLGEWKKNGQW 372
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: A0A7S3TJG3_EMIHU (Ferredoxin--NADP(+) reductase n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TJG3_EMIHU)

HSP 1 Score: 334 bits (857), Expect = 2.100e-112
Identity = 159/217 (73.27%), Postives = 180/217 (82.95%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYK---GEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGDDMTGTTTTLCVRRATYW  E+  +DPAKKGVCSNYLCD+ PG  +KLTGPSGKVML+PE  P  DLIM+ATGTGIAPYRSF+RRLF E TP  EAY    G+AWLFLGVANSDALLYD EWQ+VLK+YPDNFRLDYALSREQ+NK GGKMYIQDKV EY DE+F K+ +GAH+YFCGLKGMMPGI  MLE V   K + W++ L + KK G++
Sbjct:  131 RYGDDMTGTTTTLCVRRATYWCPELKADDPAKKGVCSNYLCDSKPGDDVKLTGPSGKVMLIPEKDPNVDLIMVATGTGIAPYRSFIRRLFVEKTPFGEAYTKGTGQAWLFLGVANSDALLYDDEWQEVLKKYPDNFRLDYALSREQKNKDGGKMYIQDKVAEYSDEIFSKMDNGAHMYFCGLKGMMPGITEMLEGVCKDKGLVWEDKLSEWKKAGQW 347
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Match: R1DUZ9_EMIHU (Ferredoxin--NADP(+) reductase n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DUZ9_EMIHU)

HSP 1 Score: 334 bits (857), Expect = 2.100e-112
Identity = 159/217 (73.27%), Postives = 180/217 (82.95%), Query Frame = 1 
Query:    1 RYGDDMTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPSGKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYK---GEAWLFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQDKVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTLKDLKKKGEF 642
            RYGDDMTGTTTTLCVRRATYW  E+  +DPAKKGVCSNYLCD+ PG  +KLTGPSGKVML+PE  P  DLIM+ATGTGIAPYRSF+RRLF E TP  EAY    G+AWLFLGVANSDALLYD EWQ+VLK+YPDNFRLDYALSREQ+NK GGKMYIQDKV EY DE+F K+ +GAH+YFCGLKGMMPGI  MLE V   K + W++ L + KK G++
Sbjct:  131 RYGDDMTGTTTTLCVRRATYWCPELKADDPAKKGVCSNYLCDSKPGDDVKLTGPSGKVMLIPEKDPNVDLIMVATGTGIAPYRSFIRRLFVEKTPFGEAYTKGTGQAWLFLGVANSDALLYDDEWQEVLKKYPDNFRLDYALSREQKNKDGGKMYIQDKVAEYSDEIFSKMDNGAHMYFCGLKGMMPGITEMLEGVCKDKGLVWEDKLSEWKKAGQW 347
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10771.616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQR1_9PHAE3.910e-14492.52Ferredoxin--NADP(+) reductase n=2 Tax=Ectocarpus T... [more]
A0A8J5XIC4_DIALT5.140e-11573.83Ferredoxin--NADP(+) reductase n=1 Tax=Diacronema l... [more]
F0Y3B3_AURAN1.600e-11473.83Ferredoxin--NADP(+) reductase n=2 Tax=Aureococcus ... [more]
B7GCT8_PHATC2.120e-11473.36Ferredoxin--NADP(+) reductase n=2 Tax=Phaeodactylu... [more]
A0A7S3ZWG2_9STRA2.130e-11371.96Ferredoxin--NADP(+) reductase n=2 Tax=Pelagomonas ... [more]
A0A7S3KVQ4_9STRA3.590e-11373.36Ferredoxin--NADP(+) reductase n=3 Tax=Bacillarioph... [more]
A0A7S3HUU2_9SPIT1.460e-11273.83Ferredoxin--NADP(+) reductase (Fragment) n=1 Tax=F... [more]
A0A7S3U4X7_9SPIT1.720e-11273.83Ferredoxin--NADP(+) reductase (Fragment) n=3 Tax=E... [more]
A0A7S3TJG3_EMIHU2.100e-11273.27Ferredoxin--NADP(+) reductase n=3 Tax=Emiliania hu... [more]
R1DUZ9_EMIHU2.100e-11273.27Ferredoxin--NADP(+) reductase n=3 Tax=Emiliania hu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10771contigE-fasciculatus_F_contig10771:2526..4245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score409.1
Seed ortholog evalue1.3e-111
Seed eggNOG ortholog2880.D8LCX8
Preferred nameFNR1
KEGG koko:K02641
KEGG Pathwayko00195,ko01100,map00195,map01100
GOsGO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0016020,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0042651,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0055035,GO:0098796,GO:0098807
EggNOG free text desc.NADPH-hemoprotein reductase activity
EggNOG OGsCOG0369@1,KOG1158@2759
EC1.18.1.2
COG Functional cat.P
BiGG ReactioniRC1080.CRv4_Au5_s11_g2609_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size663
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10771.616.1prot_E-fasciculatus_F_contig10771.616.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10771 2526..4230 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927576.4818969-CDS-E-fasciculatus_F_contig10771:2525..27201622927576.4818969-CDS-E-fasciculatus_F_contig10771:2525..2720Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10771 2526..2720 -
1695995604.0968876-CDS-E-fasciculatus_F_contig10771:2525..27201695995604.0968876-CDS-E-fasciculatus_F_contig10771:2525..2720Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10771 2526..2720 -
1622927576.498577-CDS-E-fasciculatus_F_contig10771:3021..33181622927576.498577-CDS-E-fasciculatus_F_contig10771:3021..3318Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10771 3022..3318 -
1695995604.106608-CDS-E-fasciculatus_F_contig10771:3021..33181695995604.106608-CDS-E-fasciculatus_F_contig10771:3021..3318Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10771 3022..3318 -
1622927576.5125244-CDS-E-fasciculatus_F_contig10771:4074..42301622927576.5125244-CDS-E-fasciculatus_F_contig10771:4074..4230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10771 4075..4230 -
1695995604.1145625-CDS-E-fasciculatus_F_contig10771:4074..42301695995604.1145625-CDS-E-fasciculatus_F_contig10771:4074..4230Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10771 4075..4230 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927576.529507-UTR-E-fasciculatus_F_contig10771:4230..42451622927576.529507-UTR-E-fasciculatus_F_contig10771:4230..4245Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10771 4231..4245 -
1695995604.122416-UTR-E-fasciculatus_F_contig10771:4230..42451695995604.122416-UTR-E-fasciculatus_F_contig10771:4230..4245Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10771 4231..4245 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10771.616.1

>prot_E-fasciculatus_F_contig10771.616.1 ID=prot_E-fasciculatus_F_contig10771.616.1|Name=mRNA_E-fasciculatus_F_contig10771.616.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=216bp
MTGTTTTLCVRRATYWDEEMGKEDPAKKGVCSNYLCDATPGSKLKLTGPS
GKVMLMPEDKPETDLIMIATGTGIAPYRSFVRRLFAEATPAREAYKGEAW
LFLGVANSDALLYDAEWQQVLKEYPDNFRLDYALSREQENKSGGKMYIQD
KVEEYGDEVFKKLSDGAHIYFCGLKGMMPGILNMLEKVATKKKMNWDNTL
KDLKKKGEFFPCNCQ*
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mRNA from alignment at E-fasciculatus_F_contig10771:2526..4245-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10771.616.1 ID=mRNA_E-fasciculatus_F_contig10771.616.1|Name=mRNA_E-fasciculatus_F_contig10771.616.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1720bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10771:2526..4245- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGTACGGTGACGACATGACCGGAACTACCACCACCCTCTGCGTGCGCCG
CGCGACCTACTGGGACGAGGAGATGGGCAAGGAGGACCCCGCAAAGAAGG
GTGTCTGCTCCAACTACCTCTGCGACGCCACACCGGGCTCCAAGCTGAAG
CTCACCGGCCCCTCCGGAAAGGTACAGCAGTAGATATGCAAGTTGTTTTC
GTTTGTGGTGTGTTGTCATGGAGGACGTTGCGGCTGTTGGCGATCATCGT
GGTGTCGTCATTTTCGTTGTTGGTGGTTTGGTGGTTGTTGTCGCCGCGTG
AAGGCGTAGGGGCAGGCGAGCAGTCGCTGTCCCCCTCCCCTGGTTCTCCG
GACGCCCGCACTGCATCTTGAATGATAGCTAAAGGTCCCTTAATTGTATT
GCAGTCGATCTGATGACCGCACGACGCCCTGGCTTCATGAGAGAGACTGG
GGGCCACTGCAGATAGGAGAGAGGGAAGGGGGCGGGGAGAGAGAACCAGC
TGATGGTTGTCTCGGGTCTTGGGTGTATCTCCGATACACAACCGAGAGCC
TTTCATAAAGGATTGCATTGCGTTGTTTTGTCCCAAGAACCAGACGAGTG
CATGCACGTACCGTGGTACAGAGCAAGGTGTGTTTTTTTCGTCGAGGGAT
GCCGTTTGCCATTTCCTTTTTATAAGGTGTCGTGCTCGAGGACAACCGAA
CAAGAGAGGGCCGTTGATCCTTCGTCGCACACAGGAAGCGAGAGAAAATA
GGATTGTTGAAAGCATCGCTTTTGACAACTTGATCGGTGTGTGCGGTTTC
GCTCTTCTTTCATGTTGTTTCGTGGGCAAGACGTGTCAACCACAGCAGCG
GTAACAACGGCACACACAAGCTTGGGCGTGTACCGAAACTCACACATGCC
TTTCGCCCCCCCCCCTCCCCGCCGCAGGTGATGCTTATGCCCGAGGACAA
GCCCGAGACCGACCTCATCATGATCGCCACCGGTACCGGTATCGCCCCGT
ACCGCTCGTTCGTCCGCCGTCTGTTCGCCGAGGCCACCCCCGCGAGGGAG
GCCTACAAGGGCGAGGCGTGGCTCTTCCTGGGCGTTGCCAACTCGGACGC
TCTCCTCTACGACGCGGAGTGGCAGCAGGTGCTCAAGGAGTACCCCGACA
ACTTCCGCCTCGACTACGCTCTGTCCCGCGAGCAGGAGAATAAGTCCGGC
GGAAAGATGTACATCCAGGACAAGGTGCGCGTGTTTTTTATTGTTAGCAT
CGACCGCGCTATTCGGCTGCTGTTCGTGGTGTTTTTTTTTTGTGGGCAGC
ATCGACTGCGCTATGTACCCGGCTGACCAATTCAAAAATTTTGTGTGTTC
GTCTTTGTATCTCTACCGCACCAACCGGCTAGCGTTTCATTTCTTCCGAG
GATCCGTGTCTCTTGCATCTCTTCCGTTCCCATGTCAAGCGCTGCCCTGA
CGTTCAACAATGCGTCCTGTCGCTTTCTCGAACCTATGTCCCACGTTGTA
CCGCACCACCGTTGGACCGCTGAAGGTGGAGGAGTACGGCGACGAAGTGT
TCAAGAAGTTGAGCGACGGGGCACACATCTACTTCTGCGGGCTCAAGGGC
ATGATGCCCGGTATCCTTAACATGCTCGAGAAGGTCGCCACCAAGAAGAA
GATGAACTGGGACAACACCCTCAAGGACCTCAAGAAGAAGGGTGAGTTTT
TCCCTTGTAATTGCCAGTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10771:2526..4245-

>mRNA_E-fasciculatus_F_contig10771.616.1 ID=mRNA_E-fasciculatus_F_contig10771.616.1|Name=mRNA_E-fasciculatus_F_contig10771.616.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1296bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10771:2526..4245- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACCGGAACTACCACCACCCTCTGCGTGCGCCGCGCGACCTACTGGGA
CGAGGAGATGGGCAAGGAGGACCCCGCAAAGAAGGGTGTCTGCTCCAACT
ACCTCTGCGACGCCACACCGGGCTCCAAGCTGAAGCTCACCGGCCCCTCC
GGAAAGATGACCGGAACTACCACCACCCTCTGCGTGCGCCGCGCGACCTA
CTGGGACGAGGAGATGGGCAAGGAGGACCCCGCAAAGAAGGGTGTCTGCT
CCAACTACCTCTGCGACGCCACACCGGGCTCCAAGCTGAAGCTCACCGGC
CCCTCCGGAAAGGTGATGCTTATGCCCGAGGACAAGCCCGAGACCGACCT
CATCATGATCGCCACCGGTACCGGTATCGCCCCGTACCGCTCGTTCGTCC
GCCGTCTGTTCGCCGAGGCCACCCCCGCGAGGGAGGCCTACAAGGGCGAG
GCGTGGCTCTTCCTGGGCGTTGCCAACTCGGACGCTCTCCTCTACGACGC
GGAGTGGCAGCAGGTGCTCAAGGAGTACCCCGACAACTTCCGCCTCGACT
ACGCTCTGTCCCGCGAGCAGGAGAATAAGTCCGGCGGAAAGATGTACATC
CAGGACAAGGTGATGCTTATGCCCGAGGACAAGCCCGAGACCGACCTCAT
CATGATCGCCACCGGTACCGGTATCGCCCCGTACCGCTCGTTCGTCCGCC
GTCTGTTCGCCGAGGCCACCCCCGCGAGGGAGGCCTACAAGGGCGAGGCG
TGGCTCTTCCTGGGCGTTGCCAACTCGGACGCTCTCCTCTACGACGCGGA
GTGGCAGCAGGTGCTCAAGGAGTACCCCGACAACTTCCGCCTCGACTACG
CTCTGTCCCGCGAGCAGGAGAATAAGTCCGGCGGAAAGATGTACATCCAG
GACAAGGTGGAGGAGTACGGCGACGAAGTGTTCAAGAAGTTGAGCGACGG
GGCACACATCTACTTCTGCGGGCTCAAGGGCATGATGCCCGGTATCCTTA
ACATGCTCGAGAAGGTCGCCACCAAGAAGAAGATGAACTGGGACAACACC
CTCAAGGACCTCAAGAAGAAGGGTGAGTTTTTCCCTTGTAATTGCCAGTA
GGTGGAGGAGTACGGCGACGAAGTGTTCAAGAAGTTGAGCGACGGGGCAC
ACATCTACTTCTGCGGGCTCAAGGGCATGATGCCCGGTATCCTTAACATG
CTCGAGAAGGTCGCCACCAAGAAGAAGATGAACTGGGACAACACCCTCAA
GGACCTCAAGAAGAAGGGTGAGTTTTTCCCTTGTAATTGCCAGTAG
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