mRNA_E-fasciculatus_F_contig10768.612.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: D7FTH5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH5_ECTSI) HSP 1 Score: 453 bits (1165), Expect = 1.420e-153 Identity = 264/460 (57.39%), Postives = 274/460 (59.57%), Query Frame = 1
Query: 1 QKSMADEGSAPLPPKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDRQLLVKMFRNMMALMGRRRKDEQHEHLYFKFQNSKQEEE--------------------------------------------------------------------------------------------------------------------------------------------------------------VEEGGSSLYASVSWSGDISGGIESSDLPLYPAFHSSAALFEPSPWESAALGAGEEERRSLAAKKKTNLVLTANMTMECANWLQDMCVFALEAEKETPSKALFVDYANLPDAVPEHVFPQHFGMEAEVARTVPDWKDRMFKAAGSYSKGMGTRSKEFTNDVKAKHQNASPLIVEASEKDGGLYEVYRSLETMQSWRRPDSEGA 906
QKSMADEG APLPPKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDR LLVKMFRN MALMGRRR EQHEHLYFKFQNSKQ E VE+G S YASVSWSG ISGGIESSDLPLYPA +SSAALFEPSPWESAA GA +E RRSLA KK T +LT NMTMECANWLQ MC FAL AEKETPSKALFVDYANLPDAVPE+VFPQHFGMEAEVA TVPDWKDRMF+AAGSYSKG+G R+KEFTNDVK KH++ASPLIVEASEKDGGLYEVYRSLE MQSWRRPDSE A
Sbjct: 185 QKSMADEGRAPLPPKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDRHLLVKMFRNTMALMGRRRNGEQHEHLYFKFQNSKQISEAYPEVPWVFVFRDPVEVMVSNLKSYAGAPCVRIPRQEKLRKQASRKFKKLGGGGEPAMLKSKAARDAAALQKTRPKFGRGRGRGSEPWGREPEGVRGGGKRSRSLVEAAVVLGGSAPGEGVTATANGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDGDSDFYASVSWSGGISGGIESSDLPLYPAAYSSAALFEPSPWESAAFGA-DERRRSLATKK-TGQMLTMNMTMECANWLQAMCAFALAAEKETPSKALFVDYANLPDAVPEYVFPQHFGMEAEVAETVPDWKDRMFEAAGSYSKGLGKRTKEFTNDVKEKHKDASPLIVEASEKDGGLYEVYRSLEVMQSWRRPDSEEA 642
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: A0A835ZD42_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD42_9STRA) HSP 1 Score: 141 bits (355), Expect = 7.840e-34 Identity = 104/315 (33.02%), Postives = 157/315 (49.84%), Query Frame = 1
Query: 7 SMADEGSAPLPPKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIR----------ECLTAGCDRQLLVKMFRNMMALMGRRRKD-EQHEHLYFKFQNSKQEEEVEEGGSSLYASVSWSGDISGGIESSDLPLYPAFHSSAALFE---PSPWESAALGAGEEE-RRSLAAKKKTNLVLTANMTMECANWLQDMCVFALEAEKETPSKALFVDYANLPDAVPEHVFPQHFGMEAEVARTVPDWKDRMFKAAGSYSKGMGTRSKEFTN-DVKAKHQNASPLIVEASEKDGGLYEVYRSLETMQSWRRPDSEG 903
++A + L GF++H+TRCGSTLVAN LA L +RVFSES+PP Q +R E D L K F+ ++ALM R R D E HE ++FKF +S++ V W +E + ++ + E + + GAG + R+ + K + + N+ CA WL + A++A++ PS A F+DY LP+AVP++++ +HF DW+ M AA YSK +G S+ D + KH+ A+P IV A+E G LY+ Y + MQ WR+P +G
Sbjct: 721 ALAGSDADALQLGGFVFHDTRCGSTLVANQLAILPENRVFSESRPPVQCLRMYTGYQAVDPERPDLKMDEALFNKCFKGVLALMKRARGDAEPHERIFFKFAPVV---------TSMFPDVPWVYLFRDPVEVMVSNIGRGELAAPCVREGVRAARLQQKETGAGSDWLARTRRSSKALDPEVMENLGNICAEWLLSLDQAAIDAQEAHPSTAAFLDYRQLPEAVPKYLYTEHFKSW--------DWRTAMSDAASHYSKSLGGTSRGAAGGDAQHKHEIAAPQIVAAAE--GALYDSYHVMSEMQPWRKPAFDG 1016
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE) HSP 1 Score: 121 bits (304), Expect = 2.010e-27 Identity = 98/303 (32.34%), Postives = 143/303 (47.19%), Query Frame = 1
Query: 4 KSMADEGSAPLPPK-GFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDRQLLVKMFRNMMALMGRRRKDEQHEHLYFKFQNSKQEEEVEEGGSSLYASVSWSGDISGGIESSDLPLYPAFHSSAALFEPSPWESAALGAGEEERRSLAAKKKTNLVLTANMTMECANWLQDMCVFALEAEKETPSKALFVDYANLPDAVPEHVFPQHFGM---EAEVARTVPDWKDRMFKAAGSYSKGMGTRSKEFTNDVKAKHQNASPLIVEASEKDGGLYEVYRSLETMQSWRRPDSE 900
K + +E + P+PP GFI+HETRCGSTLVANMLA++ + ++SES P + + C C ++ +V R +M M R +H+H YFKFQ+S+ + V +S Y W IE L A E E + K L T A L +C A+ A +E P K + V+Y +LP + V P H+G+ EAE R + +M+ S++KG T SK FT D KH+ AS + EA+++ LY Y L ++ +W SE
Sbjct: 261 KRLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTC--PKCHKEQIVPWLRVIMDAMTR---SARHKHFYFKFQSSEDIDAV----TSAYPDTPWIFIFREPIEVMMSRL------GAQRIGMEGMEKEVAARVERGMKPSKILSKPKLGKPPKET-SAAQLLAGLCKKAIHAFEENPGKGMMVEYPHLPHGIVSTVLPDHYGVTVSEAERERMMTS--TQMYSKVASFAKGPTTDSK-FTEDTDTKHEAASVAVQEAAQRL--LYPDYYKLRSLSTWPAESSE 542
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: D7FT31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT31_ECTSI) HSP 1 Score: 118 bits (295), Expect = 9.310e-27 Identity = 95/297 (31.99%), Postives = 140/297 (47.14%), Query Frame = 1
Query: 4 KSMADEGSAPLPPK-GFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDRQLLVKMFRNMMALMGRRRKDEQHEHLYFKFQNSKQEEEVEEGGSSLYASVSWSGDISGGIESSDLPLYPAFHSSAALFEPSPWESAALGAGEEERRSLAAKKKTNLVLTANMTMECANWLQDMCVFALEAEKETPSKALFVDYANLPDAVPEHVFPQHFGM---EAEVARTVPDWKDRMFKAAGSYSKGMGTRSKEFTNDVKAKHQNASPLIVEASEKDGGLYEVYRSLETMQSW 882
K + +E + P+PP GFI+HETRCGSTLVANMLA++ + ++SES P + + C C ++ +V R +M M R +H+H YFKFQ+S+ + V +S Y W IE L A E E + K L T A L +C A+ A + P K + V+Y +LP + V P H+G+ EAE R + +M+ S++KG T SK FT D KH+ AS + EA+++ LY Y L ++ +W
Sbjct: 128 KRLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTC--PKCHKEQIVPWLRVIMDAMAR---SARHDHFYFKFQSSEDIDAV----TSAYPDTPWIFIFREPIEVMMSRL------GAQRIGMEGMEKEVAARVERGMKPSKIPSKPKLGKPPKET-SAAQVLAGLCKKAIHAFEANPGKGMMVEYPHLPHGILSTVLPDHYGVTVSEAERERMMST--TQMYSKVASFAKGSTTDSK-FTEDTDTKHEAASVAVQEAAQRL--LYADYYKLRSLSTW 403
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: A0A7S1V827_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V827_9STRA) HSP 1 Score: 101 bits (252), Expect = 7.930e-21 Identity = 90/302 (29.80%), Postives = 136/302 (45.03%), Query Frame = 1
Query: 34 LPPKGFIYHETRCGSTLVANMLATLAPS--RVFSESKPPTQTIR----ECLTAGCDRQLLVKMFRNMMALMGRRRKDEQHEHLYFKFQNSKQEEEVEEGGSSLYASVSWSGDISGGIESSDLPLY-PAFHSSAALF---EPSPWESAALGAGEEERRSLAAKKKTNLVLTANMTME--------------CANWLQDMCVFALEAEKETPSKALFVDYANLPDAVPEHVFPQHFGMEAEVARTVPDWKDRMFKAAGSYSKGMGTRSKEFTNDVKAKHQNASPLIVEASEKDGGLYEVYRSLE 867
L G ++HE+RCGSTLVAN L + P RV+SES PP Q IR E T C+ L VK+ ++ + LM R E ++FKFQ+ I + ++ ++ AF + +F EP + L G + + K+ L ++ E CA L + AL A ++ P + V+YA+LP + E +FP+HFG+E P R+ + YSKG G + EF D + K +NA+P + EA++K L + Y LE
Sbjct: 115 LDMPGVVFHESRCGSTLVANSLIAMKPKEHRVYSESSPPIQAIRGVCGEDYTT-CEMDLAVKLLKDTVYLMRRSADVGFEERVFFKFQS---------------------------ISTRNIAVFRQAFPDTPFVFVYREPVEVLMSQLKMGAKNANCVRPKRGPQGELMQHLLEEHDFSSTREMSDEDYCAAHLASITESALSAIEQAPGLGMAVNYADLPKLLHEEIFPKHFGLEVG-----PQEVQRIEQVCSVYSKGAGNKGGEFHEDSEEKKKNATPAMREAAKKF--LQKSYEKLE 381
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: A0A7S0B288_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B288_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 4.610e-19 Identity = 90/309 (29.13%), Postives = 133/309 (43.04%), Query Frame = 1
Query: 34 LPPKGFIYHETRCGSTLVANMLATLAP--SRVFSESKPPTQTIRECLTAGCDRQ--LLVKMFRNMMALMGRRRKDEQHEHLYFKFQNSKQEEEVEEGGSSLYASVSWSGDISGGIESSDLPLYPAFHSSAALFEPSPWESAALGAGEEERRSLAAKKKTNLVLTAN-----------------------MTME--CANWLQDMCVFALEAEKETPSKALFVDYANLPDAVPEHVFPQHFGMEAEVARTVPDWKDRMFKAAGSYSKGMGTRSKEFTNDVKAKHQNASPLIVEASEKDGGLYEVYRSLETM 873
+ P GF++HE+RCGSTLVAN L + P +RV+SES PP + + +G D Q V++ R+++ +MGR D + + L+FK I+S PAF + +PW A + L K KT V T + +T E CA L +C A A +++ FVDYA+LPDA+ E + P HFG + K R+ K +G+YSK T + + D + K + A P I AS K L V+ L+ +
Sbjct: 6 MEPAGFVFHESRCGSTLVANSLMAMDPEANRVYSESPPPVTAAK--MISGSDGQDSSAVRLLRDVIYMMGRTN-DAREKRLFFK------------------------------IQSIGTKSIPAF---MLAYPKTPWVFIHRDAVQVMMSHLKTKDKTEAVCTRSRSAPPSDLVALVKARDPSAKVKKLTTEDYCAAHLASLCEAAYNAYEDSNGIGRFVDYADLPDALVEDIIPNHFGESMN-----EESKARILKISGTYSKAR-TVGRTWKEDSQKKEEAARPEIRAASTKY--LLPVWEKLKRL 270
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: A0A448Z5L2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5L2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.570e-18 Identity = 96/332 (28.92%), Postives = 147/332 (44.28%), Query Frame = 1
Query: 1 QKSMADEGSAPLPPKGFIYHETRCGSTLVANMLA----TLAPSRVFSESKPPTQTIRECLTAG---CDRQLLVKMFRNMMALMGRRR----KDEQHEHLYFKFQNSKQEEEVEEGGSSL------YASVSWSGDISGGIE--SSDL------PLYPAFHSSAALFEPSPWESAALGAGEEERRSLAAKKKTNLVLTANMTME------CANWLQDMCVFALEAEKETPSK--------ALFVDYANLPDAVPEHVFPQHFGMEAEVARTVPDWK-DRMFKAAGSYSKGMGTRS-KEFTNDVKAKHQNASPLIVEASEK-DGGLYEVYRSLET 870
Q + AP P G ++HETRCGSTLVAN+LA T+ SRV+SES PP ++ C G CD L + R++ +MGRRR K EQH +++K Q+ G S+ + +V W +E S L P + + + LG + +L A K + + + CA L + + AL S FV+Y+ LPD + + P HFG+ R +P+ M AG YSKG G ++ +E+ +D +AK + AS + EA+++ G YE ++L +
Sbjct: 226 QSDRNETDEAPYP-SGVVFHETRCGSTLVANLLAGSSPTMGTSRVYSESPPPIAALQACARNGGNACDPDLHSSLIRDVFYVMGRRRPASPKAEQHR-VFYKIQSI--------GSMSIDKFTAAFPTVPWIFVYRDTVEILQSHLQQGRTNPTNSQGQQKSTVIPKVCTRNYNLGLNRQPATTLEAMKDAGVAIDKPPSASLDPIEYCAAHLAGLSLAALHEHDRWQSNHKQAASGGGRFVEYSQLPDRLWNEILPDHFGL----GRPLPEQAISNMETIAGVYSKGRGKKANQEWASDSEAKQETASKQVTEAAKRFASGAYERMKALSS 543
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: A0A7S2S3F9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S3F9_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 4.110e-18 Identity = 86/289 (29.76%), Postives = 140/289 (48.44%), Query Frame = 1
Query: 34 LPPKGFIYHETRCGSTLVANMLATLAPS--RVFSESKPPTQTIREC-----LTAGCDRQLLVKMFRNMMALMGRRRKDEQHEHLYFKFQNSKQEEEVEEGGSSLYASVSWSGDISGGIE--SSDLPLYPAFHSSAALFEPSPWESAALGAGEEERRSLAAKKKTNLVLTANMTMECANWLQDMCVFALEAEKETPSKALFVDYANLPDAVPEHVFPQHFGMEAEVARTVPDWKDRMFKAAGSYSKGMGTRSKEFTNDVKAKHQNASPLIVEASEKDGGLYEVYRSLETM 873
+ PKGF++HE+RCGSTLVAN LA + PS RV+SES PP + ++ C G D+ +++FR+++ +MGR D + ++L+FK Q+ + + + V W ++ S L P + P + G + L KK T +CA L +C A+ + + +PS V+Y LP + + + P+HFG+ A + R+ + + +YSKG G + E+ D K +NAS + A+ D LYE +R LE +
Sbjct: 164 MAPKGFVFHESRCGSTLVANSLAAMDPSKNRVYSESPPPLEVLKSCGLHKGACGGGDQA--IQLFRDVVYMMGRTN-DAKEQNLFFKIQSVGTK--YIDIARMAFPEVPWIFVYRDPVQVMMSHLKYGPHRANCVRQLSIPPTHLKTILDG----KGLTKKKMTP-------EHQCAIHLNTLCESAVSSLQSSPSYGKAVNYNLLPGILVDSIVPEHFGVPLSSAD-----RARITEISSTYSKGKG-EAIEWKEDSSEKEKNASVEVKSAA--DLFLYESFRKLEGL 428
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: A0A7S3ZKE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKE9_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.620e-17 Identity = 82/298 (27.52%), Postives = 127/298 (42.62%), Query Frame = 1
Query: 4 KSMADEGSAPLPPKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDRQLLVKMFRNMMALMGRRRKDEQHEHLYFKFQNSKQEEEVEEGGSSLYASVSWSGDISGGIESSDLPLYPAFHSSAALFEPSPWESA--------------ALGAGEEERRSLAAKKKTNLVLTANMTME---------CANWLQDMCVFALEAEKETPSKALFVDYANLPDAVPEHVFPQHFGMEAEVARTVPDWKDRMFKAAGSYSKGMGTRSK-EFTNDVKAKHQNASPLIVEAS 825
+ M + P+ P GF++HE+R GSTLVANMLA + + V+SES PP + C + C +Q + + ++ALMG + H HL+FKFQ++ P S F +PW +G G R+ + T +L A + CA L + AL+A+ + + L VDYA++P A+ +VFP+HFG+ P+ R A+ YSK G R + +D + K + A+P I A+
Sbjct: 166 EDMRKKNIKPVKPSGFVFHESRVGSTLVANMLAAVPTNIVYSESAPPPAVLNHCRS--CSKQRKTDILQKLIALMGASPTN-YHTHLFFKFQSA---------------------------------TVPNIRSLLDAFPETPWLFVYRDPVQTMMSHFKNGVGNGPCLRQRRSPPPATIKILKAESAAKASRTSPENYCAAHLAMLTSSALDADGSS-DRGLLVDYASMPGALEAYVFPKHFGLSL-----APEDALRTHAASSVYSKARGGRKAGAWESDNEKKERAATPAIKSAA 421
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Match: D7G7Z3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z3_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 4.460e-17 Identity = 85/294 (28.91%), Postives = 125/294 (42.52%), Query Frame = 1
Query: 34 LPPKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDRQLLVKMFRNMMALMGRRRKDEQHEHLYFKFQNSKQEEEVEEGGSSLYASVSWSGDISGGIESSDLPLYPAFHSSAALFEPSPWESAALGAGEEERRSLAAKKKTNLVLTANMTMECANWLQDMCVFALEAEKETPSKALFVDYANLPDAVPEHVFPQHFGMEAEVARTVPDWKDRMFKAAGSYSKGMGTR-----SKEFTN--DVKAKHQNASPLIVEASEKDGGLYEVYRSLETMQSWRRPD 894
+ P GFIYHETRCGSTL ANM+A + P+ + C G +L+ +FR M + + H L+FKFQ+SK +E+ + W +E L A+ A E + A G R ++ CA L+ + AL E L V+Y LP+ + E+V+P+H GM AE ++K M YSKGM T SKE+ D++ K Q + P + A+ + YRSL +Q WR+ +
Sbjct: 196 MDPTGFIYHETRCGSTLSANMIAAV-----------PSNIVHRC-PDGLREELVRTVFRLMGPVQ------DGHTDLFFKFQSSKFLPAIEQ----AWPETKWIYLFRDPLEVMSSNLKGAWRKQVASAERNMTSPAVYNLGGPCVRGAKGGGSRKAPSPESLVTTCAKHLETLNEIALTQIVEGSPNGLAVEYRQLPEVMTEYVYPKHLGM-AETEEERSEFKRWMEPVTHVYSKGMATPAEGAVSKEYQQGMDLELKEQGSDPRMRAAAAT---MCANYRSLVELQRWRKEE 463 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10768.612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10768.612.1 >prot_E-fasciculatus_F_contig10768.612.1 ID=prot_E-fasciculatus_F_contig10768.612.1|Name=mRNA_E-fasciculatus_F_contig10768.612.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=302bp MADEGSAPLPPKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRback to top mRNA from alignment at E-fasciculatus_F_contig10768:95..4242+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10768.612.1 ID=mRNA_E-fasciculatus_F_contig10768.612.1|Name=mRNA_E-fasciculatus_F_contig10768.612.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4148bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10768:95..4242+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10768:95..4242+ >mRNA_E-fasciculatus_F_contig10768.612.1 ID=mRNA_E-fasciculatus_F_contig10768.612.1|Name=mRNA_E-fasciculatus_F_contig10768.612.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1812bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10768:95..4242+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |