mRNA_E-fasciculatus_F_contig1073.583.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: D8LIV2_ECTSI (Queuosine salvage protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV2_ECTSI) HSP 1 Score: 669 bits (1725), Expect = 6.160e-234 Identity = 353/380 (92.89%), Postives = 361/380 (95.00%), Query Frame = 3
Query: 129 MAAMADPQGTLGGEGGLLARVVATSATACEEQKVARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEPAPSTTPTGTAEAATDGAPREGGEIAETAAGASSAGGHPVPVFKPKDTAELRAAAVQACHRMAESLGEDYRPHELSLYLKRLSRRKEYKDAPRFLPKGSRAL 1268
MAAMAD QGTLGG+GGLLARVVATSATACEEQ+VARINDDAMAKF+DGGGVPLDKYKRAASRVPLPLKFDDAAQ EINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALP FQDTETVNG DV+MLKNAQVLAGELS+RMGKAVEDLRFDDSDKLTAV DADVITAL TLGILEPA + TPTGTAE A DGAPREG EIAETA GASSA G P FKPKDTAELRA AVQACHRMAESLG+DYRPHELSLYLKRLSRRKEYKDAPRFLP+ SRAL
Sbjct: 1 MAAMADQQGTLGGKGGLLARVVATSATACEEQQVARINDDAMAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQ-EINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPGFQDTETVNGLDVLMLKNAQVLAGELSSRMGKAVEDLRFDDSDKLTAVADADVITALTTLGILEPAKTATPTGTAETAADGAPREGEEIAETAVGASSADGRVGPAFKPKDTAELRAVAVQACHRMAESLGKDYRPHELSLYLKRLSRRKEYKDAPRFLPRESRAL 379
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: A0A835Z942_9STRA (Queuosine salvage protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z942_9STRA) HSP 1 Score: 241 bits (614), Expect = 1.190e-68 Identity = 164/367 (44.69%), Postives = 209/367 (56.95%), Query Frame = 3
Query: 177 LLARVVATSATACEEQKVARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVRE-DAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPG-VEGLVRSLSGALP-AFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEPAPSTTPTGTAEAATDGAPREGGEIAETAAGASSAGGHPVPVFKPKDTAELRAAAVQACHRMAESLGEDYRPHELSLYLKRLSRRKEYKDAPRFLPKGSRAL 1268
LL+R+ ++A A E Q I A+ V V +KR + VP PL F Q INFH+ LA+L FGGS+EP+L+ T + ++D +FGLIG+H+SR R DA +M++A +S F IP+RE + S+IPGV V+RPG L L L+ G LLS GY D AQF+L + ++ G E LV +L ALP AF D G M KNAQ+LA EL RMGK++ L+ D DKLTAV DAD IT LI LGIL PA G A AA P A A+ AG + F DT LR AA ACH++AE LG+ Y P ++LY+ LSR YKD PRF+P SRAL
Sbjct: 11 LLSRIRQSTAQAYEAQNRVVIYTKALNDLV----VDAKAFKRYTTPVPYPLSFGTPGDQ-INFHTGLAMLRFGGSYEPDLVARTRNTLEDTIRFGLIGAHISRSRFDAAFMRDASPNDISSTFNIPMREAEQVSSIPGVMVERPGPLAPLVADLQEALHAVGARLLSLGYQDAAQFVLDALKAGGGSAERLVSALVQALPSAFDDACEAGGMSAAMHKNAQLLALELHHRMGKSLPLLQLSDVDKLTAVADADTITGLIQLGILRPA------GDAAAAPGSEP----------AVAAEAG---LKAFTAADTNVLRVAACVACHKLAERLGDGYAPISVALYINHLSRSASYKDLPRFIPAKSRAL 353
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: A0A433CWU1_9FUNG (Queuosine salvage protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433CWU1_9FUNG) HSP 1 Score: 125 bits (314), Expect = 1.180e-27 Identity = 106/327 (32.42%), Postives = 152/327 (46.48%), Query Frame = 3
Query: 309 SRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPV-REDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSD----PGVEGLVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFD--DSDKLTAVVDADVITALITLGILEPAPSTTPTGTAEAATDGAPREGGEIAETAAGASSAGGHPVPVFKPKDTAELRAAAVQACHRMAESL-GE-------DYRPHELSLYLKRLSRRKEYKDAPRF 1244
S V +PLKFD QQEINF + + LL+FG + L TG D +FG + H+ A+ + V V++ F+IP+ RE P +P +T+ P L A+A+ SVLNETG+ LL+ GY +M+QFIL + + + P GLV A P F+D V+G +V + K AQ+LA L + + + RFD D LT D + T L LG++ R +A A G D LRAAA+ AC + + GE D +L +YL RL + Y++ RF
Sbjct: 38 STVRMPLKFD-TTQQEINFIAFVDLLNFGSGYRVPLHEATGRGAFDTVRFGAMSHHIGGLPWTASHFHSTTVFEVAQTFQIPLDREVHPEGMPFLTMSEPHELRKLAEAITSVLNETGQVLLNGGYANMSQFILQATKPEQGRPPSAVGLVEKFVRAFPGFRDMAKVDGQNVYLFKKAQILAYHLYI-LFRTQDPARFDFVDIASLTIFSDNVIPTMLAHLGVV--------------------RIPDSLARRIAVHEDIG--------TADATRLRAAAIFACEEIVRATRGESGLGPVRDMTEADLDVYLWRLGKVGAYREVTRF 334
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: A0A2D4BR61_PYTIN (Queuosine salvage protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR61_PYTIN) HSP 1 Score: 123 bits (308), Expect = 7.090e-27 Identity = 92/268 (34.33%), Postives = 136/268 (50.75%), Query Frame = 3
Query: 177 LLARVVATSATACEEQK-VARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPV-REDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARS----DPGVEGLVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILE 962
LLARV ++ A V IN+D + F+D + +Y+ ++ PL F + Q E+NF +LLALLSFG + EL + T + FGLIG ++S RLDA +M + +++ F +P+ R++ ST G+ V +PG L A+ + L E RG++D+ F+L RS P LV SL PAF D G+ LK AQ++A L R + E+ RF+D + TA+ D + L LGILE
Sbjct: 11 LLARVRSSCAAQLRHNDCVVAINNDKIRAFLDE--LDWSQYEELSAPQRFPLNFR-SLQDEVNFMTLLALLSFGSGYRKELHKYTQRGASETILFGLIGMYISVPRLDADYMAXVSIDVLADFFSLPLDRDEEIST--GIYVSKPGPLRPLAEMMHKKLKE-------RGFSDLGAFVLAHLRSTESSSPSAAHLVESLVETFPAFDDHREYRGASCFFLKRAQLVAVSLYRRFQETNEEFRFEDVSEXTALSDNVLPCVLRALGILE 266
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: A0A7S3DF13_9EUKA (Queuosine salvage protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DF13_9EUKA) HSP 1 Score: 110 bits (276), Expect = 1.190e-22 Identity = 101/365 (27.67%), Postives = 161/365 (44.11%), Query Frame = 3
Query: 207 TACEE----QKVARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPAFQDTETVNGS-------DVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEPAPSTTPTGTAEAATDGAPREGGEIAETAAGASSAGGHPVPVFKP-KDTAELRAAAVQACHRMAESLGE----DYRPHELSLYLKRLSRRKEYKDAPRFLPK 1253
T+CE+ K ++N++ + F V L + + A +PLPL+F + + E+NF + L L++FG + L G + +G+IG H+S ERLDA +++ + + F+I R ++ +++PG+T + PG L A+ + VLN+ G L +G A + +D G+V+ L PAF D V DV K AQ+ A +L + + E F D LT D + L GI+E E +A+ V KP ++ ELRAAAV AC + SL E + +L YL RL ++ Y++ R K
Sbjct: 10 TSCEKLIETAKHVKVNEEKVKDFA--ANVVLKELENGARPIPLPLRFP-SWEDEVNFWTCLNLINFGSGYRHLLKESHGKGAYETMLYGMIGLHISGERLDAERLQSINALDIESCFRIKYRVESATSVPGLTKEGPGPLYDLAKRIQKVLNDAGRILWEKGQKSFATLLFGD--NDFTAAGVVKKLVETFPAFDDHTFVKVDEGEGGHVDVAYYKKAQLNACDLYKALRRKDERFAFADISSLTVFTDNVLPAVLRYEGIIEV-------------------EEELVAKI---------DKKEVIKPGREECELRAAAVVACEHIIASLKEQRDVEIPAMDLDYYLWRLGKKDGYRERERHYTK 341
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: W7U497_9STRA (Queuosine salvage protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U497_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.760e-20 Identity = 82/263 (31.18%), Postives = 127/263 (48.29%), Query Frame = 3
Query: 210 ACEEQKVARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTG---SNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAP-STIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSD--PGVEGLVRSLSGALPA-FQDTETVNGSDVVM----LKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEP 965
A E + R++ +A+ + L + + +RV LPLKF E+NFH++L+LLSFG ++E + + +G + D FGLIG HLS+ L A ++ V+ F I E+ P ++P + V+RPG L L + +N G L G D+A FIL + R + P V LV +L A P+ F GS K + +LAGEL R+ + + F D + +IT L++ G+L P
Sbjct: 26 ASERTSIVRVDHEAVGRLA--AQFSLSEIRDKVARVGLPLKFPRPLD-ELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVLCP 285
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: A0A0C3AX27_9AGAM (Queuosine salvage protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AX27_9AGAM) HSP 1 Score: 97.4 bits (241), Expect = 9.120e-18 Identity = 88/301 (29.24%), Postives = 142/301 (47.18%), Query Frame = 3
Query: 315 VPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLS----RERLDATWMKNAHVGSVSEGFKIPVR---EDAPSTIPGVTVDRPGA-LVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEG-------LVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVED-LRFDDSDKLTAVVDADVITALITLGILEPAPSTTPTGTAEAATDGAPREGGEIAETAAGASSAGGHPVPVFKPKDTAE----LRAAAVQACHRMAES 1157
V +PL+F A EIN S+L++L+F S+ L + TG D + + G +LS + L A +KN G V+E ++ E A TIPG+T+ + G L + +VLNETG L++RGY ++ +F+LH+ + EG ++ + A PAF+D NG +V + K + L R G A + D+ +L D + + L+ GIL+ + + P EAA G + +G + + P+ +AE +RAAAV AC + E+
Sbjct: 63 VAMPLQFPTVAS-EINVISVLSILNFAHSYRVPLKKATGRGAYDTMRALIFGLYLSSNDEEDLLSAKGLKNLTSGRVAELMQLSGHLHIEQAHPTIPGLTIGQLGGPLYELVTEVTNVLNETGAILVTRGYPNLGEFVLHALKMGQTSEGGPVDPEVVLDEVIRAFPAFRDVGVYNGKEVFVFKKVLFMLHALVMRFGNATPPKIPLPDTSQLPIFSDNVIPSMLVHFGILDLSAANVPK-LREAAPFGTLAVAANLHYVPSGEKKSNSSEMMAKGPELSAEEAYVMRAAAVDACEMIVEA 361
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: L1ID34_GUITC (Queuosine salvage protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ID34_GUITC) HSP 1 Score: 89.4 bits (220), Expect = 4.830e-15 Identity = 85/298 (28.52%), Postives = 127/298 (42.62%), Query Frame = 3
Query: 312 RVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLT---GSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSA--------RSDPGVEG--LVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEPAPSTTPTGTAEAATDGAPREGGEIAETAAGASSAGGHPVPVFKPKDTAELRAAAVQACHRMAESLGE 1166
R LPL FDD +QEINF++LLA LSFG + + G D+ LI H+ + LDA + + ++S+ IP+ ++ + D P SVL+ L SRG+ D+A FIL S SD LV L FQD V S V + + AQ++ +L AR L F D + LT DA+ +T L L ++E +P+ ++ E AG+ ++ A LR A V+AC ++AE + +
Sbjct: 89 RFGLPLVFDDV-KQEINFYALLATLSFGSGWQEGVWSKAPTKGVPTRDSVLNMLISLHMDSKNLDAAGLAEVSLFALSQALDIPLTKEKRLDGGPIRQDVPSDYRWLVDKYYSVLSSLSSDLTSRGFKDLADFILSSRMHGHVRVDESDVNFSASLLVERLVKCFETFQDVANVGQSSVPLHRKAQLVCEDLVARFAAREHRLNFTDMEDLTLGSDAETVTWLRKLSLIEVSPALA-------------KKIDSDKEIEAGS-------------REEAALRVAGVKACMKLAEEINK 359
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: A0A6H5L2L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L6_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 1.270e-13 Identity = 64/152 (42.11%), Postives = 84/152 (55.26%), Query Frame = 3
Query: 2094 IGKTEMYRPDSNLDGIDDARAIYHFVGANNPRHDA*TMTEGF-NDIKLVMSM-GR--LAEGEKSR*A-----GQSDAKC-GKVAGYASEPMLGEEVVVVRMGPRTHSCPRTHLVSGSWWACQR------FLYEAHPDVNPPMRKGGVNEKLI 2501
IGK E+YRP+S L GI+ R +YHF GAN P+ D T TEG ND KLV GR L+ EKS+ G ++C GK AG +P+ GEE V R RT+ RT L S ACQR ++ + +P + P +R+G V E +I
Sbjct: 526 IGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLENDCKLVRKREGRDSLSSQEKSKLVEVKVLGAVASRCKGKGAGL-QDPVSGEEDVTCRKVKRTYRL-RTRLASCFCSACQRCEHEQCYVSKTYPRLLPALREGEVKETVI 675
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 6.050e-13 Identity = 62/153 (40.52%), Postives = 80/153 (52.29%), Query Frame = 3
Query: 2091 YIGKTEMYRPDSNLDGIDDARAIYHFVGANNPRHDA*TMTEGFNDI-KLVMSM---GRLAEGEKSR*AGQSDAKC---------GKVAGYASEPMLGEEVVVVRMGPRTHSCPRTHLVSGSWWACQRFLYE------AHPDVNPPMRKGGVNE 2492
+IGK E+YRP+S L+G++ R +YHF GAN P+ D T TEG KLV+ GR + EKSR + K G+ AG +P+ GEE V R RT+S RT L S ACQR YE +P + P M+KG V E
Sbjct: 731 FIGKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTTTEGLEGYCKLVLRSEGGGRSSNLEKSR---LGEVKVLGAVASRWKGQGAGL-QDPVSGEEDVTCRKVKRTYSL-RTRLASCFCSACQRSEYEQCYVSKTYPRLVPAMQKGVVKE 878 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1073.583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1073.583.1 >prot_E-fasciculatus_F_contig1073.583.1 ID=prot_E-fasciculatus_F_contig1073.583.1|Name=mRNA_E-fasciculatus_F_contig1073.583.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=381bp MAAMADPQGTLGGEGGLLARVVATSATACEEQKVARINDDAMAKFVDGGGback to top mRNA from alignment at E-fasciculatus_F_contig1073:2720..10323+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1073.583.1 ID=mRNA_E-fasciculatus_F_contig1073.583.1|Name=mRNA_E-fasciculatus_F_contig1073.583.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7604bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1073:2720..10323+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1073:2720..10323+ >mRNA_E-fasciculatus_F_contig1073.583.1 ID=mRNA_E-fasciculatus_F_contig1073.583.1|Name=mRNA_E-fasciculatus_F_contig1073.583.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2286bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1073:2720..10323+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |