mRNA_E-fasciculatus_F_contig10711.568.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10711.568.1
Unique NamemRNA_E-fasciculatus_F_contig10711.568.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: D7FQV6_ECTSI (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQV6_ECTSI)

HSP 1 Score: 459 bits (1182), Expect = 6.600e-161
Identity = 234/239 (97.91%), Postives = 237/239 (99.16%), Query Frame = 1 
Query:   10 DDKAKGGDAEVASVVVPKGIEEVVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            DDKAK GDAEVASVVVPKGIEEVVVHPLVLLSTVDHYNRVA+DAKKRVVGVLLGSKYKGTVDVTNSFAVPFEED RNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKH+ASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQ+
Sbjct:   51 DDKAKSGDAEVASVVVPKGIEEVVVHPLVLLSTVDHYNRVARDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDVRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHVASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQI 289
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BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: A0A835Z1W9_9STRA (26S proteasome non-ATPase regulatory subunit 7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1W9_9STRA)

HSP 1 Score: 365 bits (938), Expect = 2.400e-124
Identity = 186/240 (77.50%), Postives = 206/240 (85.83%), Query Frame = 1 
Query:    7 KDDKAKGGDAEVASVVVPKGIEEVVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            KDD A+   A   +  +P    EVVVHPLVLLS VDHYNRVAKD KKR VGVLLGSKYKGTVDVTNSFAVPFEED RNP++WYLDHNFLE MF MFKKVAAKERI GFYSTGPKIRENDL IA LFKRFC +P+YVI+DVR  VEG+PTTAY TAEEVE +GKEIQ TFKH+ SS+GALEAEEVGVEHLLRDINDPSVS+LANQIKHK++AL+GL+ +LEE+QTYLK V  G LPVNNQ+
Sbjct:   12 KDDAAEAAAAAALTAALPD--LEVVVHPLVLLSVVDHYNRVAKDTKKRAVGVLLGSKYKGTVDVTNSFAVPFEEDSRNPSVWYLDHNFLESMFGMFKKVAAKERIVGFYSTGPKIRENDLKIAALFKRFCSDPLYVIVDVRTGVEGMPTTAYRTAEEVEGEGKEIQTTFKHVPSSIGALEAEEVGVEHLLRDINDPSVSTLANQIKHKMAALAGLRERLEEVQTYLKAVQSGALPVNNQI 249
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BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: A0A6S9JFQ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JFQ0_HETAK)

HSP 1 Score: 359 bits (921), Expect = 6.540e-122
Identity = 178/231 (77.06%), Postives = 203/231 (87.88%), Query Frame = 1 
Query:   34 AEVASVVVPKGIEEVVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            A   S V+      VVVHPLVLLS VDHYNRVAKD KKRVVGVLLGS +KGTVDVTNSFAVPFEED +NP IWYLDHN+LE MF MF+KVAAKERI GFYSTGPKI+ENDL I ELF+RFCP+PVYVIIDVRP++EG+PTTAY + EEVEA+GKE+Q+ F+HL S+VGALEAEEVGVEHLLRDINDPS S+LA Q++HKL+AL GLK KLEEM+TYL+NVLDG+LPVNNQ+
Sbjct:   12 AVAPSKVLKSAPVNVVVHPLVLLSAVDHYNRVAKDTKKRVVGVLLGSTFKGTVDVTNSFAVPFEEDLKNPTIWYLDHNYLENMFNMFRKVAAKERIVGFYSTGPKIKENDLEIDELFRRFCPSPVYVIIDVRPELEGLPTTAYHSVEEVEAEGKEVQRAFRHLPSAVGALEAEEVGVEHLLRDINDPSTSTLAAQVRHKLAALVGLKEKLEEMRTYLQNVLDGRLPVNNQI 242
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: A0A7S2XZZ4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZZ4_9STRA)

HSP 1 Score: 342 bits (878), Expect = 3.000e-115
Identity = 170/218 (77.98%), Postives = 193/218 (88.53%), Query Frame = 1 
Query:   73 EVVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            EVV+HPLVLLS VDHYNRVAKD KKRVVGVLLG   +GTVDVTNSFAVPFEED RNP IWYLDHNFLE M AMF+KV AKER+ GFYS+GPK+RENDL +  LF+RFC +PV VIIDVRP VEG+PTTAY   EEVEADGKEIQKTFKH+A S+GALEAEEVGVEHLLRDINDPSVS+LA+QIKHK+++L GLK +L EM+ YL+NVL+G+LPVNNQ+
Sbjct:   34 EVVIHPLVLLSAVDHYNRVAKDTKKRVVGVLLGQSTRGTVDVTNSFAVPFEEDLRNPAIWYLDHNFLENMAAMFRKVNAKERVVGFYSSGPKLRENDLELHTLFERFCTHPVCVIIDVRPGVEGLPTTAYRAREEVEADGKEIQKTFKHVACSIGALEAEEVGVEHLLRDINDPSVSTLASQIKHKMTSLGGLKERLLEMRDYLQNVLEGRLPVNNQI 251
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BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: A0A7S2SA56_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SA56_9STRA)

HSP 1 Score: 337 bits (863), Expect = 5.490e-113
Identity = 163/217 (75.12%), Postives = 194/217 (89.40%), Query Frame = 1 
Query:   76 VVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            VVVHPLVLLSTVDHYNRVAKD  KRVVGVLLGS  KG VDVTNSFAVPFEED +NP I++LDH++LE MF M+KKV A+E+I G+YSTGPKI+END+ I ++ +RFCPNPV+VIIDVRPDVEGIPTTAY++ EEVE+DGKEIQ++FKH+ SSVGA EAEEVGVEHLLRD+NDPSVS+LAN +KHK+S L+GL+ +L EM+TYL+NVL GKLP NNQ+
Sbjct:   23 VVVHPLVLLSTVDHYNRVAKDTSKRVVGVLLGSSTKGVVDVTNSFAVPFEEDKKNPAIFFLDHSYLETMFRMYKKVNAREKIMGYYSTGPKIKENDIKIDDIMRRFCPNPVFVIIDVRPDVEGIPTTAYLSVEEVESDGKEIQRSFKHIPSSVGAFEAEEVGVEHLLRDVNDPSVSTLANLVKHKISGLTGLREQLLEMKTYLENVLTGKLPANNQI 239
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BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: A0A2D4CCS2_PYTIN (26S proteasome non-ATPase regulatory subunit 7 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CCS2_PYTIN)

HSP 1 Score: 334 bits (856), Expect = 2.950e-112
Identity = 163/219 (74.43%), Postives = 191/219 (87.21%), Query Frame = 1 
Query:   70 EEVVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            EEVV HPLVLLS VDHYNRVAKD  KRVVGVLLGS ++G  D+TNSFAVPF+ED RNP IWYLDH++LE MF MFKK+ AKERI GFYSTGPKIR+ DL I ELF+R+CPNPV VI DVRP+VEG+PTTAY + EEVE DGK I++TFKH+ S++GA EAEEVGVEHLLRDINDPSVSSLA Q+KHK++AL+GLK +LEEM+TYL+NVL G+LP N+Q+
Sbjct:   12 EEVVTHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSTFQGKCDITNSFAVPFDEDLRNPGIWYLDHDYLESMFNMFKKINAKERIVGFYSTGPKIRKADLEIDELFRRYCPNPVLVICDVRPNVEGLPTTAYGSIEEVEEDGKAIKRTFKHIKSTIGAYEAEEVGVEHLLRDINDPSVSSLAGQVKHKMTALAGLKERLEEMKTYLENVLAGRLPPNHQI 230
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BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: A0A067D158_SAPPC (MPN domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D158_SAPPC)

HSP 1 Score: 332 bits (850), Expect = 1.310e-111
Identity = 165/224 (73.66%), Postives = 192/224 (85.71%), Query Frame = 1 
Query:   55 VPKGIEEVVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            VP    EV+ HPLVLLS VDHYNRVAKD  KRVVGVLLGS  KG  DVTNSFAVPF+ED R+P IWYLDH+FLE M AMFKK++A ERI GFYSTGPKIR  DLA+ ELF+R+CPNPV VI DVRP+VEG+PTTAY + EEVE DGK I++TFKH+ S++GA EAEEVGVEHLLRDINDPSVSSLA Q+KHK++AL+GLK ++EEM+ YL+NVLDGKLPVN+Q+
Sbjct:    7 VPGLPTEVMTHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSVSKGKCDVTNSFAVPFDEDLRHPTIWYLDHDFLENMNAMFKKISANERIVGFYSTGPKIRAADLALDELFRRYCPNPVLVICDVRPNVEGLPTTAYGSIEEVEEDGKAIKRTFKHIKSTIGAYEAEEVGVEHLLRDINDPSVSSLAGQVKHKMTALNGLKERVEEMRLYLQNVLDGKLPVNHQI 230
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: K3WRI7_GLOUD (MPN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRI7_GLOUD)

HSP 1 Score: 331 bits (848), Expect = 6.100e-111
Identity = 161/219 (73.52%), Postives = 190/219 (86.76%), Query Frame = 1 
Query:   70 EEVVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            EEVV HPLVLLS VDHYNRVA+D  KRVVGVLLGS ++G  D+TNSFAVPF+ED RNP IWYLDH+FLE M+ MFKK+ AKERI GFYSTGPKIR+ DL I ELF+R+CPNPV VI DVRP+VEG+PTTAY + EEVE DGK I++ FKH+ S++GA EAEEVGVEHLLRDINDPSVSSLA Q+KHK++AL+GLK +LEEM+TYL+NV+ GKLP N+Q+
Sbjct:   19 EEVVTHPLVLLSIVDHYNRVARDTSKRVVGVLLGSTFQGKCDITNSFAVPFDEDLRNPGIWYLDHDFLENMYQMFKKINAKERIVGFYSTGPKIRKPDLEIDELFRRYCPNPVLVICDVRPNVEGLPTTAYGSIEEVEEDGKAIKRIFKHIKSTIGAYEAEEVGVEHLLRDINDPSVSSLAGQVKHKMTALAGLKERLEEMKTYLENVVAGKLPPNHQI 237
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BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: A0A7S2H307_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H307_9STRA)

HSP 1 Score: 330 bits (845), Expect = 1.630e-110
Identity = 164/231 (71.00%), Postives = 194/231 (83.98%), Query Frame = 1 
Query:   37 EVASVVVPKGIE-EVVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            E AS V  K  +  VV+HPLVLLS VDHYNR AKD KKRVVGVLLGS  +GT+D TNSF VPFEED RNPN+++LDHN+LE MF M+KKV A+ERI GFYSTGPKI+END+ I  + +RFCPNP +VIIDVRP VE IPTTAY++ EEVE+DGKEIQ++FKH+ SSVGA +AEEVGVEHLLRD+NDPSVS+LANQIKHK  AL+GLK +L EM+ YL+NV  G+LPVNNQ+
Sbjct:    4 EAASGVGGKSEQTRVVLHPLVLLSVVDHYNRAAKDTKKRVVGVLLGSSSRGTIDCTNSFGVPFEEDLRNPNVYFLDHNYLETMFRMYKKVNARERIVGFYSTGPKIKENDIKIDAVMRRFCPNPAFVIIDVRPHVENIPTTAYLSVEEVESDGKEIQRSFKHIPSSVGAYQAEEVGVEHLLRDVNDPSVSTLANQIKHKTQALAGLKEQLMEMKAYLENVTSGRLPVNNQI 234
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Match: H3G7T3_PHYRM (MPN domain-containing protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3G7T3_PHYRM)

HSP 1 Score: 327 bits (838), Expect = 3.260e-110
Identity = 159/219 (72.60%), Postives = 188/219 (85.84%), Query Frame = 1 
Query:   70 EEVVVHPLVLLSTVDHYNRVAKDAKKRVVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKKVAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIPTTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSVSSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV 726
            EEVV HPLVLLS VDHYNRVA+D  KRVVGVLLGS + G  D+TNSFAVPF+ED RNP IWYLDH+FLE M+ MFKK+ AKERI GFYS+GPKIR+ DL I +LF+R+CPNPV VI DVRP VEG+PTTAY + EEVE DGK I++ FKH+ S+VGA EAEEVGVEHLLRDINDPSVSSLA Q+KHK++AL+GLK +LEEM+TYL+NV+ G+LP N+Q+
Sbjct:    1 EEVVTHPLVLLSIVDHYNRVARDTSKRVVGVLLGSTFHGKCDITNSFAVPFDEDLRNPGIWYLDHDFLENMYQMFKKINAKERIVGFYSSGPKIRKADLDIDDLFRRYCPNPVLVICDVRPSVEGLPTTAYGSVEEVEEDGKAIKRVFKHITSTVGAYEAEEVGVEHLLRDINDPSVSSLAGQVKHKMTALNGLKERLEEMKTYLENVVAGRLPPNHQI 219
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10711.568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQV6_ECTSI6.600e-16197.91MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z1W9_9STRA2.400e-12477.5026S proteasome non-ATPase regulatory subunit 7 n=1... [more]
A0A6S9JFQ0_HETAK6.540e-12277.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZZ4_9STRA3.000e-11577.98Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SA56_9STRA5.490e-11375.12Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2D4CCS2_PYTIN2.950e-11274.4326S proteasome non-ATPase regulatory subunit 7 n=2... [more]
A0A067D158_SAPPC1.310e-11173.66MPN domain-containing protein n=4 Tax=Saprolegniac... [more]
K3WRI7_GLOUD6.100e-11173.52MPN domain-containing protein n=1 Tax=Globisporang... [more]
A0A7S2H307_9STRA1.630e-11071.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
H3G7T3_PHYRM3.260e-11072.60MPN domain-containing protein n=17 Tax=Peronospora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10711contigE-fasciculatus_F_contig10711:158..4752 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score465.3
Seed ortholog evalue1.7e-128
Seed eggNOG ortholog2880.D7FQV6
Preferred namePSMD7
KEGG koko:K03038,ko:K08825,ko:K20306
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
GOsGO:0000003,GO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005819,GO:0005829,GO:0005838,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006955,GO:0007088,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0008541,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009791,GO:0009793,GO:0009896,GO:0009965,GO:0009987,GO:0010016,GO:0010154,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016192,GO:0016579,GO:0019538,GO:0019941,GO:0022414,GO:0022624,GO:0030071,GO:0030141,GO:0030163,GO:0030425,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034774,GO:0036211,GO:0036230,GO:0036477,GO:0042119,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044463,GO:0044464,GO:0045055,GO:0045087,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046903,GO:0046983,GO:0048316,GO:0048366,GO:0048367,GO:0048518,GO:0048522,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051233,GO:0051234,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060205,GO:0061458,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0072686,GO:0090068,GO:0097447,GO:0097458,GO:0097708,GO:0099402,GO:0099503,GO:0101002,GO:0120025,GO:0120038,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905392,GO:1905818,GO:1905820,GO:1990023,GO:2001252
EggNOG free text desc.proteasome-mediated ubiquitin-dependent protein catabolic process
EggNOG OGsCOG1310@1,KOG1556@2759
EC2.7.12.1
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03051,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionJAB1/MPN/MOV34 metalloenzyme domain
Ec32 orthologEc-02_003040.1
Exons7
Model size726
Cds size726
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927570.9917848-CDS-E-fasciculatus_F_contig10711:157..2651622927570.9917848-CDS-E-fasciculatus_F_contig10711:157..265Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 158..265 -
1695995601.2223613-CDS-E-fasciculatus_F_contig10711:157..2651695995601.2223613-CDS-E-fasciculatus_F_contig10711:157..265Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 158..265 -
1622927571.032734-CDS-E-fasciculatus_F_contig10711:744..8271622927571.032734-CDS-E-fasciculatus_F_contig10711:744..827Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 745..827 -
1695995601.2334774-CDS-E-fasciculatus_F_contig10711:744..8271695995601.2334774-CDS-E-fasciculatus_F_contig10711:744..827Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 745..827 -
1622927571.0461404-CDS-E-fasciculatus_F_contig10711:1292..14411622927571.0461404-CDS-E-fasciculatus_F_contig10711:1292..1441Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 1293..1441 -
1695995601.2418494-CDS-E-fasciculatus_F_contig10711:1292..14411695995601.2418494-CDS-E-fasciculatus_F_contig10711:1292..1441Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 1293..1441 -
1622927571.0593364-CDS-E-fasciculatus_F_contig10711:1825..19341622927571.0593364-CDS-E-fasciculatus_F_contig10711:1825..1934Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 1826..1934 -
1695995601.2505856-CDS-E-fasciculatus_F_contig10711:1825..19341695995601.2505856-CDS-E-fasciculatus_F_contig10711:1825..1934Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 1826..1934 -
1622927571.074751-CDS-E-fasciculatus_F_contig10711:2692..27631622927571.074751-CDS-E-fasciculatus_F_contig10711:2692..2763Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 2693..2763 -
1695995601.259892-CDS-E-fasciculatus_F_contig10711:2692..27631695995601.259892-CDS-E-fasciculatus_F_contig10711:2692..2763Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 2693..2763 -
1622927571.1318521-CDS-E-fasciculatus_F_contig10711:3292..34231622927571.1318521-CDS-E-fasciculatus_F_contig10711:3292..3423Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 3293..3423 -
1695995601.2689364-CDS-E-fasciculatus_F_contig10711:3292..34231695995601.2689364-CDS-E-fasciculatus_F_contig10711:3292..3423Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 3293..3423 -
1622927571.1469607-CDS-E-fasciculatus_F_contig10711:4677..47521622927571.1469607-CDS-E-fasciculatus_F_contig10711:4677..4752Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 4678..4752 -
1695995601.2793245-CDS-E-fasciculatus_F_contig10711:4677..47521695995601.2793245-CDS-E-fasciculatus_F_contig10711:4677..4752Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10711 4678..4752 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10711.568.1prot_E-fasciculatus_F_contig10711.568.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10711 158..4752 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10711.568.1

>prot_E-fasciculatus_F_contig10711.568.1 ID=prot_E-fasciculatus_F_contig10711.568.1|Name=mRNA_E-fasciculatus_F_contig10711.568.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=242bp
GGKDDKAKGGDAEVASVVVPKGIEEVVVHPLVLLSTVDHYNRVAKDAKKR
VVGVLLGSKYKGTVDVTNSFAVPFEEDPRNPNIWYLDHNFLEGMFAMFKK
VAAKERICGFYSTGPKIRENDLAIAELFKRFCPNPVYVIIDVRPDVEGIP
TTAYVTAEEVEADGKEIQKTFKHLASSVGALEAEEVGVEHLLRDINDPSV
SSLANQIKHKLSALSGLKSKLEEMQTYLKNVLDGKLPVNNQV
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mRNA from alignment at E-fasciculatus_F_contig10711:158..4752-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10711.568.1 ID=mRNA_E-fasciculatus_F_contig10711.568.1|Name=mRNA_E-fasciculatus_F_contig10711.568.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4595bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10711:158..4752- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGGGGGAAGGACGACAAGGCCAAGGGTGGGGACGCGGAAGTGGCATCGGT
TGTCGTGCCGAAGGGGATTGAGGAGGTGAGGACACGCGACAGCAGTACGT
CTAGTTGTTTGGTCGAGCTGACGCAGGTGTGGTGTGTCCATAATTCGCTC
GGGATTTGTGCGGGCGGTATGCATTTGAATGGTGGAACGATGGTGGGCAT
GAACAGCAGCAGGAGCGAGAGAAGCGGTGGGGGTGTCGCAGTGACATCCG
TGACTAGTCTTCGTCGCCTGGGCGGGCGTCCCGGATTTTAAAGGCTGTGG
CATCGATGGATGCAACCTCACCTAACGCACAGAGGGACGGCGAGCATACT
GAGCTAAGCTCACTCAGTTATAACGTAAAGTACCAGATACGTCTTGCATA
CGCGTCCAGACCGGACAGTCAAAACCGCATCGCACGGGGGCAGCAAACAG
TCCACGGTTGCCGACAAGATCGGTCTTCGAACATCCCGGACTCGTGCTAT
AGAAGGACTCGTGCTGTAGAAGCACTGCTGTTGTTTGCACCGCCGTGGCA
CGCCGAGCGTGCACCGAACGGTTGACCGGTAGATCTGACTGAACGTTAAC
CCCGGCAGGAACAGCAGCTATAGCCGACAATTAAGAGCCTACAGTAGCGT
GAATGCAAGCCGCTGGTTGATGGCTGAATGTGGAACTACTTGCTGCCCGT
AGGACTCGCCGGTCGTGAGGGAGATGCTTTGACGGCAGCGAGTGCATGCT
CACCTCTTTTTCGGTCGTGACTTGCAAGCCGCTTGCGTTTAGCGCACGGA
GAAGTGTGTCCCCAATTATCTGCCGGGAGATTCGAATGTGACTATCACAC
CCGAGAACTGTGATGAGCGTTCTGTAGACCTTGTCATCTACATAGGACGC
ACGTGTGTTTTATGAGCTCGACACCACATGCCAGGCCTCGACAACCCCGG
CTAGGCGAACAGCAACCATGCTGCCTGAGACACCAAGAAGATATCTCGGT
CTTCGTATATACTCGCGTCTGAATTTACGGCGGCTGTACATACTTCGGCC
GTCTGGTGTGGTCCACGTGGTTGGTCGTGGCGATTATCCCATGCCTTCAT
AAGCATTGGCTTCTGTGGTTTGGGTTTTGGGTCTGCTGAGTCGACATGTC
GGTGTCACCGCCACCCCCGGTAGACTCCCTCCTTCATTGCACCCAACCGT
TCCAGTACAAACTTCGAAAGGAACGCACACCTCACGCACCACTTTTTTCC
ACGAGAAAGGCCAGTCACCCTCCCCCCTCCACCCACCGAATTTTCTGGTG
CCCTTCCTCTCTCCCCTCCGCTTGTGAAGGTGGTAGTGCACCCCTTGGTG
CTCCTTTCCACGGTGGATCACTACAACCGGGTGGCAAAGGACGCGAAGAA
GCGGGTCGTGGGGGTACTGCTGGGGTCGAAGTACAAGGGCACCGTCGACG
TAACAAACAGGTACATACAAGTGCGTGTCGGCGTGATGACCCCTTCTTCC
CGATCGTCGCACTGACCGTACCGCATCTGATAGTCCCTTCTTTTTGTTTC
TTCTCGTGGAGAATTGGACTGTGGCCTTTCTCTCTCTCTGTCTGTCTGTC
TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTTTGTCTG
TTGGCTCTCGTTCTGTCTACGGTTGTCTCCTTCTCTCTCTCTCTACTCCG
TGGTTTTCTAGTGTTCTCTCTTCTCTCGATGTGTACACCTACCAGCCCTT
CCATCTGATGGGCCGAACAAGTTCGGTGGTGGTGATCGACCTCACTGCGC
CTGAGCATGCTGGTTGGGACGCATTTGCCTTTTTTCTGTCTGTGCTTCGC
CCGTTTTAAAGGGTGACATAAATCTCTCCCTCTCCCTCTCTCTCATTGTC
CGTCTCGCCCGTTTCTGACCTGATCTGGTGGTGTTTCACTACCCTCTCCT
GCTGCGACTACTGCGCAACCGCATCGTGATCATATTCAGCTTCGCGGTAC
CGTTCGAGGAGGACCCGCGCAACCCAAACATCTGGTACCTGGACCACAAC
TTCTTGGAAGGTATGCGTAGACCATGGTATGGTTTTCGGGGGGAGGTTGT
CCTGTCTTCGTAGCTTCCAGTGGTGTTGTAGTATAGGTACTGCCGCGGGC
AGGGATGTTGCCTGTGGTGTTTTTGAGCTCCCGTGCAATGTTCTGAAAAT
GTCTCCTTTTGAAGGCTTTCAGGGAACAAAACATGCTAAAGACGGACGGC
ATTGATCATTTGAAATACACGCTGCAGTTTATCGACCGCGCCTGGTTGTT
TCCTGTCGAGTACTTCGCCAACGCAACATCTCGAACAAAACCAATCGCTG
AAGTCGTCGCGCGACGAACGAAATCACACCTTGTTCTTGCAAGTGGTTAT
TCGACTGCACAAGAGCAAACGTAGGCGGTGTGCCACCTGATGTTCCAAAA
CCGTGTCGTTTGGCAAAATCCATGTACTTCGTATCCCACTTCATTCAGTT
TGGCTCGTTCCGGTTCCTACGCTGCTCGGAAAAGTAAACCTGAGGGTCAT
CATACGAGTCATCCTTCGAAATGCGTTAGAGTCGTACTTCGTCAACACAG
CATCGTACCACCAAAACAGTATCCAGGACGCTCTCGGCCAAACACCATGG
TGGCAAAAGTGGATGTTTGTTGAGCCTCGATTCCGAACGAAAAAGCTCGC
CTCCACCTACAGCATGTCGGGCTGTACGCACGCACGAGGCTCTCTCTTTT
GGGGGCAATTTTTTCGCCGCCGGTCCTCATTGTCCATCCACCCCCTTGTC
CGCCACGGTGTGCGCTAGGCATGTTCGCCATGTTCAAGAAGGTGGCGGCG
AAGGAGCGCATCTGCGGGTTCTACAGCACCGGCCCCAAGATCCGAGAGAA
CGATCTCGCCATCGCCGAGCTCTTCAAGTAAGACAGACGACACCGCAGAC
AACTTGCCCGTTTTTTATCTCAAGGCAGCCGGCATTGGGCCTGTTTATGT
GGCGCTTTTCTTGCCCGCGGTCCCGTTTCCAAGATGGTCGGCCGACCCTT
GATTTTCTCACGCTTCTCCCCTACCTTTCTCGGTCTGTCTCCCTGTCTCT
CTTGTCTGTCTGTACTCTCTGTCTGTCTGCACTCTCTGTCTGTCTGTCTC
TCCCTCTTCCTCTCTCTCTCTCTCTGTGCCCTGTTTTTCCTTCTCTCTCT
ACCTCTGTCTGTCTCTGCCCCCCCTCTATCTCTGTCTGCCACTCTTTTCC
CCTCTCTTTTTTCTCCCTGCTTGTCGTGGGTTCGTTTTTGTTTTTTTGTC
GGCCTTGCCAGACGCTTCTGTCCCAACCCAGTGTACGTGATCATCGACGT
ACGACCGGACGTAGAGGGCATCCCCACCACGGCCTACGTGACGGCGGAGG
AGGTAGAGGCTGACGGCAAGGAGATCCAAAAGACCTTCAAGCACCTCGCT
TCCAGCGTAGGTGAGAGTTGTTGCTGCTGTTGCCGTTCGCCTGTGGTGTG
GTTGGTTGATGGCGGTGGTGGTGGTGGTGTTTTATCGTTCATCTTTCATC
GTTCATCTCGCTCCAGGTTTGGGAGATGGTGGTTGTGGCTGTGGTTGTGG
TTGTGGTTGTTGTAATCGGCGTTGTGTTGGTTGTGGAGGCGGTCGTCGTC
CTCTTTGGTGTGGGTGGTACTGCTGCTGTTTCCACGGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCACCGTGATGT
TGTTGTGGTTGTAGCGGTGCGGCGGCGAGGACAAAGCTGATGTAGTGCTG
ACACTTTCTTCGTGACACCATGCCCGGAGCAAGGACCTCCCACGTAAGAC
ACAACACGTCTTCAAGTTGATCGGATATCTTTATCACCTTGCTAACAATG
TGTGGTATGAATATCAACGCAACAGGCGCCCTCGAGGCGGAGGAGGTCGG
GGTGGAACACCTTCTTCGCGACATCAACGACCCTTCGGTGTCGAGCTTGG
CCAATCAGGTATTAGCATTCGTCTTTGACCATTTTTTTTTCTTCACCGAA
TTGGCATTGTAGCGGTTCTGCCAACATTAGGTTGCACGCGTATCGGTCAT
TTGGGGGCGATGGTCACAAGTGCACGTGTGGCCACTTTTGTGTGTTTTTC
ATTTTCTGAGAGTTGTCGTGTCGTGGCTGGGGACATGGAGAAGGCCAGCA
CCATGTTCCGCTTATTTTTTCTCGCGTGATTGTCGTTAGTCGTCGACTCA
GACACAGAAGTGTGCGTGCGTCCAGGTGTTTCCTGCAGTGTCGCATGGTT
TTCTCTCCAGACGCGTCCGCAACACGCGTTGCACATTTTGGCTGTCTCGC
CGCAGCAGGTGCTGAAGGTGGCGCGTTTGTTTTGACGCGGGCCCTGTGCC
CGCATGGCTTCTCTGTCGTCTCGTTGTCGTCGACCAGGGGCGTTCGCTCA
CCCTCTCTTTTCCTCTGTCCCTCTCGTTGTGCTGCAGATCAAGCACAAGC
TCTCGGCGTTGAGCGGGCTCAAGTCGAAGCTGGAGGAGATGCAGACCTAT
CTGAAGAACGTTCTCGACGGGAAACTTCCCGTAAACAACCAGGTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10711:158..4752-

>mRNA_E-fasciculatus_F_contig10711.568.1 ID=mRNA_E-fasciculatus_F_contig10711.568.1|Name=mRNA_E-fasciculatus_F_contig10711.568.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1452bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10711:158..4752- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGGGGGAAGGACGACAAGGCCAAGGGTGGGGACGCGGAAGTGGCATCGGT
TGTCGTGCCGAAGGGGATTGAGGAGGGGGGGAAGGACGACAAGGCCAAGG
GTGGGGACGCGGAAGTGGCATCGGTTGTCGTGCCGAAGGGGATTGAGGAG
GTGGTAGTGCACCCCTTGGTGCTCCTTTCCACGGTGGATCACTACAACCG
GGTGGCAAAGGACGCGAAGAAGCGGGTCGTGGGGGTACTGCTGGGGTCGA
AGTACAAGGGCACCGTCGACGTAACAAACAGGTGGTAGTGCACCCCTTGG
TGCTCCTTTCCACGGTGGATCACTACAACCGGGTGGCAAAGGACGCGAAG
AAGCGGGTCGTGGGGGTACTGCTGGGGTCGAAGTACAAGGGCACCGTCGA
CGTAACAAACAGCTTCGCGGTACCGTTCGAGGAGGACCCGCGCAACCCAA
ACATCTGGTACCTGGACCACAACTTCTTGGAAGCTTCGCGGTACCGTTCG
AGGAGGACCCGCGCAACCCAAACATCTGGTACCTGGACCACAACTTCTTG
GAAGGCATGTTCGCCATGTTCAAGAAGGTGGCGGCGAAGGAGCGCATCTG
CGGGTTCTACAGCACCGGCCCCAAGATCCGAGAGAACGATCTCGCCATCG
CCGAGCTCTTCAAGCATGTTCGCCATGTTCAAGAAGGTGGCGGCGAAGGA
GCGCATCTGCGGGTTCTACAGCACCGGCCCCAAGATCCGAGAGAACGATC
TCGCCATCGCCGAGCTCTTCAAACGCTTCTGTCCCAACCCAGTGTACGTG
ATCATCGACGTACGACCGGACGTAGAGGGCATCCCCACCACGGCCTACGT
GACGGCGGAGGAGGTAGAGGCTGACGGCAAGGAGATCCAAAAGACCTTCA
AGCACCTCGCTTCCAGCGTAGACGCTTCTGTCCCAACCCAGTGTACGTGA
TCATCGACGTACGACCGGACGTAGAGGGCATCCCCACCACGGCCTACGTG
ACGGCGGAGGAGGTAGAGGCTGACGGCAAGGAGATCCAAAAGACCTTCAA
GCACCTCGCTTCCAGCGTAGGCGCCCTCGAGGCGGAGGAGGTCGGGGTGG
AACACCTTCTTCGCGACATCAACGACCCTTCGGTGTCGAGCTTGGCCAAT
CAGGCGCCCTCGAGGCGGAGGAGGTCGGGGTGGAACACCTTCTTCGCGAC
ATCAACGACCCTTCGGTGTCGAGCTTGGCCAATCAGATCAAGCACAAGCT
CTCGGCGTTGAGCGGGCTCAAGTCGAAGCTGGAGGAGATGCAGACCTATC
TGAAGAACGTTCTCGACGGGAAACTTCCCGTAAACAACCAGGTGATCAAG
CACAAGCTCTCGGCGTTGAGCGGGCTCAAGTCGAAGCTGGAGGAGATGCA
GACCTATCTGAAGAACGTTCTCGACGGGAAACTTCCCGTAAACAACCAGG
TG
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